RNA–Protein interactions for RNA: ENST00000497146.5

PTGER3-211, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-211ENST00000497146 B4GALNT3Q6L9W6 998 aa28.34■■■□□ 2.13
PTGER3-211ENST00000497146 COL3A1P02461 1466 aaPredicted RBP28.34■■■□□ 2.13
PTGER3-211ENST00000497146 IQSEC2Q5JU85 1478 aa28.34■■■□□ 2.13
PTGER3-211ENST00000497146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.33■■■□□ 2.13
PTGER3-211ENST00000497146 PRR36Q9H6K5 1346 aa28.3■■■□□ 2.12
PTGER3-211ENST00000497146 NCBP3Q53F19 620 aaKnown RBP28.3■■■□□ 2.12
PTGER3-211ENST00000497146 PNPLA6Q8IY17 1366 aa28.29■■■□□ 2.12
PTGER3-211ENST00000497146 E9PSI1 815 aa28.29■■■□□ 2.12
PTGER3-211ENST00000497146 U2AF1L5P0DN76 240 aaPredicted RBP28.29■■■□□ 2.12
PTGER3-211ENST00000497146 U2AF1Q01081 240 aaKnown RBP eCLIP28.29■■■□□ 2.12
PTGER3-211ENST00000497146 NCKAP5LQ9HCH0 1330 aa28.27■■■□□ 2.12
PTGER3-211ENST00000497146 ANKLE2Q86XL3 938 aa28.27■■■□□ 2.12
PTGER3-211ENST00000497146 WWC1Q8IX03 1113 aa28.27■■■□□ 2.12
PTGER3-211ENST00000497146 SPINK5Q9NQ38 1064 aaPredicted RBP28.27■■■□□ 2.12
PTGER3-211ENST00000497146 TCP11L2Q8N4U5 519 aa28.26■■■□□ 2.11
PTGER3-211ENST00000497146 NRKQ7Z2Y5 1582 aa28.26■■■□□ 2.11
PTGER3-211ENST00000497146 NKTRP30414 1462 aaKnown RBP28.25■■■□□ 2.11
PTGER3-211ENST00000497146 MAP2P11137 1827 aaKnown RBP28.25■■■□□ 2.11
PTGER3-211ENST00000497146 PLEKHG3A1L390 1219 aa28.24■■■□□ 2.11
PTGER3-211ENST00000497146 PHF23Q9BUL5 403 aaPredicted RBP28.24■■■□□ 2.11
PTGER3-211ENST00000497146 AATKQ6ZMQ8 1374 aa28.24■■■□□ 2.11
PTGER3-211ENST00000497146 DIAPH1O60610 1272 aaKnown RBP28.23■■■□□ 2.11
PTGER3-211ENST00000497146 COG3Q96JB2 828 aa28.23■■■□□ 2.11
PTGER3-211ENST00000497146 CCDC27Q2M243 656 aa28.22■■■□□ 2.11
PTGER3-211ENST00000497146 DMRT2Q9Y5R5 561 aa28.22■■■□□ 2.11
PTGER3-211ENST00000497146 PNNQ9H307 717 aaKnown RBP28.22■■■□□ 2.11
PTGER3-211ENST00000497146 CCDC136Q96JN2 1154 aa28.21■■■□□ 2.11
PTGER3-211ENST00000497146 U2SURPO15042 1029 aaKnown RBP28.2■■■□□ 2.11
PTGER3-211ENST00000497146 NME9Q86XW9 330 aa28.2■■■□□ 2.11
PTGER3-211ENST00000497146 CDK12Q9NYV4 1490 aaPredicted RBP28.2■■■□□ 2.11
PTGER3-211ENST00000497146 CHD2O14647 1828 aaKnown RBP28.19■■■□□ 2.1
PTGER3-211ENST00000497146 EXOC6Q8TAG9 804 aa28.19■■■□□ 2.1
PTGER3-211ENST00000497146 POLKQ9UBT6 870 aa28.19■■■□□ 2.1
PTGER3-211ENST00000497146 USP6P35125 1406 aa28.19■■■□□ 2.1
PTGER3-211ENST00000497146 RRP7AQ9Y3A4 280 aaKnown RBP28.19■■■□□ 2.1
PTGER3-211ENST00000497146 ACEP12821 1306 aa28.18■■■□□ 2.1
PTGER3-211ENST00000497146 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
PTGER3-211ENST00000497146 PLIN1O60240 522 aa28.18■■■□□ 2.1
PTGER3-211ENST00000497146 NEUROD2Q15784 382 aa28.18■■■□□ 2.1
PTGER3-211ENST00000497146 MAPK8IP3Q9UPT6 1336 aa28.17■■■□□ 2.1
PTGER3-211ENST00000497146 WDR63Q8IWG1 891 aa28.17■■■□□ 2.1
PTGER3-211ENST00000497146 PLEKHF1Q96S99 279 aa28.17■■■□□ 2.1
PTGER3-211ENST00000497146 KCNA6P17658 529 aa28.16■■■□□ 2.1
PTGER3-211ENST00000497146 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.16■■■□□ 2.1
PTGER3-211ENST00000497146 FBLN1P23142 703 aa28.14■■■□□ 2.1
PTGER3-211ENST00000497146 TTC21BQ7Z4L5 1316 aa28.13■■■□□ 2.09
PTGER3-211ENST00000497146 FMN2Q9NZ56 1722 aa28.13■■■□□ 2.09
PTGER3-211ENST00000497146 PPM1GO15355 546 aaPredicted RBP28.13■■■□□ 2.09
PTGER3-211ENST00000497146 ZRANB1Q9UGI0 708 aa28.13■■■□□ 2.09
PTGER3-211ENST00000497146 NUTM2FA1L443 756 aa28.12■■■□□ 2.09
PTGER3-211ENST00000497146 NALCNQ8IZF0 1738 aa28.11■■■□□ 2.09
PTGER3-211ENST00000497146 OVOS2A0A0J9YW53 1432 aa28.11■■■□□ 2.09
PTGER3-211ENST00000497146 OVOS2Q6IE36 1432 aa28.11■■■□□ 2.09
PTGER3-211ENST00000497146 RGPD8O14715 1765 aaPredicted RBP28.11■■■□□ 2.09
PTGER3-211ENST00000497146 FCHSD2O94868 740 aa28.1■■■□□ 2.09
PTGER3-211ENST00000497146 TTC21AQ8NDW8 1320 aa28.1■■■□□ 2.09
PTGER3-211ENST00000497146 NEFMP07197 916 aa28.09■■■□□ 2.09
PTGER3-211ENST00000497146 LRRC7Q96NW7 1537 aa28.09■■■□□ 2.09
PTGER3-211ENST00000497146 NPHP4O75161 1426 aaPredicted RBP28.08■■■□□ 2.09
PTGER3-211ENST00000497146 SSH2Q76I76 1423 aa28.08■■■□□ 2.09
PTGER3-211ENST00000497146 EMILIN1Q9Y6C2 1016 aa28.07■■■□□ 2.08
PTGER3-211ENST00000497146 TMPOP42166 694 aaKnown RBP28.06■■■□□ 2.08
PTGER3-211ENST00000497146 CRBNQ96SW2 442 aa28.06■■■□□ 2.08
PTGER3-211ENST00000497146 MYH16Q9H6N6 1097 aa28.06■■■□□ 2.08
PTGER3-211ENST00000497146 C20orf194Q5TEA3 1177 aa28.05■■■□□ 2.08
PTGER3-211ENST00000497146 NGDNQ8NEJ9 315 aaKnown RBP28.05■■■□□ 2.08
PTGER3-211ENST00000497146 USP31Q70CQ4 1352 aa28.02■■■□□ 2.08
PTGER3-211ENST00000497146 IL13P35225 146 aa28.01■■■□□ 2.07
PTGER3-211ENST00000497146 PMFBP1Q8TBY8 1022 aa28.01■■■□□ 2.07
PTGER3-211ENST00000497146 RSPH6AQ9H0K4 717 aa28.01■■■□□ 2.07
PTGER3-211ENST00000497146 BCAR3O75815 825 aa28■■■□□ 2.07
PTGER3-211ENST00000497146 TRIM35Q9UPQ4 493 aa28■■■□□ 2.07
PTGER3-211ENST00000497146 RRS1Q15050 365 aaKnown RBP27.99■■■□□ 2.07
PTGER3-211ENST00000497146 RBM19Q9Y4C8 960 aaKnown RBP27.99■■■□□ 2.07
PTGER3-211ENST00000497146 ADGRL3Q9HAR2 1447 aa27.99■■■□□ 2.07
PTGER3-211ENST00000497146 PRKAR2BP31323 418 aa27.98■■■□□ 2.07
PTGER3-211ENST00000497146 NWD1Q149M9 1564 aa27.98■■■□□ 2.07
PTGER3-211ENST00000497146 IL16Q14005 1332 aa27.97■■■□□ 2.07
PTGER3-211ENST00000497146 RIPK4P57078 832 aa27.96■■■□□ 2.07
PTGER3-211ENST00000497146 PIK3C2AO00443 1686 aa27.96■■■□□ 2.07
PTGER3-211ENST00000497146 CT47B1P0C2W7 299 aaPredicted RBP27.95■■■□□ 2.06
PTGER3-211ENST00000497146 USP54Q70EL1 1684 aa27.94■■■□□ 2.06
PTGER3-211ENST00000497146 RARSP54136 660 aaKnown RBP27.92■■■□□ 2.06
PTGER3-211ENST00000497146 HMOX1P09601 288 aa27.91■■■□□ 2.06
PTGER3-211ENST00000497146 PEAK1Q9H792 1746 aa27.89■■■□□ 2.06
PTGER3-211ENST00000497146 FANCIQ9NVI1 1328 aa27.89■■■□□ 2.06
PTGER3-211ENST00000497146 CALD1Q05682 793 aaKnown RBP27.89■■■□□ 2.06
PTGER3-211ENST00000497146 PDE3AQ14432 1141 aa27.89■■■□□ 2.06
PTGER3-211ENST00000497146 CANXP27824 592 aaKnown RBP27.88■■■□□ 2.05
PTGER3-211ENST00000497146 NFE2L2Q16236 605 aa27.88■■■□□ 2.05
PTGER3-211ENST00000497146 PHACTR3Q96KR7 559 aa27.88■■■□□ 2.05
PTGER3-211ENST00000497146 PHF8Q9UPP1 1060 aa27.87■■■□□ 2.05
PTGER3-211ENST00000497146 SBNO1A3KN83 1393 aa27.87■■■□□ 2.05
PTGER3-211ENST00000497146 FLT4P35916 1363 aa27.87■■■□□ 2.05
PTGER3-211ENST00000497146 LMOD3Q0VAK6 560 aa27.86■■■□□ 2.05
PTGER3-211ENST00000497146 EIF4A2Q14240 407 aaKnown RBP27.85■■■□□ 2.05
PTGER3-211ENST00000497146 TSR2Q969E8 191 aaKnown RBP27.85■■■□□ 2.05
PTGER3-211ENST00000497146 KIF24Q5T7B8 1368 aa27.85■■■□□ 2.05
PTGER3-211ENST00000497146 RGPD1P0DJD0 1748 aa27.85■■■□□ 2.05
PTGER3-211ENST00000497146 C14orf37Q86TY3 774 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms