RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 PNPLA6Q8IY17 1366 aa11.51□□□□□ -0.57
SF1-218ENST00000489544 NUTM2BA6NNL0 878 aaPredicted RBP11.5□□□□□ -0.57
SF1-218ENST00000489544 NUTM2EB1AL46 878 aaPredicted RBP11.5□□□□□ -0.57
SF1-218ENST00000489544 HDGFL2Q7Z4V5 671 aaPredicted RBP11.5□□□□□ -0.57
SF1-218ENST00000489544 NUTM2AQ8IVF1 878 aaPredicted RBP11.5□□□□□ -0.57
SF1-218ENST00000489544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.5□□□□□ -0.57
SF1-218ENST00000489544 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
SF1-218ENST00000489544 ZRANB1Q9UGI0 708 aa11.5□□□□□ -0.57
SF1-218ENST00000489544 SBNO1A3KN83 1393 aa11.5□□□□□ -0.57
SF1-218ENST00000489544 CCDC7Q96M83 1385 aa11.5□□□□□ -0.57
SF1-218ENST00000489544 JCADQ9P266 1359 aa11.5□□□□□ -0.57
SF1-218ENST00000489544 TNS3Q68CZ2 1445 aa11.5□□□□□ -0.57
SF1-218ENST00000489544 SSH2Q76I76 1423 aa11.5□□□□□ -0.57
SF1-218ENST00000489544 MYOM1P52179 1685 aa11.49□□□□□ -0.57
SF1-218ENST00000489544 TRPM3Q9HCF6 1732 aaPredicted RBP11.49□□□□□ -0.57
SF1-218ENST00000489544 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
SF1-218ENST00000489544 CARD14Q9BXL6 1004 aa11.49□□□□□ -0.57
SF1-218ENST00000489544 TERF2IPQ9NYB0 399 aa11.49□□□□□ -0.57
SF1-218ENST00000489544 TTC21BQ7Z4L5 1316 aa11.49□□□□□ -0.57
SF1-218ENST00000489544 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
SF1-218ENST00000489544 PANK3Q9H999 370 aa11.48□□□□□ -0.57
SF1-218ENST00000489544 ANKRD36BQ8N2N9 1353 aa11.48□□□□□ -0.57
SF1-218ENST00000489544 NINLQ9Y2I6 1382 aa11.48□□□□□ -0.57
SF1-218ENST00000489544 AKAP12Q02952 1782 aa11.47□□□□□ -0.57
SF1-218ENST00000489544 NME9Q86XW9 330 aa11.47□□□□□ -0.57
SF1-218ENST00000489544 LRP6O75581 1613 aa11.46□□□□□ -0.57
SF1-218ENST00000489544 MED1Q15648 1581 aaPredicted RBP11.46□□□□□ -0.57
SF1-218ENST00000489544 ADAMTS2O95450 1211 aa11.46□□□□□ -0.57
SF1-218ENST00000489544 MON2Q7Z3U7 1717 aa11.46□□□□□ -0.58
SF1-218ENST00000489544 ALS2Q96Q42 1657 aa11.46□□□□□ -0.58
SF1-218ENST00000489544 NRKQ7Z2Y5 1582 aa11.45□□□□□ -0.58
SF1-218ENST00000489544 NSD3Q9BZ95 1437 aa11.45□□□□□ -0.58
SF1-218ENST00000489544 ARHGEF10O15013 1369 aa11.45□□□□□ -0.58
SF1-218ENST00000489544 NLRP6P59044 892 aa11.45□□□□□ -0.58
SF1-218ENST00000489544 SHPRHQ149N8 1683 aa11.45□□□□□ -0.58
SF1-218ENST00000489544 EDC4Q6P2E9 1401 aaKnown RBP11.44□□□□□ -0.58
SF1-218ENST00000489544 SPATA31A6Q5VVP1 1343 aa11.44□□□□□ -0.58
SF1-218ENST00000489544 SOX12O15370 315 aa11.44□□□□□ -0.58
SF1-218ENST00000489544 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
SF1-218ENST00000489544 PIK3C2AO00443 1686 aa11.43□□□□□ -0.58
SF1-218ENST00000489544 TTC21AQ8NDW8 1320 aa11.43□□□□□ -0.58
SF1-218ENST00000489544 HAP1P54257 671 aaPredicted RBP11.43□□□□□ -0.58
SF1-218ENST00000489544 BRD4O60885 1362 aaPredicted RBP11.42□□□□□ -0.58
SF1-218ENST00000489544 FYB1O15117 783 aa11.42□□□□□ -0.58
SF1-218ENST00000489544 FBLN1P23142 703 aa11.42□□□□□ -0.58
SF1-218ENST00000489544 ZC3H6P61129 1189 aaKnown RBP11.42□□□□□ -0.58
SF1-218ENST00000489544 CNGB1Q14028 1251 aaPredicted RBP11.42□□□□□ -0.58
SF1-218ENST00000489544 NLRP13Q86W25 1043 aa11.42□□□□□ -0.58
SF1-218ENST00000489544 COL22A1Q8NFW1 1626 aaPredicted RBP11.42□□□□□ -0.58
SF1-218ENST00000489544 USP19O94966 1318 aa11.41□□□□□ -0.58
SF1-218ENST00000489544 GCP02774 474 aa11.41□□□□□ -0.58
SF1-218ENST00000489544 MEX3CQ5U5Q3 659 aaKnown RBP11.41□□□□□ -0.58
SF1-218ENST00000489544 C8orf37Q96NL8 207 aa11.41□□□□□ -0.58
SF1-218ENST00000489544 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.58
SF1-218ENST00000489544 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
SF1-218ENST00000489544 PER1O15534 1290 aaPredicted RBP11.4□□□□□ -0.58
SF1-218ENST00000489544 DDX10Q13206 875 aaKnown RBP11.4□□□□□ -0.58
SF1-218ENST00000489544 CHRNA2Q15822 529 aa11.4□□□□□ -0.58
SF1-218ENST00000489544 USP31Q70CQ4 1352 aa11.4□□□□□ -0.59
SF1-218ENST00000489544 OVOS2A0A0J9YW53 1432 aa11.39□□□□□ -0.59
SF1-218ENST00000489544 OVOS2Q6IE36 1432 aa11.39□□□□□ -0.59
SF1-218ENST00000489544 ABCA3Q99758 1704 aa11.39□□□□□ -0.59
SF1-218ENST00000489544 MARF1Q9Y4F3 1742 aaKnown RBP11.39□□□□□ -0.59
SF1-218ENST00000489544 CRYBG1Q9Y4K1 1723 aa11.39□□□□□ -0.59
SF1-218ENST00000489544 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
SF1-218ENST00000489544 COG3Q96JB2 828 aa11.38□□□□□ -0.59
SF1-218ENST00000489544 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
SF1-218ENST00000489544 KIAA0232Q92628 1395 aa11.38□□□□□ -0.59
SF1-218ENST00000489544 PHRF1Q9P1Y6 1649 aaKnown RBP11.38□□□□□ -0.59
SF1-218ENST00000489544 CGNL1Q0VF96 1302 aa11.37□□□□□ -0.59
SF1-218ENST00000489544 SLIT3O75094 1523 aa11.37□□□□□ -0.59
SF1-218ENST00000489544 TNNT2P45379 298 aaPredicted RBP11.37□□□□□ -0.59
SF1-218ENST00000489544 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
SF1-218ENST00000489544 CC2D1BQ5T0F9 858 aaKnown RBP11.37□□□□□ -0.59
SF1-218ENST00000489544 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
SF1-218ENST00000489544 PRDM11Q9NQV5 511 aa11.36□□□□□ -0.59
SF1-218ENST00000489544 RGS17Q9UGC6 210 aaPredicted RBP11.36□□□□□ -0.59
SF1-218ENST00000489544 AFF2P51816 1311 aa11.35□□□□□ -0.59
SF1-218ENST00000489544 RRS1Q15050 365 aaKnown RBP11.35□□□□□ -0.59
SF1-218ENST00000489544 KIF20BQ96Q89 1820 aa11.35□□□□□ -0.59
SF1-218ENST00000489544 NFAT5O94916 1531 aa11.35□□□□□ -0.59
SF1-218ENST00000489544 ARHGEF25Q86VW2 580 aa11.34□□□□□ -0.59
SF1-218ENST00000489544 KCNH5Q8NCM2 988 aa11.34□□□□□ -0.59
SF1-218ENST00000489544 MORC1Q86VD1 984 aa11.33□□□□□ -0.6
SF1-218ENST00000489544 FNBP4Q8N3X1 1017 aaPredicted RBP11.33□□□□□ -0.6
SF1-218ENST00000489544 BTG4Q9NY30 223 aa11.33□□□□□ -0.6
SF1-218ENST00000489544 AXIN2Q9Y2T1 843 aa11.33□□□□□ -0.6
SF1-218ENST00000489544 USP54Q70EL1 1684 aa11.33□□□□□ -0.6
SF1-218ENST00000489544 MAP3K19Q56UN5 1328 aa11.33□□□□□ -0.6
SF1-218ENST00000489544 CPDO75976 1380 aa11.32□□□□□ -0.6
SF1-218ENST00000489544 SLIT2O94813 1529 aa11.32□□□□□ -0.6
SF1-218ENST00000489544 POTEAQ6S8J7 498 aa11.32□□□□□ -0.6
SF1-218ENST00000489544 USP21Q9UK80 565 aa11.32□□□□□ -0.6
SF1-218ENST00000489544 EMILIN1Q9Y6C2 1016 aa11.32□□□□□ -0.6
SF1-218ENST00000489544 BCL9LQ86UU0 1499 aa11.32□□□□□ -0.6
SF1-218ENST00000489544 CAMTA1Q9Y6Y1 1673 aa11.31□□□□□ -0.6
SF1-218ENST00000489544 STRN4Q9NRL3 753 aa11.31□□□□□ -0.6
SF1-218ENST00000489544 NSD2O96028 1365 aa11.3□□□□□ -0.6
SF1-218ENST00000489544 PPM1GO15355 546 aaPredicted RBP11.3□□□□□ -0.6
SF1-218ENST00000489544 UNC5CLQ8IV45 518 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms