RNA–Protein interactions for RNA: ENST00000502804.2

CXCL1P1-201, Transcript of C-X-C motif chemokine ligand 1 pseudogene 1, humanhuman

BASIC

Gene CXCL1P1, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P1-201ENST00000502804 USP6P35125 1406 aa23.71■■□□□ 1.39
CXCL1P1-201ENST00000502804 PLEKHG5O94827 1062 aa23.7■■□□□ 1.38
CXCL1P1-201ENST00000502804 HAP1P54257 671 aaPredicted RBP23.7■■□□□ 1.38
CXCL1P1-201ENST00000502804 CABLES1Q8TDN4 633 aa23.69■■□□□ 1.38
CXCL1P1-201ENST00000502804 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
CXCL1P1-201ENST00000502804 CPSF1Q10570 1443 aaKnown RBP23.68■■□□□ 1.38
CXCL1P1-201ENST00000502804 NINLQ9Y2I6 1382 aa23.67■■□□□ 1.38
CXCL1P1-201ENST00000502804 HDGFL2Q7Z4V5 671 aaPredicted RBP23.67■■□□□ 1.38
CXCL1P1-201ENST00000502804 ABTB2Q8N961 1025 aa23.67■■□□□ 1.38
CXCL1P1-201ENST00000502804 C8orf37Q96NL8 207 aa23.67■■□□□ 1.38
CXCL1P1-201ENST00000502804 KTN1Q86UP2 1357 aaKnown RBP23.66■■□□□ 1.38
CXCL1P1-201ENST00000502804 TERF2IPQ9NYB0 399 aa23.66■■□□□ 1.38
CXCL1P1-201ENST00000502804 AKAP12Q02952 1782 aa23.65■■□□□ 1.38
CXCL1P1-201ENST00000502804 NGLY1Q96IV0 654 aa23.65■■□□□ 1.38
CXCL1P1-201ENST00000502804 RGS17Q9UGC6 210 aaPredicted RBP23.65■■□□□ 1.38
CXCL1P1-201ENST00000502804 NUTM2GQ5VZR2 741 aa23.64■■□□□ 1.37
CXCL1P1-201ENST00000502804 SSH2Q76I76 1423 aa23.64■■□□□ 1.37
CXCL1P1-201ENST00000502804 CD163L1Q9NR16 1453 aa23.63■■□□□ 1.37
CXCL1P1-201ENST00000502804 AFF2P51816 1311 aa23.62■■□□□ 1.37
CXCL1P1-201ENST00000502804 TTC21BQ7Z4L5 1316 aa23.62■■□□□ 1.37
CXCL1P1-201ENST00000502804 ZNF772Q68DY9 489 aaPredicted RBP23.62■■□□□ 1.37
CXCL1P1-201ENST00000502804 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
CXCL1P1-201ENST00000502804 A0A1W2PP64 1363 aa23.61■■□□□ 1.37
CXCL1P1-201ENST00000502804 ABCA3Q99758 1704 aa23.61■■□□□ 1.37
CXCL1P1-201ENST00000502804 TTC21AQ8NDW8 1320 aa23.6■■□□□ 1.37
CXCL1P1-201ENST00000502804 MON2Q7Z3U7 1717 aa23.59■■□□□ 1.37
CXCL1P1-201ENST00000502804 MARF1Q9Y4F3 1742 aaKnown RBP23.59■■□□□ 1.37
CXCL1P1-201ENST00000502804 NLRP6P59044 892 aa23.59■■□□□ 1.37
CXCL1P1-201ENST00000502804 NRKQ7Z2Y5 1582 aa23.57■■□□□ 1.36
CXCL1P1-201ENST00000502804 ANKRD36BQ8N2N9 1353 aa23.57■■□□□ 1.36
CXCL1P1-201ENST00000502804 CRYBG1Q9Y4K1 1723 aa23.57■■□□□ 1.36
CXCL1P1-201ENST00000502804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.57■■□□□ 1.36
CXCL1P1-201ENST00000502804 FNBP4Q8N3X1 1017 aaPredicted RBP23.57■■□□□ 1.36
CXCL1P1-201ENST00000502804 POLR3GLQ9BT43 218 aa23.57■■□□□ 1.36
CXCL1P1-201ENST00000502804 EDC4Q6P2E9 1401 aaKnown RBP23.57■■□□□ 1.36
CXCL1P1-201ENST00000502804 POTEAQ6S8J7 498 aa23.56■■□□□ 1.36
CXCL1P1-201ENST00000502804 USP19O94966 1318 aa23.56■■□□□ 1.36
CXCL1P1-201ENST00000502804 USP21Q9UK80 565 aa23.55■■□□□ 1.36
CXCL1P1-201ENST00000502804 PIK3C2AO00443 1686 aa23.54■■□□□ 1.36
CXCL1P1-201ENST00000502804 PHRF1Q9P1Y6 1649 aaKnown RBP23.54■■□□□ 1.36
CXCL1P1-201ENST00000502804 FAM83GA6ND36 823 aa23.52■■□□□ 1.36
CXCL1P1-201ENST00000502804 GCP02774 474 aa23.52■■□□□ 1.36
CXCL1P1-201ENST00000502804 ILDR2Q71H61 639 aa23.52■■□□□ 1.36
CXCL1P1-201ENST00000502804 NME9Q86XW9 330 aa23.51■■□□□ 1.35
CXCL1P1-201ENST00000502804 PRDM11Q9NQV5 511 aa23.51■■□□□ 1.35
CXCL1P1-201ENST00000502804 MYOM1P52179 1685 aa23.51■■□□□ 1.35
CXCL1P1-201ENST00000502804 SLIT2O94813 1529 aa23.5■■□□□ 1.35
CXCL1P1-201ENST00000502804 C11orf95C9JLR9 678 aaPredicted RBP23.5■■□□□ 1.35
CXCL1P1-201ENST00000502804 ZC3H6P61129 1189 aaKnown RBP23.5■■□□□ 1.35
CXCL1P1-201ENST00000502804 QTRT2Q9H974 415 aaKnown RBP23.5■■□□□ 1.35
CXCL1P1-201ENST00000502804 KIAA0232Q92628 1395 aa23.5■■□□□ 1.35
CXCL1P1-201ENST00000502804 USP31Q70CQ4 1352 aa23.49■■□□□ 1.35
CXCL1P1-201ENST00000502804 BCL9LQ86UU0 1499 aa23.49■■□□□ 1.35
CXCL1P1-201ENST00000502804 SLIT3O75094 1523 aa23.49■■□□□ 1.35
CXCL1P1-201ENST00000502804 UNC5CLQ8IV45 518 aa23.48■■□□□ 1.35
CXCL1P1-201ENST00000502804 TRPC5Q9UL62 973 aaPredicted RBP23.48■■□□□ 1.35
CXCL1P1-201ENST00000502804 KCNH5Q8NCM2 988 aa23.47■■□□□ 1.35
CXCL1P1-201ENST00000502804 ZRANB1Q9UGI0 708 aa23.47■■□□□ 1.35
CXCL1P1-201ENST00000502804 COL14A1Q05707 1796 aaKnown RBP23.47■■□□□ 1.35
CXCL1P1-201ENST00000502804 CPDO75976 1380 aa23.46■■□□□ 1.35
CXCL1P1-201ENST00000502804 RXRBP28702 533 aa23.46■■□□□ 1.35
CXCL1P1-201ENST00000502804 PLCH1Q4KWH8 1693 aa23.46■■□□□ 1.35
CXCL1P1-201ENST00000502804 CHRNA2Q15822 529 aa23.45■■□□□ 1.34
CXCL1P1-201ENST00000502804 BTG4Q9NY30 223 aa23.45■■□□□ 1.34
CXCL1P1-201ENST00000502804 KIF7Q2M1P5 1343 aa23.44■■□□□ 1.34
CXCL1P1-201ENST00000502804 NWD2Q9ULI1 1742 aa23.44■■□□□ 1.34
CXCL1P1-201ENST00000502804 ATRNO75882 1429 aa23.43■■□□□ 1.34
CXCL1P1-201ENST00000502804 SOX12O15370 315 aa23.43■■□□□ 1.34
CXCL1P1-201ENST00000502804 ZEB1P37275 1124 aaPredicted RBP23.43■■□□□ 1.34
CXCL1P1-201ENST00000502804 RBM6P78332 1123 aaKnown RBP23.43■■□□□ 1.34
CXCL1P1-201ENST00000502804 CARD14Q9BXL6 1004 aa23.43■■□□□ 1.34
CXCL1P1-201ENST00000502804 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
CXCL1P1-201ENST00000502804 USP54Q70EL1 1684 aa23.42■■□□□ 1.34
CXCL1P1-201ENST00000502804 ZBTB7CA1YPR0 619 aa23.42■■□□□ 1.34
CXCL1P1-201ENST00000502804 COG3Q96JB2 828 aa23.42■■□□□ 1.34
CXCL1P1-201ENST00000502804 NSD3Q9BZ95 1437 aa23.42■■□□□ 1.34
CXCL1P1-201ENST00000502804 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
CXCL1P1-201ENST00000502804 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
CXCL1P1-201ENST00000502804 FYB1O15117 783 aa23.4■■□□□ 1.34
CXCL1P1-201ENST00000502804 VPS72Q15906 364 aa23.39■■□□□ 1.33
CXCL1P1-201ENST00000502804 GJD4Q96KN9 370 aaPredicted RBP23.39■■□□□ 1.33
CXCL1P1-201ENST00000502804 PANK3Q9H999 370 aa23.39■■□□□ 1.33
CXCL1P1-201ENST00000502804 ARHGEF25Q86VW2 580 aa23.38■■□□□ 1.33
CXCL1P1-201ENST00000502804 GGNBP2Q9H3C7 697 aa23.38■■□□□ 1.33
CXCL1P1-201ENST00000502804 CCDC9Q9Y3X0 531 aaKnown RBP23.38■■□□□ 1.33
CXCL1P1-201ENST00000502804 NFAT5O94916 1531 aa23.38■■□□□ 1.33
CXCL1P1-201ENST00000502804 NRAPQ86VF7 1730 aa23.37■■□□□ 1.33
CXCL1P1-201ENST00000502804 AATKQ6ZMQ8 1374 aa23.37■■□□□ 1.33
CXCL1P1-201ENST00000502804 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
CXCL1P1-201ENST00000502804 CGNL1Q0VF96 1302 aa23.35■■□□□ 1.33
CXCL1P1-201ENST00000502804 EVA1CP58658 441 aa23.35■■□□□ 1.33
CXCL1P1-201ENST00000502804 STRN4Q9NRL3 753 aa23.35■■□□□ 1.33
CXCL1P1-201ENST00000502804 CDK12Q9NYV4 1490 aaPredicted RBP23.35■■□□□ 1.33
CXCL1P1-201ENST00000502804 LMO7Q8WWI1 1683 aa23.35■■□□□ 1.33
CXCL1P1-201ENST00000502804 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
CXCL1P1-201ENST00000502804 WASHC2AQ641Q2 1341 aa23.34■■□□□ 1.33
CXCL1P1-201ENST00000502804 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
CXCL1P1-201ENST00000502804 GLI3P10071 1580 aa23.31■■□□□ 1.32
CXCL1P1-201ENST00000502804 AXIN2Q9Y2T1 843 aa23.3■■□□□ 1.32
CXCL1P1-201ENST00000502804 SPATA31A5Q5VU36 1347 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms