RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 FAM187AA6NFU0 413 aa12.39□□□□□ -0.43
MDM2-220ENST00000496959 DGAT1O75907 488 aa12.39□□□□□ -0.43
MDM2-220ENST00000496959 TRAF7Q6Q0C0 670 aa12.39□□□□□ -0.43
MDM2-220ENST00000496959 MAP10Q9P2G4 905 aa12.39□□□□□ -0.43
MDM2-220ENST00000496959 TTC24A2A3L6 582 aaPredicted RBP12.38□□□□□ -0.43
MDM2-220ENST00000496959 BAP1Q92560 729 aa12.38□□□□□ -0.43
MDM2-220ENST00000496959 MRGPRX2Q96LB1 330 aa12.38□□□□□ -0.43
MDM2-220ENST00000496959 TOR4AQ9NXH8 423 aa12.37□□□□□ -0.43
MDM2-220ENST00000496959 SH3BP2P78314 561 aa12.36□□□□□ -0.43
MDM2-220ENST00000496959 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
MDM2-220ENST00000496959 LINC01559Q495D7 138 aa12.36□□□□□ -0.43
MDM2-220ENST00000496959 SNIP1Q8TAD8 396 aaKnown RBP12.36□□□□□ -0.43
MDM2-220ENST00000496959 ZNF511Q8NB15 262 aa12.35□□□□□ -0.43
MDM2-220ENST00000496959 EHBP1Q8NDI1 1231 aa12.35□□□□□ -0.43
MDM2-220ENST00000496959 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
MDM2-220ENST00000496959 AP1G2O75843 785 aa12.33□□□□□ -0.44
MDM2-220ENST00000496959 ARMC2Q8NEN0 867 aa12.33□□□□□ -0.44
MDM2-220ENST00000496959 RFC5P40937 340 aa12.31□□□□□ -0.44
MDM2-220ENST00000496959 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
MDM2-220ENST00000496959 LRRN4Q8WUT4 740 aa12.29□□□□□ -0.44
MDM2-220ENST00000496959 MYT1Q01538 1121 aa12.28□□□□□ -0.44
MDM2-220ENST00000496959 LCE2BO14633 110 aa12.27□□□□□ -0.45
MDM2-220ENST00000496959 SIAH2O43255 324 aa12.27□□□□□ -0.45
MDM2-220ENST00000496959 AGERQ15109 404 aa12.27□□□□□ -0.45
MDM2-220ENST00000496959 TMEM259Q4ZIN3 620 aa12.27□□□□□ -0.45
MDM2-220ENST00000496959 NBPF14Q5TI25 921 aa12.27□□□□□ -0.45
MDM2-220ENST00000496959 J3QL48 77 aa12.26□□□□□ -0.45
MDM2-220ENST00000496959 ALDH1A1P00352 501 aa12.26□□□□□ -0.45
MDM2-220ENST00000496959 SMPD1P17405 629 aa12.26□□□□□ -0.45
MDM2-220ENST00000496959 AVPP01185 164 aa12.25□□□□□ -0.45
MDM2-220ENST00000496959 USP17L8P0C7I0 530 aa12.25□□□□□ -0.45
MDM2-220ENST00000496959 BPHLQ86WA6 291 aaPredicted RBP12.25□□□□□ -0.45
MDM2-220ENST00000496959 FAM174AQ8TBP5 190 aa12.24□□□□□ -0.45
MDM2-220ENST00000496959 GPKOWQ92917 476 aaPredicted RBP eCLIP12.24□□□□□ -0.45
MDM2-220ENST00000496959 FOXJ1Q92949 421 aa12.24□□□□□ -0.45
MDM2-220ENST00000496959 NR6A1Q15406 480 aa12.23□□□□□ -0.45
MDM2-220ENST00000496959 WASF2Q9Y6W5 498 aa12.22□□□□□ -0.45
MDM2-220ENST00000496959 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
MDM2-220ENST00000496959 MPNDQ8N594 471 aa12.21□□□□□ -0.45
MDM2-220ENST00000496959 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
MDM2-220ENST00000496959 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
MDM2-220ENST00000496959 AAASQ9NRG9 546 aa12.2□□□□□ -0.46
MDM2-220ENST00000496959 FKBPLQ9UIM3 349 aa12.2□□□□□ -0.46
MDM2-220ENST00000496959 AXIN1O15169 862 aa12.19□□□□□ -0.46
MDM2-220ENST00000496959 TLL2Q9Y6L7 1015 aa12.19□□□□□ -0.46
MDM2-220ENST00000496959 ZC3H4Q9UPT8 1303 aaKnown RBP12.18□□□□□ -0.46
MDM2-220ENST00000496959 ST8SIA5O15466 376 aa12.18□□□□□ -0.46
MDM2-220ENST00000496959 SMCPP49901 116 aaPredicted RBP12.18□□□□□ -0.46
MDM2-220ENST00000496959 PDXDC2PQ6P474 469 aa12.18□□□□□ -0.46
MDM2-220ENST00000496959 HPS1Q92902 700 aa12.18□□□□□ -0.46
MDM2-220ENST00000496959 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
MDM2-220ENST00000496959 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
MDM2-220ENST00000496959 SH3RF1Q7Z6J0 888 aa12.17□□□□□ -0.46
MDM2-220ENST00000496959 HMX1Q9NP08 348 aaPredicted RBP12.17□□□□□ -0.46
MDM2-220ENST00000496959 MAGEB6P1A0A0J9YX57 407 aa12.16□□□□□ -0.46
MDM2-220ENST00000496959 ARID5BQ14865 1188 aa12.15□□□□□ -0.46
MDM2-220ENST00000496959 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
MDM2-220ENST00000496959 EPS8L1Q8TE68 723 aa12.14□□□□□ -0.47
MDM2-220ENST00000496959 CDK15Q96Q40 435 aa12.14□□□□□ -0.47
MDM2-220ENST00000496959 ARHGAP9Q9BRR9 750 aa12.14□□□□□ -0.47
MDM2-220ENST00000496959 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
MDM2-220ENST00000496959 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
MDM2-220ENST00000496959 ADH1CP00326 375 aa12.12□□□□□ -0.47
MDM2-220ENST00000496959 PTK2Q05397 1052 aa12.12□□□□□ -0.47
MDM2-220ENST00000496959 C1QTNF2Q9BXJ5 285 aa12.12□□□□□ -0.47
MDM2-220ENST00000496959 ZBTB33Q86T24 672 aa12.11□□□□□ -0.47
MDM2-220ENST00000496959 GPSM3Q9Y4H4 160 aa12.11□□□□□ -0.47
MDM2-220ENST00000496959 NNTQ13423 1086 aa12.1□□□□□ -0.47
MDM2-220ENST00000496959 TRMT44Q8IYL2 757 aaKnown RBP12.1□□□□□ -0.47
MDM2-220ENST00000496959 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
MDM2-220ENST00000496959 TRIM34Q9BYJ4 488 aa12.09□□□□□ -0.47
MDM2-220ENST00000496959 NR5A1Q13285 461 aa12.08□□□□□ -0.48
MDM2-220ENST00000496959 VASH1Q7L8A9 365 aaPredicted RBP12.08□□□□□ -0.48
MDM2-220ENST00000496959 DACH1Q9UI36 760 aa12.08□□□□□ -0.48
MDM2-220ENST00000496959 MAP4K5Q9Y4K4 846 aa12.08□□□□□ -0.48
MDM2-220ENST00000496959 APBB1O00213 710 aa12.07□□□□□ -0.48
MDM2-220ENST00000496959 CAPN5O15484 640 aaPredicted RBP12.07□□□□□ -0.48
MDM2-220ENST00000496959 GJD4Q96KN9 370 aaPredicted RBP12.07□□□□□ -0.48
MDM2-220ENST00000496959 SOCS7O14512 581 aa12.06□□□□□ -0.48
MDM2-220ENST00000496959 CDV3Q9UKY7 258 aaKnown RBP12.06□□□□□ -0.48
MDM2-220ENST00000496959 GRM5P41594 1212 aa12.05□□□□□ -0.48
MDM2-220ENST00000496959 SLC10A4Q96EP9 437 aa12.05□□□□□ -0.48
MDM2-220ENST00000496959 ATP13A2Q9NQ11 1180 aa12.04□□□□□ -0.48
MDM2-220ENST00000496959 FSHRP23945 695 aa12.03□□□□□ -0.48
MDM2-220ENST00000496959 WDR4P57081 412 aaKnown RBP12.03□□□□□ -0.48
MDM2-220ENST00000496959 ADAM32Q8TC27 787 aa12.03□□□□□ -0.48
MDM2-220ENST00000496959 SNRKQ9NRH2 765 aa12.03□□□□□ -0.48
MDM2-220ENST00000496959 MTMR14Q8NCE2 650 aa12.02□□□□□ -0.49
MDM2-220ENST00000496959 OCSTAMPQ9BR26 566 aa12.02□□□□□ -0.49
MDM2-220ENST00000496959 GMPR2Q9P2T1 348 aaKnown RBP12.02□□□□□ -0.49
MDM2-220ENST00000496959 POTECB2RU33 542 aa12.01□□□□□ -0.49
MDM2-220ENST00000496959 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
MDM2-220ENST00000496959 NR3C2P08235 984 aa12□□□□□ -0.49
MDM2-220ENST00000496959 TIMP2P16035 220 aa12□□□□□ -0.49
MDM2-220ENST00000496959 SENP2Q9HC62 589 aa12□□□□□ -0.49
MDM2-220ENST00000496959 DZIP3Q86Y13 1208 aaKnown RBP11.99□□□□□ -0.49
MDM2-220ENST00000496959 KCTD15Q96SI1 283 aaPredicted RBP11.99□□□□□ -0.49
MDM2-220ENST00000496959 PRM3Q9NNZ6 103 aa11.99□□□□□ -0.49
MDM2-220ENST00000496959 ZBBXA8MT70 800 aa11.98□□□□□ -0.49
MDM2-220ENST00000496959 C11orf95C9JLR9 678 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms