RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 PRR20CP86479 221 aa11.4□□□□□ -0.58
NCL-210ENST00000494618 PRR20DP86480 221 aa11.4□□□□□ -0.58
NCL-210ENST00000494618 PRR20BP86481 221 aa11.4□□□□□ -0.58
NCL-210ENST00000494618 PRR20AP86496 221 aa11.4□□□□□ -0.58
NCL-210ENST00000494618 LINC01559Q495D7 138 aa11.4□□□□□ -0.58
NCL-210ENST00000494618 ZNF511Q8NB15 262 aa11.4□□□□□ -0.58
NCL-210ENST00000494618 SH3BP2P78314 561 aa11.39□□□□□ -0.59
NCL-210ENST00000494618 SKOR1P84550 965 aa11.39□□□□□ -0.59
NCL-210ENST00000494618 NR6A1Q15406 480 aa11.39□□□□□ -0.59
NCL-210ENST00000494618 RC3H1Q5TC82 1133 aaKnown RBP11.39□□□□□ -0.59
NCL-210ENST00000494618 NBPF14Q5TI25 921 aa11.39□□□□□ -0.59
NCL-210ENST00000494618 TNFRSF10AO00220 468 aa11.38□□□□□ -0.59
NCL-210ENST00000494618 GPKOWQ92917 476 aaPredicted RBP eCLIP11.38□□□□□ -0.59
NCL-210ENST00000494618 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
NCL-210ENST00000494618 APBB1O00213 710 aa11.37□□□□□ -0.59
NCL-210ENST00000494618 NRG2O14511 850 aaPredicted RBP11.37□□□□□ -0.59
NCL-210ENST00000494618 TRIM67Q6ZTA4 783 aa11.37□□□□□ -0.59
NCL-210ENST00000494618 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
NCL-210ENST00000494618 AGERQ15109 404 aa11.36□□□□□ -0.59
NCL-210ENST00000494618 CYP4X1Q8N118 509 aa11.36□□□□□ -0.59
NCL-210ENST00000494618 HMX1Q9NP08 348 aaPredicted RBP11.36□□□□□ -0.59
NCL-210ENST00000494618 FKBPLQ9UIM3 349 aa11.36□□□□□ -0.59
NCL-210ENST00000494618 MRGPRX2Q96LB1 330 aa11.35□□□□□ -0.59
NCL-210ENST00000494618 ZC3H4Q9UPT8 1303 aaKnown RBP11.35□□□□□ -0.59
NCL-210ENST00000494618 VARSP26640 1264 aaKnown RBP11.34□□□□□ -0.59
NCL-210ENST00000494618 BPHLQ86WA6 291 aaPredicted RBP11.34□□□□□ -0.59
NCL-210ENST00000494618 TTC24A2A3L6 582 aaPredicted RBP11.33□□□□□ -0.6
NCL-210ENST00000494618 SOCS7O14512 581 aa11.33□□□□□ -0.6
NCL-210ENST00000494618 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
NCL-210ENST00000494618 PDXDC2PQ6P474 469 aa11.32□□□□□ -0.6
NCL-210ENST00000494618 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
NCL-210ENST00000494618 FOXJ1Q92949 421 aa11.31□□□□□ -0.6
NCL-210ENST00000494618 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
NCL-210ENST00000494618 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
NCL-210ENST00000494618 FAM174AQ8TBP5 190 aa11.3□□□□□ -0.6
NCL-210ENST00000494618 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
NCL-210ENST00000494618 TOR4AQ9NXH8 423 aa11.3□□□□□ -0.6
NCL-210ENST00000494618 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
NCL-210ENST00000494618 PTK2Q05397 1052 aa11.28□□□□□ -0.6
NCL-210ENST00000494618 PKDCCQ504Y2 493 aa11.28□□□□□ -0.6
NCL-210ENST00000494618 MTMR14Q8NCE2 650 aa11.28□□□□□ -0.6
NCL-210ENST00000494618 GPSM3Q9Y4H4 160 aa11.28□□□□□ -0.6
NCL-210ENST00000494618 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
NCL-210ENST00000494618 FAM187AA6NFU0 413 aa11.27□□□□□ -0.61
NCL-210ENST00000494618 Q6ZNB5 142 aa11.27□□□□□ -0.61
NCL-210ENST00000494618 SH3BP5LQ7L8J4 393 aa11.27□□□□□ -0.61
NCL-210ENST00000494618 ARHGAP9Q9BRR9 750 aa11.27□□□□□ -0.61
NCL-210ENST00000494618 NDUFB9Q9Y6M9 179 aa11.27□□□□□ -0.61
NCL-210ENST00000494618 SIAH2O43255 324 aa11.26□□□□□ -0.61
NCL-210ENST00000494618 DGAT1O75907 488 aa11.26□□□□□ -0.61
NCL-210ENST00000494618 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
NCL-210ENST00000494618 ZBTB33Q86T24 672 aa11.26□□□□□ -0.61
NCL-210ENST00000494618 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
NCL-210ENST00000494618 MPNDQ8N594 471 aa11.25□□□□□ -0.61
NCL-210ENST00000494618 CARD14Q9BXL6 1004 aa11.25□□□□□ -0.61
NCL-210ENST00000494618 FLIIQ13045 1269 aa11.23□□□□□ -0.61
NCL-210ENST00000494618 C4orf48Q5BLP8 95 aa11.23□□□□□ -0.61
NCL-210ENST00000494618 WASF2Q9Y6W5 498 aa11.23□□□□□ -0.61
NCL-210ENST00000494618 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
NCL-210ENST00000494618 J3QL48 77 aa11.21□□□□□ -0.61
NCL-210ENST00000494618 MCM6Q14566 821 aa11.21□□□□□ -0.61
NCL-210ENST00000494618 C1QTNF2Q9BXJ5 285 aa11.21□□□□□ -0.61
NCL-210ENST00000494618 SMPD1P17405 629 aa11.2□□□□□ -0.62
NCL-210ENST00000494618 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
NCL-210ENST00000494618 CDK15Q96Q40 435 aa11.2□□□□□ -0.62
NCL-210ENST00000494618 TLL2Q9Y6L7 1015 aa11.2□□□□□ -0.62
NCL-210ENST00000494618 ZBBXA8MT70 800 aa11.19□□□□□ -0.62
NCL-210ENST00000494618 ERFEQ4G0M1 354 aa11.19□□□□□ -0.62
NCL-210ENST00000494618 CDV3Q9UKY7 258 aaKnown RBP11.19□□□□□ -0.62
NCL-210ENST00000494618 ADAM32Q8TC27 787 aa11.18□□□□□ -0.62
NCL-210ENST00000494618 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
NCL-210ENST00000494618 ZNF330Q9Y3S2 320 aaPredicted RBP11.18□□□□□ -0.62
NCL-210ENST00000494618 ADH1CP00326 375 aa11.17□□□□□ -0.62
NCL-210ENST00000494618 TRAF7Q6Q0C0 670 aa11.17□□□□□ -0.62
NCL-210ENST00000494618 VASH1Q7L8A9 365 aaPredicted RBP11.17□□□□□ -0.62
NCL-210ENST00000494618 TBC1D2BQ9UPU7 963 aa11.17□□□□□ -0.62
NCL-210ENST00000494618 AVPP01185 164 aa11.16□□□□□ -0.62
NCL-210ENST00000494618 MAP4K5Q9Y4K4 846 aa11.16□□□□□ -0.62
NCL-210ENST00000494618 NR5A1Q13285 461 aa11.15□□□□□ -0.62
NCL-210ENST00000494618 DZIP3Q86Y13 1208 aaKnown RBP11.15□□□□□ -0.62
NCL-210ENST00000494618 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
NCL-210ENST00000494618 OCSTAMPQ9BR26 566 aa11.15□□□□□ -0.62
NCL-210ENST00000494618 RAD21O60216 631 aa11.14□□□□□ -0.63
NCL-210ENST00000494618 FBXO45P0C2W1 286 aa11.14□□□□□ -0.63
NCL-210ENST00000494618 NR1H3Q13133 447 aa11.14□□□□□ -0.63
NCL-210ENST00000494618 CTC1Q2NKJ3 1217 aa11.14□□□□□ -0.63
NCL-210ENST00000494618 GDPD2Q9HCC8 539 aa11.14□□□□□ -0.63
NCL-210ENST00000494618 UBTFP17480 764 aaKnown RBP11.13□□□□□ -0.63
NCL-210ENST00000494618 ABL2P42684 1182 aa11.13□□□□□ -0.63
NCL-210ENST00000494618 MYT1Q01538 1121 aa11.13□□□□□ -0.63
NCL-210ENST00000494618 HPS1Q92902 700 aa11.13□□□□□ -0.63
NCL-210ENST00000494618 GRM5P41594 1212 aa11.12□□□□□ -0.63
NCL-210ENST00000494618 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
NCL-210ENST00000494618 NNTQ13423 1086 aa11.12□□□□□ -0.63
NCL-210ENST00000494618 NBPF20Q3BBV1 942 aa11.12□□□□□ -0.63
NCL-210ENST00000494618 AXIN1O15169 862 aa11.11□□□□□ -0.63
NCL-210ENST00000494618 WWC1Q8IX03 1113 aa11.11□□□□□ -0.63
NCL-210ENST00000494618 GPR37L1O60883 481 aa11.1□□□□□ -0.63
NCL-210ENST00000494618 FSHRP23945 695 aa11.1□□□□□ -0.63
NCL-210ENST00000494618 CRIPAKQ8N1N5 446 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms