RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
ITGB1-216ENST00000493758 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
ITGB1-216ENST00000493758 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
ITGB1-216ENST00000493758 GJD4Q96KN9 370 aaPredicted RBP9.51□□□□□ -0.89
ITGB1-216ENST00000493758 TRIM34Q9BYJ4 488 aa9.51□□□□□ -0.89
ITGB1-216ENST00000493758 HMX1Q9NP08 348 aaPredicted RBP9.51□□□□□ -0.89
ITGB1-216ENST00000493758 GDF9O60383 454 aa9.5□□□□□ -0.89
ITGB1-216ENST00000493758 SKOR1P84550 965 aa9.5□□□□□ -0.89
ITGB1-216ENST00000493758 MTMR14Q8NCE2 650 aa9.5□□□□□ -0.89
ITGB1-216ENST00000493758 PKD2L1Q9P0L9 805 aa9.5□□□□□ -0.89
ITGB1-216ENST00000493758 LAPTM4AQ15012 233 aa9.49□□□□□ -0.89
ITGB1-216ENST00000493758 FKBPLQ9UIM3 349 aa9.49□□□□□ -0.89
ITGB1-216ENST00000493758 SH3BP2P78314 561 aa9.48□□□□□ -0.89
ITGB1-216ENST00000493758 MCM6Q14566 821 aa9.48□□□□□ -0.89
ITGB1-216ENST00000493758 PNMA1Q8ND90 353 aa9.48□□□□□ -0.89
ITGB1-216ENST00000493758 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
ITGB1-216ENST00000493758 SH3RF1Q7Z6J0 888 aa9.47□□□□□ -0.89
ITGB1-216ENST00000493758 GPSM3Q9Y4H4 160 aa9.47□□□□□ -0.89
ITGB1-216ENST00000493758 GPR37L1O60883 481 aa9.46□□□□□ -0.9
ITGB1-216ENST00000493758 NR6A1Q15406 480 aa9.46□□□□□ -0.9
ITGB1-216ENST00000493758 BAP1Q92560 729 aa9.46□□□□□ -0.9
ITGB1-216ENST00000493758 NRG2O14511 850 aaPredicted RBP9.45□□□□□ -0.9
ITGB1-216ENST00000493758 PDXDC2PQ6P474 469 aa9.45□□□□□ -0.9
ITGB1-216ENST00000493758 MPNDQ8N594 471 aa9.45□□□□□ -0.9
ITGB1-216ENST00000493758 C1QTNF2Q9BXJ5 285 aa9.45□□□□□ -0.9
ITGB1-216ENST00000493758 RC3H1Q5TC82 1133 aaKnown RBP9.44□□□□□ -0.9
ITGB1-216ENST00000493758 BPHLQ86WA6 291 aaPredicted RBP9.44□□□□□ -0.9
ITGB1-216ENST00000493758 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
ITGB1-216ENST00000493758 LINC01559Q495D7 138 aa9.43□□□□□ -0.9
ITGB1-216ENST00000493758 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
ITGB1-216ENST00000493758 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
ITGB1-216ENST00000493758 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
ITGB1-216ENST00000493758 TOR4AQ9NXH8 423 aa9.43□□□□□ -0.9
ITGB1-216ENST00000493758 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
ITGB1-216ENST00000493758 NDUFB9Q9Y6M9 179 aa9.43□□□□□ -0.9
ITGB1-216ENST00000493758 SIAH2O43255 324 aa9.42□□□□□ -0.9
ITGB1-216ENST00000493758 FLIIQ13045 1269 aa9.42□□□□□ -0.9
ITGB1-216ENST00000493758 TRMT44Q8IYL2 757 aaKnown RBP9.42□□□□□ -0.9
ITGB1-216ENST00000493758 MRGPRX2Q96LB1 330 aa9.42□□□□□ -0.9
ITGB1-216ENST00000493758 EHBP1Q8NDI1 1231 aa9.41□□□□□ -0.9
ITGB1-216ENST00000493758 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
ITGB1-216ENST00000493758 TNFRSF10AO00220 468 aa9.39□□□□□ -0.91
ITGB1-216ENST00000493758 SNIP1Q8TAD8 396 aaKnown RBP9.39□□□□□ -0.91
ITGB1-216ENST00000493758 FOXJ1Q92949 421 aa9.39□□□□□ -0.91
ITGB1-216ENST00000493758 MAP4K5Q9Y4K4 846 aa9.39□□□□□ -0.91
ITGB1-216ENST00000493758 FOXC1Q12948 553 aa9.38□□□□□ -0.91
ITGB1-216ENST00000493758 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
ITGB1-216ENST00000493758 CDK15Q96Q40 435 aa9.38□□□□□ -0.91
ITGB1-216ENST00000493758 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
ITGB1-216ENST00000493758 GFRA3O60609 400 aa9.37□□□□□ -0.91
ITGB1-216ENST00000493758 PTK2Q05397 1052 aa9.37□□□□□ -0.91
ITGB1-216ENST00000493758 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
ITGB1-216ENST00000493758 CYP4X1Q8N118 509 aa9.36□□□□□ -0.91
ITGB1-216ENST00000493758 ARHGAP9Q9BRR9 750 aa9.36□□□□□ -0.91
ITGB1-216ENST00000493758 ERFEQ4G0M1 354 aa9.35□□□□□ -0.91
ITGB1-216ENST00000493758 CDV3Q9UKY7 258 aaKnown RBP9.35□□□□□ -0.91
ITGB1-216ENST00000493758 DGAT1O75907 488 aa9.34□□□□□ -0.91
ITGB1-216ENST00000493758 AVPP01185 164 aa9.34□□□□□ -0.91
ITGB1-216ENST00000493758 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
ITGB1-216ENST00000493758 ZBBXA8MT70 800 aa9.33□□□□□ -0.92
ITGB1-216ENST00000493758 SMPD1P17405 629 aa9.33□□□□□ -0.92
ITGB1-216ENST00000493758 AGERQ15109 404 aa9.33□□□□□ -0.92
ITGB1-216ENST00000493758 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
ITGB1-216ENST00000493758 TLL2Q9Y6L7 1015 aa9.33□□□□□ -0.92
ITGB1-216ENST00000493758 ADH1CP00326 375 aa9.32□□□□□ -0.92
ITGB1-216ENST00000493758 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
ITGB1-216ENST00000493758 NR1H3Q13133 447 aa9.32□□□□□ -0.92
ITGB1-216ENST00000493758 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
ITGB1-216ENST00000493758 ZNF592Q92610 1267 aa9.32□□□□□ -0.92
ITGB1-216ENST00000493758 MAGEB6P1A0A0J9YX57 407 aa9.31□□□□□ -0.92
ITGB1-216ENST00000493758 TTC24A2A3L6 582 aaPredicted RBP9.31□□□□□ -0.92
ITGB1-216ENST00000493758 IRF5Q13568 498 aa9.31□□□□□ -0.92
ITGB1-216ENST00000493758 SLC10A4Q96EP9 437 aa9.31□□□□□ -0.92
ITGB1-216ENST00000493758 COG6Q9Y2V7 657 aa9.31□□□□□ -0.92
ITGB1-216ENST00000493758 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
ITGB1-216ENST00000493758 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
ITGB1-216ENST00000493758 NR5A1Q13285 461 aa9.29□□□□□ -0.92
ITGB1-216ENST00000493758 ZBTB33Q86T24 672 aa9.29□□□□□ -0.92
ITGB1-216ENST00000493758 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
ITGB1-216ENST00000493758 FAM187AA6NFU0 413 aa9.28□□□□□ -0.92
ITGB1-216ENST00000493758 J3QL48 77 aa9.28□□□□□ -0.92
ITGB1-216ENST00000493758 ALDH1A1P00352 501 aa9.28□□□□□ -0.92
ITGB1-216ENST00000493758 CTC1Q2NKJ3 1217 aa9.28□□□□□ -0.92
ITGB1-216ENST00000493758 NBPF20Q3BBV1 942 aa9.28□□□□□ -0.92
ITGB1-216ENST00000493758 PKDCCQ504Y2 493 aa9.28□□□□□ -0.92
ITGB1-216ENST00000493758 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
ITGB1-216ENST00000493758 UBTFP17480 764 aaKnown RBP9.27□□□□□ -0.93
ITGB1-216ENST00000493758 GRM5P41594 1212 aa9.27□□□□□ -0.93
ITGB1-216ENST00000493758 WASHC4Q2M389 1173 aa9.27□□□□□ -0.93
ITGB1-216ENST00000493758 ZNF330Q9Y3S2 320 aaPredicted RBP9.27□□□□□ -0.93
ITGB1-216ENST00000493758 ESPNB1AK53 854 aa9.26□□□□□ -0.93
ITGB1-216ENST00000493758 SEPT12Q8IYM1 358 aa9.25□□□□□ -0.93
ITGB1-216ENST00000493758 WASF2Q9Y6W5 498 aa9.25□□□□□ -0.93
ITGB1-216ENST00000493758 LCE2BO14633 110 aa9.24□□□□□ -0.93
ITGB1-216ENST00000493758 RAD21O60216 631 aa9.24□□□□□ -0.93
ITGB1-216ENST00000493758 FSHRP23945 695 aa9.24□□□□□ -0.93
ITGB1-216ENST00000493758 MYT1Q01538 1121 aa9.24□□□□□ -0.93
ITGB1-216ENST00000493758 NNTQ13423 1086 aa9.24□□□□□ -0.93
ITGB1-216ENST00000493758 VASH1Q7L8A9 365 aaPredicted RBP9.24□□□□□ -0.93
ITGB1-216ENST00000493758 CCDC125Q86Z20 511 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms