RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 KCNH2Q12809 1159 aa7.58□□□□□ -1.2
KDM3A-213ENST00000488971 BAP1Q92560 729 aa7.58□□□□□ -1.2
KDM3A-213ENST00000488971 TERTO14746 1132 aaKnown RBP7.57□□□□□ -1.2
KDM3A-213ENST00000488971 CAPN5O15484 640 aaPredicted RBP7.57□□□□□ -1.2
KDM3A-213ENST00000488971 PDE4DQ08499 809 aa7.57□□□□□ -1.2
KDM3A-213ENST00000488971 CTHP32929 405 aa7.56□□□□□ -1.2
KDM3A-213ENST00000488971 DIXDC1Q155Q3 683 aa7.56□□□□□ -1.2
KDM3A-213ENST00000488971 IL27Q8NEV9 243 aa7.56□□□□□ -1.2
KDM3A-213ENST00000488971 TBC1D2Q9BYX2 928 aa7.56□□□□□ -1.2
KDM3A-213ENST00000488971 BMP1P13497 986 aa7.55□□□□□ -1.2
KDM3A-213ENST00000488971 INSM1Q01101 510 aaPredicted RBP7.55□□□□□ -1.2
KDM3A-213ENST00000488971 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
KDM3A-213ENST00000488971 PLEKHG3A1L390 1219 aa7.54□□□□□ -1.2
KDM3A-213ENST00000488971 RSBN1LQ6PCB5 846 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-213ENST00000488971 ZNF511Q8NB15 262 aa7.54□□□□□ -1.2
KDM3A-213ENST00000488971 TLL2Q9Y6L7 1015 aa7.54□□□□□ -1.2
KDM3A-213ENST00000488971 VARSP26640 1264 aaKnown RBP7.53□□□□□ -1.2
KDM3A-213ENST00000488971 GJA5P36382 358 aa7.53□□□□□ -1.2
KDM3A-213ENST00000488971 PARP9Q8IXQ6 854 aa7.53□□□□□ -1.2
KDM3A-213ENST00000488971 SLC16A10Q8TF71 515 aa7.53□□□□□ -1.2
KDM3A-213ENST00000488971 WIPF1O43516 503 aa7.52□□□□□ -1.21
KDM3A-213ENST00000488971 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
KDM3A-213ENST00000488971 PCDHB15Q9Y5E8 787 aa7.52□□□□□ -1.21
KDM3A-213ENST00000488971 SPTLC1O15269 473 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 NNTQ13423 1086 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 LYPD8Q6UX82 237 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 ZMYND15Q9H091 742 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 ZBTB3Q9H5J0 574 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 STK17AQ9UEE5 414 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 CFAP99D6REC4 459 aa7.5□□□□□ -1.21
KDM3A-213ENST00000488971 RIC3Q7Z5B4 369 aa7.5□□□□□ -1.21
KDM3A-213ENST00000488971 FAM174AQ8TBP5 190 aa7.5□□□□□ -1.21
KDM3A-213ENST00000488971 NXF1Q9UBU9 619 aaKnown RBP7.5□□□□□ -1.21
KDM3A-213ENST00000488971 HRCP23327 699 aa7.49□□□□□ -1.21
KDM3A-213ENST00000488971 ARID5BQ14865 1188 aa7.49□□□□□ -1.21
KDM3A-213ENST00000488971 AGERQ15109 404 aa7.49□□□□□ -1.21
KDM3A-213ENST00000488971 TSC1Q92574 1164 aa7.49□□□□□ -1.21
KDM3A-213ENST00000488971 WDR4P57081 412 aaKnown RBP7.48□□□□□ -1.21
KDM3A-213ENST00000488971 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 MPNDQ8N594 471 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 CABLES1Q8TDN4 633 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 DDRGK1Q96HY6 314 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 ZFP42Q96MM3 310 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 FAM117AQ9C073 453 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 RSPH6AQ9H0K4 717 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 MAP10Q9P2G4 905 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 NUTM2BA6NNL0 878 aaPredicted RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 NUTM2EB1AL46 878 aaPredicted RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 VEGFBP49765 207 aa7.47□□□□□ -1.21
KDM3A-213ENST00000488971 SCARF1Q14162 830 aa7.47□□□□□ -1.21
KDM3A-213ENST00000488971 NUTM2DQ5VT03 806 aaPredicted RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 PRPF38BQ5VTL8 546 aaKnown RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 NUTM2AQ8IVF1 878 aaPredicted RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 ADH1CP00326 375 aa7.46□□□□□ -1.22
KDM3A-213ENST00000488971 MRPL14Q6P1L8 145 aaKnown RBP7.46□□□□□ -1.22
KDM3A-213ENST00000488971 FOXJ1Q92949 421 aa7.46□□□□□ -1.22
KDM3A-213ENST00000488971 F12P00748 615 aaPredicted RBP7.45□□□□□ -1.22
KDM3A-213ENST00000488971 TIMP2P16035 220 aa7.45□□□□□ -1.22
KDM3A-213ENST00000488971 IRF7Q92985 503 aa7.45□□□□□ -1.22
KDM3A-213ENST00000488971 PURBQ96QR8 312 aaKnown RBP7.45□□□□□ -1.22
KDM3A-213ENST00000488971 BPHLQ86WA6 291 aaPredicted RBP7.44□□□□□ -1.22
KDM3A-213ENST00000488971 NPAS3Q8IXF0 933 aa7.44□□□□□ -1.22
KDM3A-213ENST00000488971 PER1O15534 1290 aaPredicted RBP7.43□□□□□ -1.22
KDM3A-213ENST00000488971 GMPRP36959 345 aa7.43□□□□□ -1.22
KDM3A-213ENST00000488971 ARMC2Q8NEN0 867 aa7.43□□□□□ -1.22
KDM3A-213ENST00000488971 GOPCQ9HD26 462 aa7.43□□□□□ -1.22
KDM3A-213ENST00000488971 LIMD1Q9UGP4 676 aa7.43□□□□□ -1.22
KDM3A-213ENST00000488971 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
KDM3A-213ENST00000488971 H3BM21 787 aa7.42□□□□□ -1.22
KDM3A-213ENST00000488971 ZIC2O95409 532 aaPredicted RBP7.42□□□□□ -1.22
KDM3A-213ENST00000488971 MYSM1Q5VVJ2 828 aa7.42□□□□□ -1.22
KDM3A-213ENST00000488971 CDK15Q96Q40 435 aa7.42□□□□□ -1.22
KDM3A-213ENST00000488971 NR5A1Q13285 461 aa7.41□□□□□ -1.22
KDM3A-213ENST00000488971 QPCTQ16769 361 aa7.41□□□□□ -1.22
KDM3A-213ENST00000488971 HELBQ8NG08 1087 aaPredicted RBP7.41□□□□□ -1.22
KDM3A-213ENST00000488971 SOBPA7XYQ1 873 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 LILRB3O75022 631 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 C4orf48Q5BLP8 95 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 C6orf118Q5T5N4 469 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 ITPKCQ96DU7 683 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 KLF16Q9BXK1 252 aaPredicted RBP7.4□□□□□ -1.22
KDM3A-213ENST00000488971 ZFAND3Q9H8U3 227 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 UPP2O95045 317 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 NR3C2P08235 984 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 UBTFP17480 764 aaKnown RBP7.39□□□□□ -1.23
KDM3A-213ENST00000488971 FLIIQ13045 1269 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 TUSC1Q2TAM9 212 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 NBPF14Q5TI25 921 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 ZSCAN1Q8NBB4 408 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 ERBB4Q15303 1308 aa7.38□□□□□ -1.23
KDM3A-213ENST00000488971 MAN1A2O60476 641 aa7.38□□□□□ -1.23
KDM3A-213ENST00000488971 BMP2P12643 396 aa7.38□□□□□ -1.23
KDM3A-213ENST00000488971 GRM5P41594 1212 aa7.38□□□□□ -1.23
KDM3A-213ENST00000488971 CLK2P49760 499 aaKnown RBP7.38□□□□□ -1.23
KDM3A-213ENST00000488971 RTL5Q5HYW3 569 aaPredicted RBP7.38□□□□□ -1.23
KDM3A-213ENST00000488971 MAGEB6P1A0A0J9YX57 407 aa7.37□□□□□ -1.23
KDM3A-213ENST00000488971 VASH1Q7L8A9 365 aaPredicted RBP7.37□□□□□ -1.23
KDM3A-213ENST00000488971 POLR3EQ9NVU0 708 aa7.37□□□□□ -1.23
KDM3A-213ENST00000488971 FSHRP23945 695 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms