RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 TNS3Q68CZ2 1445 aa21.88■■□□□ 1.09
PMF1-205ENST00000497069 ARHGEF10O15013 1369 aa21.86■■□□□ 1.09
PMF1-205ENST00000497069 MYOM1P52179 1685 aa21.85■■□□□ 1.09
PMF1-205ENST00000497069 AKAP12Q02952 1782 aa21.84■■□□□ 1.09
PMF1-205ENST00000497069 TTC21BQ7Z4L5 1316 aa21.83■■□□□ 1.09
PMF1-205ENST00000497069 TTC21AQ8NDW8 1320 aa21.83■■□□□ 1.09
PMF1-205ENST00000497069 EDC4Q6P2E9 1401 aaKnown RBP21.83■■□□□ 1.09
PMF1-205ENST00000497069 ABTB2Q8N961 1025 aa21.83■■□□□ 1.09
PMF1-205ENST00000497069 PNPLA6Q8IY17 1366 aa21.83■■□□□ 1.08
PMF1-205ENST00000497069 TRPM3Q9HCF6 1732 aaPredicted RBP21.83■■□□□ 1.08
PMF1-205ENST00000497069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.82■■□□□ 1.08
PMF1-205ENST00000497069 SSH2Q76I76 1423 aa21.81■■□□□ 1.08
PMF1-205ENST00000497069 MON2Q7Z3U7 1717 aa21.81■■□□□ 1.08
PMF1-205ENST00000497069 PANK3Q9H999 370 aa21.81■■□□□ 1.08
PMF1-205ENST00000497069 SPATA31A6Q5VVP1 1343 aa21.8■■□□□ 1.08
PMF1-205ENST00000497069 SHPRHQ149N8 1683 aa21.79■■□□□ 1.08
PMF1-205ENST00000497069 PLEKHG5O94827 1062 aa21.79■■□□□ 1.08
PMF1-205ENST00000497069 HAP1P54257 671 aaPredicted RBP21.79■■□□□ 1.08
PMF1-205ENST00000497069 NUTM2GQ5VZR2 741 aa21.79■■□□□ 1.08
PMF1-205ENST00000497069 NRKQ7Z2Y5 1582 aa21.78■■□□□ 1.08
PMF1-205ENST00000497069 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
PMF1-205ENST00000497069 NLRP6P59044 892 aa21.78■■□□□ 1.08
PMF1-205ENST00000497069 NLRP13Q86W25 1043 aa21.78■■□□□ 1.08
PMF1-205ENST00000497069 NSD3Q9BZ95 1437 aa21.78■■□□□ 1.08
PMF1-205ENST00000497069 ALS2Q96Q42 1657 aa21.77■■□□□ 1.08
PMF1-205ENST00000497069 CARD14Q9BXL6 1004 aa21.77■■□□□ 1.08
PMF1-205ENST00000497069 NUTM2BA6NNL0 878 aaPredicted RBP21.76■■□□□ 1.07
PMF1-205ENST00000497069 NUTM2EB1AL46 878 aaPredicted RBP21.76■■□□□ 1.07
PMF1-205ENST00000497069 NUTM2AQ8IVF1 878 aaPredicted RBP21.76■■□□□ 1.07
PMF1-205ENST00000497069 NME9Q86XW9 330 aa21.75■■□□□ 1.07
PMF1-205ENST00000497069 KNSTRNQ9Y448 316 aa21.75■■□□□ 1.07
PMF1-205ENST00000497069 COL22A1Q8NFW1 1626 aaPredicted RBP21.75■■□□□ 1.07
PMF1-205ENST00000497069 CABLES1Q8TDN4 633 aa21.74■■□□□ 1.07
PMF1-205ENST00000497069 CGNL1Q0VF96 1302 aa21.74■■□□□ 1.07
PMF1-205ENST00000497069 PIK3C2AO00443 1686 aa21.72■■□□□ 1.07
PMF1-205ENST00000497069 MED1Q15648 1581 aaPredicted RBP21.71■■□□□ 1.07
PMF1-205ENST00000497069 MEX3CQ5U5Q3 659 aaKnown RBP21.71■■□□□ 1.07
PMF1-205ENST00000497069 COG3Q96JB2 828 aa21.71■■□□□ 1.07
PMF1-205ENST00000497069 USP31Q70CQ4 1352 aa21.71■■□□□ 1.07
PMF1-205ENST00000497069 FYB1O15117 783 aa21.69■■□□□ 1.06
PMF1-205ENST00000497069 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
PMF1-205ENST00000497069 GGNBP2Q9H3C7 697 aa21.69■■□□□ 1.06
PMF1-205ENST00000497069 ZRANB1Q9UGI0 708 aa21.69■■□□□ 1.06
PMF1-205ENST00000497069 USP19O94966 1318 aa21.69■■□□□ 1.06
PMF1-205ENST00000497069 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
PMF1-205ENST00000497069 KCNH5Q8NCM2 988 aa21.68■■□□□ 1.06
PMF1-205ENST00000497069 GCP02774 474 aa21.67■■□□□ 1.06
PMF1-205ENST00000497069 OVOS2A0A0J9YW53 1432 aa21.66■■□□□ 1.06
PMF1-205ENST00000497069 OVOS2Q6IE36 1432 aa21.66■■□□□ 1.06
PMF1-205ENST00000497069 LRP6O75581 1613 aa21.66■■□□□ 1.06
PMF1-205ENST00000497069 SOX12O15370 315 aa21.65■■□□□ 1.06
PMF1-205ENST00000497069 PER1O15534 1290 aaPredicted RBP21.65■■□□□ 1.06
PMF1-205ENST00000497069 KIF20BQ96Q89 1820 aa21.64■■□□□ 1.06
PMF1-205ENST00000497069 NSD2O96028 1365 aa21.64■■□□□ 1.06
PMF1-205ENST00000497069 ZC3H6P61129 1189 aaKnown RBP21.64■■□□□ 1.05
PMF1-205ENST00000497069 PHRF1Q9P1Y6 1649 aaKnown RBP21.64■■□□□ 1.05
PMF1-205ENST00000497069 SLIT3O75094 1523 aa21.64■■□□□ 1.05
PMF1-205ENST00000497069 ABCA3Q99758 1704 aa21.63■■□□□ 1.05
PMF1-205ENST00000497069 C8orf37Q96NL8 207 aa21.62■■□□□ 1.05
PMF1-205ENST00000497069 USP54Q70EL1 1684 aa21.62■■□□□ 1.05
PMF1-205ENST00000497069 CRYBG1Q9Y4K1 1723 aa21.61■■□□□ 1.05
PMF1-205ENST00000497069 ZBTB7CA1YPR0 619 aa21.61■■□□□ 1.05
PMF1-205ENST00000497069 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
PMF1-205ENST00000497069 NGLY1Q96IV0 654 aa21.61■■□□□ 1.05
PMF1-205ENST00000497069 PRDM11Q9NQV5 511 aa21.61■■□□□ 1.05
PMF1-205ENST00000497069 MORC1Q86VD1 984 aa21.6■■□□□ 1.05
PMF1-205ENST00000497069 KIAA0232Q92628 1395 aa21.6■■□□□ 1.05
PMF1-205ENST00000497069 CNGB1Q14028 1251 aaPredicted RBP21.59■■□□□ 1.05
PMF1-205ENST00000497069 CC2D1BQ5T0F9 858 aaKnown RBP21.59■■□□□ 1.05
PMF1-205ENST00000497069 MARF1Q9Y4F3 1742 aaKnown RBP21.58■■□□□ 1.05
PMF1-205ENST00000497069 CPDO75976 1380 aa21.58■■□□□ 1.04
PMF1-205ENST00000497069 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
PMF1-205ENST00000497069 NPC1L1Q9UHC9 1359 aa21.57■■□□□ 1.04
PMF1-205ENST00000497069 FAM83GA6ND36 823 aa21.56■■□□□ 1.04
PMF1-205ENST00000497069 NFAT5O94916 1531 aa21.55■■□□□ 1.04
PMF1-205ENST00000497069 TNNT2P45379 298 aaPredicted RBP21.55■■□□□ 1.04
PMF1-205ENST00000497069 CHRNA2Q15822 529 aa21.55■■□□□ 1.04
PMF1-205ENST00000497069 ARHGEF25Q86VW2 580 aa21.54■■□□□ 1.04
PMF1-205ENST00000497069 ANKRD26Q9UPS8 1709 aa21.54■■□□□ 1.04
PMF1-205ENST00000497069 AFF2P51816 1311 aa21.53■■□□□ 1.04
PMF1-205ENST00000497069 COL14A1Q05707 1796 aaKnown RBP21.52■■□□□ 1.04
PMF1-205ENST00000497069 BTG4Q9NY30 223 aa21.52■■□□□ 1.04
PMF1-205ENST00000497069 AATKQ6ZMQ8 1374 aa21.51■■□□□ 1.03
PMF1-205ENST00000497069 FBLN1P23142 703 aa21.51■■□□□ 1.03
PMF1-205ENST00000497069 AMPHP49418 695 aa21.51■■□□□ 1.03
PMF1-205ENST00000497069 RRS1Q15050 365 aaKnown RBP21.51■■□□□ 1.03
PMF1-205ENST00000497069 FNBP4Q8N3X1 1017 aaPredicted RBP21.51■■□□□ 1.03
PMF1-205ENST00000497069 USP21Q9UK80 565 aa21.51■■□□□ 1.03
PMF1-205ENST00000497069 ZNF772Q68DY9 489 aaPredicted RBP21.5■■□□□ 1.03
PMF1-205ENST00000497069 MAP3K19Q56UN5 1328 aa21.5■■□□□ 1.03
PMF1-205ENST00000497069 SLIT2O94813 1529 aa21.49■■□□□ 1.03
PMF1-205ENST00000497069 PPM1GO15355 546 aaPredicted RBP21.48■■□□□ 1.03
PMF1-205ENST00000497069 EVA1CP58658 441 aa21.48■■□□□ 1.03
PMF1-205ENST00000497069 UNC5CLQ8IV45 518 aa21.47■■□□□ 1.03
PMF1-205ENST00000497069 IP6K1Q92551 441 aa21.46■■□□□ 1.03
PMF1-205ENST00000497069 STRN4Q9NRL3 753 aa21.46■■□□□ 1.03
PMF1-205ENST00000497069 EMILIN1Q9Y6C2 1016 aa21.46■■□□□ 1.03
PMF1-205ENST00000497069 PLCH1Q4KWH8 1693 aa21.46■■□□□ 1.03
PMF1-205ENST00000497069 RTL1A6NKG5 1358 aa21.46■■□□□ 1.03
PMF1-205ENST00000497069 KIF24Q5T7B8 1368 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms