RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 WDR4P57081 412 aaKnown RBP6.38□□□□□ -1.39
HMGB1P35-201ENST00000503360 BAP1Q92560 729 aa6.38□□□□□ -1.39
HMGB1P35-201ENST00000503360 C6orf229H3BNL8 230 aa6.37□□□□□ -1.39
HMGB1P35-201ENST00000503360 TULP1O00294 542 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P35-201ENST00000503360 NR5A1Q13285 461 aa6.37□□□□□ -1.39
HMGB1P35-201ENST00000503360 CCDC102AQ96A19 550 aa6.37□□□□□ -1.39
HMGB1P35-201ENST00000503360 PURBQ96QR8 312 aaKnown RBP6.37□□□□□ -1.39
HMGB1P35-201ENST00000503360 TLL2Q9Y6L7 1015 aa6.37□□□□□ -1.39
HMGB1P35-201ENST00000503360 TMEM151AQ8N4L1 468 aa6.36□□□□□ -1.39
HMGB1P35-201ENST00000503360 MAN1A2O60476 641 aa6.35□□□□□ -1.39
HMGB1P35-201ENST00000503360 PPFIA3O75145 1194 aa6.35□□□□□ -1.39
HMGB1P35-201ENST00000503360 SPTLC1O15269 473 aa6.34□□□□□ -1.39
HMGB1P35-201ENST00000503360 MTMR2Q13614 643 aa6.34□□□□□ -1.39
HMGB1P35-201ENST00000503360 LINC01559Q495D7 138 aa6.34□□□□□ -1.39
HMGB1P35-201ENST00000503360 LYPD8Q6UX82 237 aa6.34□□□□□ -1.39
HMGB1P35-201ENST00000503360 PRR7Q8TB68 274 aa6.34□□□□□ -1.39
HMGB1P35-201ENST00000503360 RASSF7Q02833 373 aa6.33□□□□□ -1.4
HMGB1P35-201ENST00000503360 DIXDC1Q155Q3 683 aa6.33□□□□□ -1.4
HMGB1P35-201ENST00000503360 KCTD17Q8N5Z5 321 aa6.33□□□□□ -1.4
HMGB1P35-201ENST00000503360 MEIOBQ8N635 442 aa6.33□□□□□ -1.4
HMGB1P35-201ENST00000503360 KRI1Q8N9T8 703 aaKnown RBP6.33□□□□□ -1.4
HMGB1P35-201ENST00000503360 SPIRE2Q8WWL2 714 aa6.33□□□□□ -1.4
HMGB1P35-201ENST00000503360 SOS2Q07890 1332 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P35-201ENST00000503360 UPP2O95045 317 aa6.32□□□□□ -1.4
HMGB1P35-201ENST00000503360 GDF11O95390 407 aa6.32□□□□□ -1.4
HMGB1P35-201ENST00000503360 ZIC2O95409 532 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P35-201ENST00000503360 IGHA1P01876 353 aa6.32□□□□□ -1.4
HMGB1P35-201ENST00000503360 NANOS1Q8WY41 292 aaKnown RBP6.32□□□□□ -1.4
HMGB1P35-201ENST00000503360 SSTR3P32745 418 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P35-201ENST00000503360 MAP4K5Q9Y4K4 846 aa6.31□□□□□ -1.4
HMGB1P35-201ENST00000503360 MOXD2PA6NHM9 499 aa6.3□□□□□ -1.4
HMGB1P35-201ENST00000503360 F12P00748 615 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P35-201ENST00000503360 GRM5P41594 1212 aa6.3□□□□□ -1.4
HMGB1P35-201ENST00000503360 PLCB2Q00722 1185 aa6.3□□□□□ -1.4
HMGB1P35-201ENST00000503360 BPHLQ86WA6 291 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P35-201ENST00000503360 ITPKCQ96DU7 683 aa6.3□□□□□ -1.4
HMGB1P35-201ENST00000503360 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
HMGB1P35-201ENST00000503360 FOXK2Q01167 660 aa6.29□□□□□ -1.4
HMGB1P35-201ENST00000503360 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.29□□□□□ -1.4
HMGB1P35-201ENST00000503360 LINC00528Q8N1L1 170 aa6.29□□□□□ -1.4
HMGB1P35-201ENST00000503360 TSEN34Q9BSV6 310 aaKnown RBP6.29□□□□□ -1.4
HMGB1P35-201ENST00000503360 ADAMTS8Q9UP79 889 aa6.29□□□□□ -1.4
HMGB1P35-201ENST00000503360 NR3C2P08235 984 aa6.28□□□□□ -1.4
HMGB1P35-201ENST00000503360 AMHR2Q16671 573 aa6.28□□□□□ -1.4
HMGB1P35-201ENST00000503360 PRPF38BQ5VTL8 546 aaKnown RBP6.28□□□□□ -1.4
HMGB1P35-201ENST00000503360 ARMC2Q8NEN0 867 aa6.28□□□□□ -1.4
HMGB1P35-201ENST00000503360 C1QTNF2Q9BXJ5 285 aa6.28□□□□□ -1.4
HMGB1P35-201ENST00000503360 ZFAND3Q9H8U3 227 aa6.28□□□□□ -1.4
HMGB1P35-201ENST00000503360 DNMT3AQ9Y6K1 912 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P35-201ENST00000503360 BMP2P12643 396 aa6.27□□□□□ -1.41
HMGB1P35-201ENST00000503360 NDUFV2P19404 249 aa6.27□□□□□ -1.41
HMGB1P35-201ENST00000503360 KRT76Q01546 638 aa6.27□□□□□ -1.41
HMGB1P35-201ENST00000503360 TRMT44Q8IYL2 757 aaKnown RBP6.27□□□□□ -1.41
HMGB1P35-201ENST00000503360 DNMT3LQ9UJW3 386 aa6.27□□□□□ -1.41
HMGB1P35-201ENST00000503360 EMILIN1Q9Y6C2 1016 aa6.27□□□□□ -1.41
HMGB1P35-201ENST00000503360 SLURP2P0DP57 97 aa6.26□□□□□ -1.41
HMGB1P35-201ENST00000503360 CTHP32929 405 aa6.26□□□□□ -1.41
HMGB1P35-201ENST00000503360 C6orf118Q5T5N4 469 aa6.26□□□□□ -1.41
HMGB1P35-201ENST00000503360 KANK3Q6NY19 840 aa6.26□□□□□ -1.41
HMGB1P35-201ENST00000503360 FOXJ1Q92949 421 aa6.26□□□□□ -1.41
HMGB1P35-201ENST00000503360 RSBN1LQ6PCB5 846 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P35-201ENST00000503360 SH3RF1Q7Z6J0 888 aa6.25□□□□□ -1.41
HMGB1P35-201ENST00000503360 ARHGEF15O94989 841 aa6.24□□□□□ -1.41
HMGB1P35-201ENST00000503360 ARID5BQ14865 1188 aa6.24□□□□□ -1.41
HMGB1P35-201ENST00000503360 C4orf48Q5BLP8 95 aa6.24□□□□□ -1.41
HMGB1P35-201ENST00000503360 GPR161Q8N6U8 529 aaKnown RBP6.24□□□□□ -1.41
HMGB1P35-201ENST00000503360 GPKOWQ92917 476 aaPredicted RBP eCLIP6.24□□□□□ -1.41
HMGB1P35-201ENST00000503360 ZBTB3Q9H5J0 574 aa6.24□□□□□ -1.41
HMGB1P35-201ENST00000503360 TTLL8A6PVC2 850 aa6.23□□□□□ -1.41
HMGB1P35-201ENST00000503360 TUSC1Q2TAM9 212 aa6.23□□□□□ -1.41
HMGB1P35-201ENST00000503360 ZNF385CQ66K41 422 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P35-201ENST00000503360 CNTNAP3BQ96NU0 1288 aa6.23□□□□□ -1.41
HMGB1P35-201ENST00000503360 CNTNAP3Q9BZ76 1288 aa6.23□□□□□ -1.41
HMGB1P35-201ENST00000503360 CFAP99D6REC4 459 aa6.22□□□□□ -1.41
HMGB1P35-201ENST00000503360 PTSQ03393 145 aa6.22□□□□□ -1.41
HMGB1P35-201ENST00000503360 NBPF14Q5TI25 921 aa6.22□□□□□ -1.41
HMGB1P35-201ENST00000503360 Q6ZVU0 165 aa6.22□□□□□ -1.41
HMGB1P35-201ENST00000503360 COL25A1Q9BXS0 654 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P35-201ENST00000503360 MAP10Q9P2G4 905 aa6.22□□□□□ -1.41
HMGB1P35-201ENST00000503360 SPINT1O43278 529 aa6.21□□□□□ -1.42
HMGB1P35-201ENST00000503360 HRCP23327 699 aa6.21□□□□□ -1.42
HMGB1P35-201ENST00000503360 AGERQ15109 404 aa6.21□□□□□ -1.42
HMGB1P35-201ENST00000503360 CCDC116Q8IYX3 515 aa6.21□□□□□ -1.42
HMGB1P35-201ENST00000503360 SCARF2Q96GP6 870 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P35-201ENST00000503360 BEGAINQ9BUH8 593 aa6.21□□□□□ -1.42
HMGB1P35-201ENST00000503360 TBC1D2Q9BYX2 928 aa6.21□□□□□ -1.42
HMGB1P35-201ENST00000503360 SLC35F4A4IF30 521 aa6.2□□□□□ -1.42
HMGB1P35-201ENST00000503360 TTLL12Q14166 644 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P35-201ENST00000503360 GIGYF2Q6Y7W6 1299 aaKnown RBP6.2□□□□□ -1.42
HMGB1P35-201ENST00000503360 BARGINQ6ZT62 677 aa6.2□□□□□ -1.42
HMGB1P35-201ENST00000503360 SH3BP5LQ7L8J4 393 aa6.2□□□□□ -1.42
HMGB1P35-201ENST00000503360 CCDC155Q8N6L0 562 aa6.2□□□□□ -1.42
HMGB1P35-201ENST00000503360 CDV3Q9UKY7 258 aaKnown RBP6.2□□□□□ -1.42
HMGB1P35-201ENST00000503360 ITGA6P23229 1130 aa6.19□□□□□ -1.42
HMGB1P35-201ENST00000503360 FSHRP23945 695 aa6.19□□□□□ -1.42
HMGB1P35-201ENST00000503360 SVOPQ8N4V2 548 aa6.19□□□□□ -1.42
HMGB1P35-201ENST00000503360 PGPEP1Q9NXJ5 209 aa6.19□□□□□ -1.42
HMGB1P35-201ENST00000503360 VASH1Q7L8A9 365 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P35-201ENST00000503360 PCDHB15Q9Y5E8 787 aa6.18□□□□□ -1.42
HMGB1P35-201ENST00000503360 SLC24A1O60721 1099 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms