RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, human

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDKN2A-208	ENST00000498124	CDK19	Q9BWU1	502 aa		32.71	■■■□□ 2.83
CDKN2A-208	ENST00000498124	POLR3A	O14802	1390 aa	Predicted RBP	32.69	■■■□□ 2.82
CDKN2A-208	ENST00000498124	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.67	■■■□□ 2.82
CDKN2A-208	ENST00000498124	SRCAP	Q6ZRS2	3230 aa		32.66	■■■□□ 2.82
CDKN2A-208	ENST00000498124	ONECUT3	O60422	494 aa	Predicted RBP	32.66	■■■□□ 2.82
CDKN2A-208	ENST00000498124	PAK3	O75914	559 aa	Predicted RBP	32.65	■■■□□ 2.82
CDKN2A-208	ENST00000498124	SEPT12	Q8IYM1	358 aa		32.65	■■■□□ 2.82
CDKN2A-208	ENST00000498124	BTG4	Q9NY30	223 aa		32.63	■■■□□ 2.81
CDKN2A-208	ENST00000498124	QRICH2	Q9H0J4	1663 aa		32.62	■■■□□ 2.81
CDKN2A-208	ENST00000498124	L3MBTL2	Q969R5	705 aa		32.62	■■■□□ 2.81
CDKN2A-208	ENST00000498124	ACE	P12821	1306 aa		32.61	■■■□□ 2.81
CDKN2A-208	ENST00000498124	CCDC125	Q86Z20	511 aa		32.61	■■■□□ 2.81
CDKN2A-208	ENST00000498124	CCDC9	Q9Y3X0	531 aa	Known RBP	32.61	■■■□□ 2.81
CDKN2A-208	ENST00000498124	CCDC61	Q9Y6R9	512 aa		32.61	■■■□□ 2.81
CDKN2A-208	ENST00000498124	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.6	■■■□□ 2.81
CDKN2A-208	ENST00000498124	TRPM1	Q7Z4N2	1603 aa		32.6	■■■□□ 2.81
CDKN2A-208	ENST00000498124	PLEKHG3	A1L390	1219 aa		32.6	■■■□□ 2.81
CDKN2A-208	ENST00000498124	BLM	P54132	1417 aa	Predicted RBP	32.6	■■■□□ 2.81
CDKN2A-208	ENST00000498124	SIN3A	Q96ST3	1273 aa		32.58	■■■□□ 2.81
CDKN2A-208	ENST00000498124	NBPF8	Q3BBV2	869 aa		32.57	■■■□□ 2.8
CDKN2A-208	ENST00000498124	NRK	Q7Z2Y5	1582 aa		32.56	■■■□□ 2.8
CDKN2A-208	ENST00000498124	KIAA0232	Q92628	1395 aa		32.56	■■■□□ 2.8
CDKN2A-208	ENST00000498124	PPIP5K1	Q6PFW1	1433 aa		32.54	■■■□□ 2.8
CDKN2A-208	ENST00000498124	PRDM11	Q9NQV5	511 aa		32.54	■■■□□ 2.8
CDKN2A-208	ENST00000498124	THSD7A	Q9UPZ6	1657 aa		32.53	■■■□□ 2.8
CDKN2A-208	ENST00000498124	SPATA31A5	Q5VU36	1347 aa		32.52	■■■□□ 2.8
CDKN2A-208	ENST00000498124	SPATA31A7	Q8IWB4	1347 aa		32.52	■■■□□ 2.8
CDKN2A-208	ENST00000498124	FAM98C	Q17RN3	349 aa	Known RBP	32.52	■■■□□ 2.8
CDKN2A-208	ENST00000498124	NUTM2G	Q5VZR2	741 aa		32.52	■■■□□ 2.8
CDKN2A-208	ENST00000498124	KRT27	Q7Z3Y8	459 aa		32.52	■■■□□ 2.8
CDKN2A-208	ENST00000498124	SRPK2	P78362	688 aa	Known RBP	32.5	■■■□□ 2.79
CDKN2A-208	ENST00000498124	CABP2	Q9NPB3	220 aa		32.5	■■■□□ 2.79
CDKN2A-208	ENST00000498124	CHRNA2	Q15822	529 aa		32.48	■■■□□ 2.79
CDKN2A-208	ENST00000498124	USP19	O94966	1318 aa		32.48	■■■□□ 2.79
CDKN2A-208	ENST00000498124	LMO7	Q8WWI1	1683 aa		32.46	■■■□□ 2.79
CDKN2A-208	ENST00000498124	DEFB132	Q7Z7B7	95 aa		32.45	■■■□□ 2.79
CDKN2A-208	ENST00000498124		A0A0G2JS52	829 aa		32.44	■■■□□ 2.78
CDKN2A-208	ENST00000498124	ZC3H6	P61129	1189 aa	Known RBP	32.44	■■■□□ 2.78
CDKN2A-208	ENST00000498124	MYT1	Q01538	1121 aa		32.44	■■■□□ 2.78
CDKN2A-208	ENST00000498124	NEUROD1	Q13562	356 aa		32.43	■■■□□ 2.78
CDKN2A-208	ENST00000498124	ABTB2	Q8N961	1025 aa		32.43	■■■□□ 2.78
CDKN2A-208	ENST00000498124	ZRANB1	Q9UGI0	708 aa		32.43	■■■□□ 2.78
CDKN2A-208	ENST00000498124	SPATA31A1	Q5TZJ5	1347 aa		32.42	■■■□□ 2.78
CDKN2A-208	ENST00000498124	CPD	O75976	1380 aa		32.42	■■■□□ 2.78
CDKN2A-208	ENST00000498124	CAMTA1	Q9Y6Y1	1673 aa		32.41	■■■□□ 2.78
CDKN2A-208	ENST00000498124	PCGF6	Q9BYE7	350 aa		32.41	■■■□□ 2.78
CDKN2A-208	ENST00000498124	ROCK2	O75116	1388 aa	Known RBP	32.41	■■■□□ 2.78
CDKN2A-208	ENST00000498124	USP6	P35125	1406 aa		32.41	■■■□□ 2.78
CDKN2A-208	ENST00000498124	BRD4	O60885	1362 aa	Predicted RBP	32.39	■■■□□ 2.78
CDKN2A-208	ENST00000498124	SSH2	Q76I76	1423 aa		32.38	■■■□□ 2.77
CDKN2A-208	ENST00000498124	CABP1	Q9NZU7	370 aa		32.38	■■■□□ 2.77
CDKN2A-208	ENST00000498124	STRN4	Q9NRL3	753 aa		32.37	■■■□□ 2.77
CDKN2A-208	ENST00000498124	PIK3C2A	O00443	1686 aa		32.36	■■■□□ 2.77
CDKN2A-208	ENST00000498124	SF3B2	Q13435	895 aa	Known RBP	32.35	■■■□□ 2.77
CDKN2A-208	ENST00000498124	SLIT3	O75094	1523 aa		32.35	■■■□□ 2.77
CDKN2A-208	ENST00000498124	RGPD1	P0DJD0	1748 aa		32.34	■■■□□ 2.77
CDKN2A-208	ENST00000498124	EVC2	Q86UK5	1308 aa		32.34	■■■□□ 2.77
CDKN2A-208	ENST00000498124	FAM182B	Q5T319	152 aa		32.34	■■■□□ 2.77
CDKN2A-208	ENST00000498124	TNS1	Q9HBL0	1735 aa	Known RBP	32.33	■■■□□ 2.77
CDKN2A-208	ENST00000498124	GC	P02774	474 aa		32.32	■■■□□ 2.76
CDKN2A-208	ENST00000498124	NLRP13	Q86W25	1043 aa		32.32	■■■□□ 2.76
CDKN2A-208	ENST00000498124	AKAP12	Q02952	1782 aa		32.32	■■■□□ 2.76
CDKN2A-208	ENST00000498124	LARP1	Q6PKG0	1096 aa	Known RBP	32.29	■■■□□ 2.76
CDKN2A-208	ENST00000498124	COL5A2	P05997	1499 aa	Predicted RBP	32.29	■■■□□ 2.76
CDKN2A-208	ENST00000498124	BARGIN	Q6ZT62	677 aa		32.26	■■■□□ 2.75
CDKN2A-208	ENST00000498124	USP35	Q9P2H5	1018 aa		32.25	■■■□□ 2.75
CDKN2A-208	ENST00000498124	DISP2	A7MBM2	1401 aa		32.25	■■■□□ 2.75
CDKN2A-208	ENST00000498124	SBNO2	Q9Y2G9	1366 aa		32.24	■■■□□ 2.75
CDKN2A-208	ENST00000498124	BAG6	P46379	1132 aa		32.24	■■■□□ 2.75
CDKN2A-208	ENST00000498124	EVA1C	P58658	441 aa		32.24	■■■□□ 2.75
CDKN2A-208	ENST00000498124	COL18A1	P39060	1754 aa		32.24	■■■□□ 2.75
CDKN2A-208	ENST00000498124	NLRP6	P59044	892 aa		32.23	■■■□□ 2.75
CDKN2A-208	ENST00000498124	CPSF1	Q10570	1443 aa	Known RBP	32.22	■■■□□ 2.75
CDKN2A-208	ENST00000498124	AATK	Q6ZMQ8	1374 aa		32.2	■■■□□ 2.75
CDKN2A-208	ENST00000498124	PARP4	Q9UKK3	1724 aa	Known RBP	32.2	■■■□□ 2.75
CDKN2A-208	ENST00000498124	TCP11L2	Q8N4U5	519 aa		32.2	■■■□□ 2.75
CDKN2A-208	ENST00000498124	TTC21B	Q7Z4L5	1316 aa		32.2	■■■□□ 2.74
CDKN2A-208	ENST00000498124	MON2	Q7Z3U7	1717 aa		32.2	■■■□□ 2.74
CDKN2A-208	ENST00000498124	EN1	Q05925	392 aa	Predicted RBP	32.18	■■■□□ 2.74
CDKN2A-208	ENST00000498124	CRB1	P82279	1406 aa		32.17	■■■□□ 2.74
CDKN2A-208	ENST00000498124	FAM196A	Q6ZSG2	479 aa		32.15	■■■□□ 2.74
CDKN2A-208	ENST00000498124	ZNF692	Q9BU19	519 aa	Predicted RBP	32.15	■■■□□ 2.74
CDKN2A-208	ENST00000498124	NFAT5	O94916	1531 aa		32.15	■■■□□ 2.74
CDKN2A-208	ENST00000498124	CARD11	Q9BXL7	1154 aa		32.14	■■■□□ 2.74
CDKN2A-208	ENST00000498124	THRAP3	Q9Y2W1	955 aa	Known RBP	32.14	■■■□□ 2.74
CDKN2A-208	ENST00000498124	TONSL	Q96HA7	1378 aa		32.14	■■■□□ 2.74
CDKN2A-208	ENST00000498124	CD163L1	Q9NR16	1453 aa		32.14	■■■□□ 2.74
CDKN2A-208	ENST00000498124	ZBTB7C	A1YPR0	619 aa		32.13	■■■□□ 2.73
CDKN2A-208	ENST00000498124	LRP5	O75197	1615 aa		32.13	■■■□□ 2.73
CDKN2A-208	ENST00000498124	TTC21A	Q8NDW8	1320 aa		32.12	■■■□□ 2.73
CDKN2A-208	ENST00000498124	TRIM37	O94972	964 aa		32.12	■■■□□ 2.73
CDKN2A-208	ENST00000498124	LRRC37A3	O60309	1634 aa		32.11	■■■□□ 2.73
CDKN2A-208	ENST00000498124	KTN1	Q86UP2	1357 aa	Known RBP	32.11	■■■□□ 2.73
CDKN2A-208	ENST00000498124	WNK3	Q9BYP7	1800 aa		32.11	■■■□□ 2.73
CDKN2A-208	ENST00000498124	USP54	Q70EL1	1684 aa		32.11	■■■□□ 2.73
CDKN2A-208	ENST00000498124	AXIN2	Q9Y2T1	843 aa		32.1	■■■□□ 2.73
CDKN2A-208	ENST00000498124	PEAK1	Q9H792	1746 aa		32.09	■■■□□ 2.73
CDKN2A-208	ENST00000498124	PSD	A5PKW4	1024 aa	Predicted RBP	32.09	■■■□□ 2.73
CDKN2A-208	ENST00000498124	PDE3B	Q13370	1112 aa		32.09	■■■□□ 2.73
CDKN2A-208	ENST00000498124	ARHGEF25	Q86VW2	580 aa		32.09	■■■□□ 2.73

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