RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CRYBG1Q9Y4K1 1723 aa23.38■■□□□ 1.33
HDAC6-236ENST00000498808 DLC1Q96QB1 1528 aa23.37■■□□□ 1.33
HDAC6-236ENST00000498808 EZH2Q15910 746 aaKnown RBP23.36■■□□□ 1.33
HDAC6-236ENST00000498808 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
HDAC6-236ENST00000498808 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.32
HDAC6-236ENST00000498808 GPRASP1Q5JY77 1395 aa23.32■■□□□ 1.32
HDAC6-236ENST00000498808 CAMKK2Q96RR4 588 aa23.32■■□□□ 1.32
HDAC6-236ENST00000498808 POGKQ9P215 609 aa23.32■■□□□ 1.32
HDAC6-236ENST00000498808 HIRIP3Q9BW71 556 aaPredicted RBP23.3■■□□□ 1.32
HDAC6-236ENST00000498808 ADGRB1O14514 1584 aa23.29■■□□□ 1.32
HDAC6-236ENST00000498808 TRIM37O94972 964 aa23.29■■□□□ 1.32
HDAC6-236ENST00000498808 PRDM11Q9NQV5 511 aa23.29■■□□□ 1.32
HDAC6-236ENST00000498808 TULP4Q9NRJ4 1543 aa23.28■■□□□ 1.32
HDAC6-236ENST00000498808 SPATA31A1Q5TZJ5 1347 aa23.28■■□□□ 1.32
HDAC6-236ENST00000498808 RREB1Q92766 1687 aa23.26■■□□□ 1.31
HDAC6-236ENST00000498808 FAM196AQ6ZSG2 479 aa23.26■■□□□ 1.31
HDAC6-236ENST00000498808 MINK1Q8N4C8 1332 aaPredicted RBP23.26■■□□□ 1.31
HDAC6-236ENST00000498808 EIF3AQ14152 1382 aaKnown RBP23.25■■□□□ 1.31
HDAC6-236ENST00000498808 PARD3Q8TEW0 1356 aa23.25■■□□□ 1.31
HDAC6-236ENST00000498808 KIAA0232Q92628 1395 aa23.25■■□□□ 1.31
HDAC6-236ENST00000498808 TRAK1Q9UPV9 953 aa23.24■■□□□ 1.31
HDAC6-236ENST00000498808 PHRF1Q9P1Y6 1649 aaKnown RBP23.23■■□□□ 1.31
HDAC6-236ENST00000498808 NUP188Q5SRE5 1749 aa23.23■■□□□ 1.31
HDAC6-236ENST00000498808 PAK3O75914 559 aaPredicted RBP23.23■■□□□ 1.31
HDAC6-236ENST00000498808 APBA3O96018 575 aa23.23■■□□□ 1.31
HDAC6-236ENST00000498808 CHRNA2Q15822 529 aa23.23■■□□□ 1.31
HDAC6-236ENST00000498808 WASLO00401 505 aaPredicted RBP23.22■■□□□ 1.31
HDAC6-236ENST00000498808 NGDNQ8NEJ9 315 aaKnown RBP23.22■■□□□ 1.31
HDAC6-236ENST00000498808 YY1P25490 414 aa23.21■■□□□ 1.31
HDAC6-236ENST00000498808 STRN4Q9NRL3 753 aa23.21■■□□□ 1.31
HDAC6-236ENST00000498808 ATP7BP35670 1465 aa23.17■■□□□ 1.3
HDAC6-236ENST00000498808 ITSN1Q15811 1721 aa23.16■■□□□ 1.3
HDAC6-236ENST00000498808 ZC3H6P61129 1189 aaKnown RBP23.16■■□□□ 1.3
HDAC6-236ENST00000498808 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
HDAC6-236ENST00000498808 SSH2Q76I76 1423 aa23.16■■□□□ 1.3
HDAC6-236ENST00000498808 BARGINQ6ZT62 677 aa23.15■■□□□ 1.3
HDAC6-236ENST00000498808 PDE3BQ13370 1112 aa23.13■■□□□ 1.29
HDAC6-236ENST00000498808 NBPF8Q3BBV2 869 aa23.13■■□□□ 1.29
HDAC6-236ENST00000498808 NBPF14Q5TI25 921 aa23.13■■□□□ 1.29
HDAC6-236ENST00000498808 NUTM2GQ5VZR2 741 aa23.13■■□□□ 1.29
HDAC6-236ENST00000498808 CAMTA1Q9Y6Y1 1673 aa23.13■■□□□ 1.29
HDAC6-236ENST00000498808 NRKQ7Z2Y5 1582 aa23.11■■□□□ 1.29
HDAC6-236ENST00000498808 NUDT16Q96DE0 195 aaKnown RBP23.11■■□□□ 1.29
HDAC6-236ENST00000498808 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
HDAC6-236ENST00000498808 LMO7Q8WWI1 1683 aa23.1■■□□□ 1.29
HDAC6-236ENST00000498808 LARP1Q6PKG0 1096 aaKnown RBP23.1■■□□□ 1.29
HDAC6-236ENST00000498808 SPON1Q9HCB6 807 aa23.1■■□□□ 1.29
HDAC6-236ENST00000498808 EVA1CP58658 441 aa23.09■■□□□ 1.29
HDAC6-236ENST00000498808 KCNQ2O43526 872 aa23.08■■□□□ 1.29
HDAC6-236ENST00000498808 TCP11L2Q8N4U5 519 aa23.08■■□□□ 1.29
HDAC6-236ENST00000498808 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.29
HDAC6-236ENST00000498808 TOPAZ1Q8N9V7 1692 aa23.07■■□□□ 1.28
HDAC6-236ENST00000498808 POLR3AO14802 1390 aaPredicted RBP23.07■■□□□ 1.28
HDAC6-236ENST00000498808 NINLQ9Y2I6 1382 aa23.07■■□□□ 1.28
HDAC6-236ENST00000498808 KDM2AQ9Y2K7 1162 aa23.07■■□□□ 1.28
HDAC6-236ENST00000498808 PARP4Q9UKK3 1724 aaKnown RBP23.06■■□□□ 1.28
HDAC6-236ENST00000498808 CPDO75976 1380 aa23.05■■□□□ 1.28
HDAC6-236ENST00000498808 DCAF11Q8TEB1 546 aa23.04■■□□□ 1.28
HDAC6-236ENST00000498808 ACEP12821 1306 aa23.04■■□□□ 1.28
HDAC6-236ENST00000498808 PEAK1Q9H792 1746 aa23.03■■□□□ 1.28
HDAC6-236ENST00000498808 USP19O94966 1318 aa23.03■■□□□ 1.28
HDAC6-236ENST00000498808 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
HDAC6-236ENST00000498808 THRAP3Q9Y2W1 955 aaKnown RBP23.02■■□□□ 1.28
HDAC6-236ENST00000498808 RGPD3A6NKT7 1758 aaPredicted RBP23.01■■□□□ 1.27
HDAC6-236ENST00000498808 RGPD4Q7Z3J3 1758 aa23.01■■□□□ 1.27
HDAC6-236ENST00000498808 COL5A2P05997 1499 aaPredicted RBP23.01■■□□□ 1.27
HDAC6-236ENST00000498808 CASZ1Q86V15 1759 aa23■■□□□ 1.27
HDAC6-236ENST00000498808 ABTB2Q8N961 1025 aa23■■□□□ 1.27
HDAC6-236ENST00000498808 ANO8Q9HCE9 1232 aaPredicted RBP23■■□□□ 1.27
HDAC6-236ENST00000498808 SBF2Q86WG5 1849 aa22.99■■□□□ 1.27
HDAC6-236ENST00000498808 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
HDAC6-236ENST00000498808 OVOS2A0A0G2JMS6 1433 aa22.99■■□□□ 1.27
HDAC6-236ENST00000498808 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
HDAC6-236ENST00000498808 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
HDAC6-236ENST00000498808 PLEKHG3A1L390 1219 aa22.98■■□□□ 1.27
HDAC6-236ENST00000498808 CCDC61Q9Y6R9 512 aa22.98■■□□□ 1.27
HDAC6-236ENST00000498808 LRRC37A3O60309 1634 aa22.97■■□□□ 1.27
HDAC6-236ENST00000498808 C11orf95C9JLR9 678 aaPredicted RBP22.96■■□□□ 1.27
HDAC6-236ENST00000498808 PLSCR1O15162 318 aa22.96■■□□□ 1.27
HDAC6-236ENST00000498808 GCP02774 474 aa22.96■■□□□ 1.27
HDAC6-236ENST00000498808 CRB1P82279 1406 aa22.96■■□□□ 1.27
HDAC6-236ENST00000498808 STAC3Q96MF2 364 aa22.95■■□□□ 1.26
HDAC6-236ENST00000498808 RAB3GAP2Q9H2M9 1393 aa22.95■■□□□ 1.26
HDAC6-236ENST00000498808 PTF1AQ7RTS3 328 aa22.94■■□□□ 1.26
HDAC6-236ENST00000498808 PDGFDQ9GZP0 370 aaPredicted RBP22.94■■□□□ 1.26
HDAC6-236ENST00000498808 NLRP13Q86W25 1043 aa22.93■■□□□ 1.26
HDAC6-236ENST00000498808 MYOM1P52179 1685 aa22.92■■□□□ 1.26
HDAC6-236ENST00000498808 PROM2Q8N271 834 aa22.9■■□□□ 1.26
HDAC6-236ENST00000498808 PTGER2P43116 358 aa22.89■■□□□ 1.25
HDAC6-236ENST00000498808 DDB1Q16531 1140 aa22.89■■□□□ 1.25
HDAC6-236ENST00000498808 BCL11BQ9C0K0 894 aaPredicted RBP22.89■■□□□ 1.25
HDAC6-236ENST00000498808 WNK3Q9BYP7 1800 aa22.89■■□□□ 1.25
HDAC6-236ENST00000498808 ZBTB7AO95365 584 aa22.88■■□□□ 1.25
HDAC6-236ENST00000498808 ZNF784Q8NCA9 323 aaPredicted RBP22.88■■□□□ 1.25
HDAC6-236ENST00000498808 PPIP5K1Q6PFW1 1433 aa22.88■■□□□ 1.25
HDAC6-236ENST00000498808 AATKQ6ZMQ8 1374 aa22.88■■□□□ 1.25
HDAC6-236ENST00000498808 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
HDAC6-236ENST00000498808 UTRNP46939 3433 aa22.87■■□□□ 1.25
HDAC6-236ENST00000498808 SLIT3O75094 1523 aa22.87■■□□□ 1.25
HDAC6-236ENST00000498808 COL18A1P39060 1754 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms