RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PRR7Q8TB68 274 aa7.87□□□□□ -1.15
PSPC1-205ENST00000497722 NUDT12Q9BQG2 462 aa7.87□□□□□ -1.15
PSPC1-205ENST00000497722 HRCP23327 699 aa7.86□□□□□ -1.15
PSPC1-205ENST00000497722 PTPRNQ16849 979 aa7.86□□□□□ -1.15
PSPC1-205ENST00000497722 PRPF38BQ5VTL8 546 aaKnown RBP7.86□□□□□ -1.15
PSPC1-205ENST00000497722 CCDC24Q8N4L8 307 aa7.86□□□□□ -1.15
PSPC1-205ENST00000497722 EVA1BQ9NVM1 165 aa7.86□□□□□ -1.15
PSPC1-205ENST00000497722 LIMD1Q9UGP4 676 aa7.86□□□□□ -1.15
PSPC1-205ENST00000497722 CFAP99D6REC4 459 aa7.85□□□□□ -1.15
PSPC1-205ENST00000497722 WNT7BP56706 349 aa7.85□□□□□ -1.15
PSPC1-205ENST00000497722 CCNYL3P0C7X3 344 aa7.84□□□□□ -1.15
PSPC1-205ENST00000497722 ERBB4Q15303 1308 aa7.83□□□□□ -1.16
PSPC1-205ENST00000497722 LILRB3O75022 631 aa7.83□□□□□ -1.16
PSPC1-205ENST00000497722 VEGFBP49765 207 aa7.83□□□□□ -1.16
PSPC1-205ENST00000497722 KCNMA1Q12791 1236 aa7.83□□□□□ -1.16
PSPC1-205ENST00000497722 LYPD8Q6UX82 237 aa7.83□□□□□ -1.16
PSPC1-205ENST00000497722 KCTD17Q8N5Z5 321 aa7.83□□□□□ -1.16
PSPC1-205ENST00000497722 CABLES1Q8TDN4 633 aa7.83□□□□□ -1.16
PSPC1-205ENST00000497722 ZBTB3Q9H5J0 574 aa7.83□□□□□ -1.16
PSPC1-205ENST00000497722 KCNH2Q12809 1159 aa7.82□□□□□ -1.16
PSPC1-205ENST00000497722 QPCTQ16769 361 aa7.82□□□□□ -1.16
PSPC1-205ENST00000497722 RC3H1Q5TC82 1133 aaKnown RBP7.82□□□□□ -1.16
PSPC1-205ENST00000497722 SIAH2O43255 324 aa7.81□□□□□ -1.16
PSPC1-205ENST00000497722 BMP1P13497 986 aa7.81□□□□□ -1.16
PSPC1-205ENST00000497722 GPBP1L1Q9HC44 474 aaPredicted RBP7.81□□□□□ -1.16
PSPC1-205ENST00000497722 F12P00748 615 aaPredicted RBP7.8□□□□□ -1.16
PSPC1-205ENST00000497722 SH3BP2P78314 561 aa7.8□□□□□ -1.16
PSPC1-205ENST00000497722 UNC93B1Q9H1C4 597 aa7.8□□□□□ -1.16
PSPC1-205ENST00000497722 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
PSPC1-205ENST00000497722 PLEKHG3A1L390 1219 aa7.79□□□□□ -1.16
PSPC1-205ENST00000497722 ALDH1A1P00352 501 aa7.79□□□□□ -1.16
PSPC1-205ENST00000497722 TRIM46Q7Z4K8 759 aa7.79□□□□□ -1.16
PSPC1-205ENST00000497722 CAPN5O15484 640 aaPredicted RBP7.78□□□□□ -1.16
PSPC1-205ENST00000497722 PER1O15534 1290 aaPredicted RBP7.78□□□□□ -1.16
PSPC1-205ENST00000497722 CLK2P49760 499 aaKnown RBP7.78□□□□□ -1.16
PSPC1-205ENST00000497722 CSPP1Q1MSJ5 1256 aa7.78□□□□□ -1.16
PSPC1-205ENST00000497722 RTL5Q5HYW3 569 aaPredicted RBP7.78□□□□□ -1.16
PSPC1-205ENST00000497722 FBXO31Q5XUX0 539 aaPredicted RBP7.78□□□□□ -1.16
PSPC1-205ENST00000497722 FAM117AQ9C073 453 aa7.78□□□□□ -1.16
PSPC1-205ENST00000497722 RSPH6AQ9H0K4 717 aa7.78□□□□□ -1.16
PSPC1-205ENST00000497722 TMEM151AQ8N4L1 468 aa7.77□□□□□ -1.17
PSPC1-205ENST00000497722 VSIG8P0DPA2 414 aa7.76□□□□□ -1.17
PSPC1-205ENST00000497722 BAP1Q92560 729 aa7.76□□□□□ -1.17
PSPC1-205ENST00000497722 POLR3EQ9NVU0 708 aa7.76□□□□□ -1.17
PSPC1-205ENST00000497722 RNF225M0QZC1 329 aaPredicted RBP7.75□□□□□ -1.17
PSPC1-205ENST00000497722 GSK3AP49840 483 aa7.75□□□□□ -1.17
PSPC1-205ENST00000497722 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
PSPC1-205ENST00000497722 SH3D19Q5HYK7 790 aa7.75□□□□□ -1.17
PSPC1-205ENST00000497722 ZNF511Q8NB15 262 aa7.75□□□□□ -1.17
PSPC1-205ENST00000497722 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
PSPC1-205ENST00000497722 MAP10Q9P2G4 905 aa7.75□□□□□ -1.17
PSPC1-205ENST00000497722 DDRGK1Q96HY6 314 aa7.74□□□□□ -1.17
PSPC1-205ENST00000497722 WASF2Q9Y6W5 498 aa7.74□□□□□ -1.17
PSPC1-205ENST00000497722 GDF11O95390 407 aa7.73□□□□□ -1.17
PSPC1-205ENST00000497722 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
PSPC1-205ENST00000497722 MPNDQ8N594 471 aa7.73□□□□□ -1.17
PSPC1-205ENST00000497722 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
PSPC1-205ENST00000497722 NUTM2BA6NNL0 878 aaPredicted RBP7.72□□□□□ -1.17
PSPC1-205ENST00000497722 NUTM2EB1AL46 878 aaPredicted RBP7.72□□□□□ -1.17
PSPC1-205ENST00000497722 NUTM2DQ5VT03 806 aaPredicted RBP7.72□□□□□ -1.17
PSPC1-205ENST00000497722 PPP2R2DQ66LE6 453 aa7.72□□□□□ -1.17
PSPC1-205ENST00000497722 NUTM2AQ8IVF1 878 aaPredicted RBP7.72□□□□□ -1.17
PSPC1-205ENST00000497722 EHBP1Q8NDI1 1231 aa7.72□□□□□ -1.17
PSPC1-205ENST00000497722 CTHP32929 405 aa7.71□□□□□ -1.18
PSPC1-205ENST00000497722 RASSF7Q02833 373 aa7.71□□□□□ -1.18
PSPC1-205ENST00000497722 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
PSPC1-205ENST00000497722 VARSP26640 1264 aaKnown RBP7.7□□□□□ -1.18
PSPC1-205ENST00000497722 C4orf48Q5BLP8 95 aa7.7□□□□□ -1.18
PSPC1-205ENST00000497722 CTDSPL2Q05D32 466 aa7.69□□□□□ -1.18
PSPC1-205ENST00000497722 FOXJ1Q92949 421 aa7.69□□□□□ -1.18
PSPC1-205ENST00000497722 HELBQ8NG08 1087 aaPredicted RBP7.68□□□□□ -1.18
PSPC1-205ENST00000497722 SCARF1Q14162 830 aa7.67□□□□□ -1.18
PSPC1-205ENST00000497722 SH3RF1Q7Z6J0 888 aa7.67□□□□□ -1.18
PSPC1-205ENST00000497722 TSC1Q92574 1164 aa7.67□□□□□ -1.18
PSPC1-205ENST00000497722 CDK15Q96Q40 435 aa7.67□□□□□ -1.18
PSPC1-205ENST00000497722 GOPCQ9HD26 462 aa7.67□□□□□ -1.18
PSPC1-205ENST00000497722 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
PSPC1-205ENST00000497722 C1QTNF2Q9BXJ5 285 aa7.66□□□□□ -1.18
PSPC1-205ENST00000497722 IGHA1P01876 353 aa7.65□□□□□ -1.18
PSPC1-205ENST00000497722 BRPF1P55201 1214 aaPredicted RBP7.65□□□□□ -1.18
PSPC1-205ENST00000497722 MRPL14Q6P1L8 145 aaKnown RBP7.65□□□□□ -1.18
PSPC1-205ENST00000497722 SH3BP5LQ7L8J4 393 aa7.65□□□□□ -1.18
PSPC1-205ENST00000497722 LRRN4Q8WUT4 740 aa7.65□□□□□ -1.18
PSPC1-205ENST00000497722 KLF16Q9BXK1 252 aaPredicted RBP7.65□□□□□ -1.18
PSPC1-205ENST00000497722 ARMC2Q8NEN0 867 aa7.64□□□□□ -1.19
PSPC1-205ENST00000497722 GRM5P41594 1212 aa7.63□□□□□ -1.19
PSPC1-205ENST00000497722 BPHLQ86WA6 291 aaPredicted RBP7.63□□□□□ -1.19
PSPC1-205ENST00000497722 FAM174AQ8TBP5 190 aa7.63□□□□□ -1.19
PSPC1-205ENST00000497722 DNMT3AQ9Y6K1 912 aaPredicted RBP7.63□□□□□ -1.19
PSPC1-205ENST00000497722 ADH1CP00326 375 aa7.62□□□□□ -1.19
PSPC1-205ENST00000497722 NEUROD2Q15784 382 aa7.62□□□□□ -1.19
PSPC1-205ENST00000497722 GPAT2Q6NUI2 795 aa7.62□□□□□ -1.19
PSPC1-205ENST00000497722 GPKOWQ92917 476 aaPredicted RBP eCLIP7.62□□□□□ -1.19
PSPC1-205ENST00000497722 PURBQ96QR8 312 aaKnown RBP7.62□□□□□ -1.19
PSPC1-205ENST00000497722 NNTQ13423 1086 aa7.61□□□□□ -1.19
PSPC1-205ENST00000497722 XP32Q5T750 250 aa7.61□□□□□ -1.19
PSPC1-205ENST00000497722 NBPF14Q5TI25 921 aa7.61□□□□□ -1.19
PSPC1-205ENST00000497722 TRMT44Q8IYL2 757 aaKnown RBP7.61□□□□□ -1.19
PSPC1-205ENST00000497722 TIMP2P16035 220 aa7.6□□□□□ -1.19
PSPC1-205ENST00000497722 RFC5P40937 340 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms