RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 POLKQ9UBT6 870 aa8.86□□□□□ -0.99
RN7SL561P-201ENST00000488553 PIK3R4Q99570 1358 aa8.86□□□□□ -0.99
RN7SL561P-201ENST00000488553 COL3A1P02461 1466 aaPredicted RBP8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 DIAPH1O60610 1272 aaKnown RBP8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 ANKLE2Q86XL3 938 aa8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 NME9Q86XW9 330 aa8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 DMRT2Q9Y5R5 561 aa8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 ADGRB2O60241 1585 aa8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 DIP2AQ14689 1571 aa8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 CDC42BPGQ6DT37 1551 aa8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
RN7SL561P-201ENST00000488553 PTCH1Q13635 1447 aa8.84□□□□□ -0.99
RN7SL561P-201ENST00000488553 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
RN7SL561P-201ENST00000488553 ZRANB1Q9UGI0 708 aa8.84□□□□□ -0.99
RN7SL561P-201ENST00000488553 ADAMTSL3P82987 1691 aa8.84□□□□□ -0.99
RN7SL561P-201ENST00000488553 AATKQ6ZMQ8 1374 aa8.84□□□□□ -0.99
RN7SL561P-201ENST00000488553 ACEP12821 1306 aa8.83□□□□□ -1
RN7SL561P-201ENST00000488553 CEP170BQ9Y4F5 1589 aaPredicted RBP8.83□□□□□ -1
RN7SL561P-201ENST00000488553 FCHSD2O94868 740 aa8.83□□□□□ -1
RN7SL561P-201ENST00000488553 FBLN1P23142 703 aa8.83□□□□□ -1
RN7SL561P-201ENST00000488553 EXOC6Q8TAG9 804 aa8.83□□□□□ -1
RN7SL561P-201ENST00000488553 COG3Q96JB2 828 aa8.83□□□□□ -1
RN7SL561P-201ENST00000488553 PNNQ9H307 717 aaKnown RBP8.83□□□□□ -1
RN7SL561P-201ENST00000488553 RRP7AQ9Y3A4 280 aaKnown RBP8.83□□□□□ -1
RN7SL561P-201ENST00000488553 IQSEC2Q5JU85 1478 aa8.83□□□□□ -1
RN7SL561P-201ENST00000488553 ANKRD26Q9UPS8 1709 aa8.83□□□□□ -1
RN7SL561P-201ENST00000488553 TTC21BQ7Z4L5 1316 aa8.82□□□□□ -1
RN7SL561P-201ENST00000488553 U2SURPO15042 1029 aaKnown RBP8.82□□□□□ -1
RN7SL561P-201ENST00000488553 PLIN1O60240 522 aa8.82□□□□□ -1
RN7SL561P-201ENST00000488553 KCNA6P17658 529 aa8.82□□□□□ -1
RN7SL561P-201ENST00000488553 RIMS1Q86UR5 1692 aaKnown RBP8.81□□□□□ -1
RN7SL561P-201ENST00000488553 SSH2Q76I76 1423 aa8.81□□□□□ -1
RN7SL561P-201ENST00000488553 IL13P35225 146 aa8.81□□□□□ -1
RN7SL561P-201ENST00000488553 TMPOP42166 694 aaKnown RBP8.81□□□□□ -1
RN7SL561P-201ENST00000488553 NEUROD2Q15784 382 aa8.81□□□□□ -1
RN7SL561P-201ENST00000488553 CCDC136Q96JN2 1154 aa8.81□□□□□ -1
RN7SL561P-201ENST00000488553 NKTRP30414 1462 aaKnown RBP8.81□□□□□ -1
RN7SL561P-201ENST00000488553 NUTM2FA1L443 756 aa8.8□□□□□ -1
RN7SL561P-201ENST00000488553 TRIM35Q9UPQ4 493 aa8.8□□□□□ -1
RN7SL561P-201ENST00000488553 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
RN7SL561P-201ENST00000488553 PPM1GO15355 546 aaPredicted RBP8.79□□□□□ -1
RN7SL561P-201ENST00000488553 C20orf194Q5TEA3 1177 aa8.79□□□□□ -1
RN7SL561P-201ENST00000488553 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.79□□□□□ -1
RN7SL561P-201ENST00000488553 CRBNQ96SW2 442 aa8.79□□□□□ -1
RN7SL561P-201ENST00000488553 RSPH6AQ9H0K4 717 aa8.79□□□□□ -1
RN7SL561P-201ENST00000488553 KIF20BQ96Q89 1820 aa8.79□□□□□ -1
RN7SL561P-201ENST00000488553 XRN1Q8IZH2 1706 aaKnown RBP8.79□□□□□ -1
RN7SL561P-201ENST00000488553 USP6P35125 1406 aa8.79□□□□□ -1
RN7SL561P-201ENST00000488553 ANKARQ7Z5J8 1434 aa8.79□□□□□ -1
RN7SL561P-201ENST00000488553 IL16Q14005 1332 aa8.79□□□□□ -1
RN7SL561P-201ENST00000488553 TTC21AQ8NDW8 1320 aa8.79□□□□□ -1
RN7SL561P-201ENST00000488553 MON2Q7Z3U7 1717 aa8.78□□□□□ -1
RN7SL561P-201ENST00000488553 BCAR3O75815 825 aa8.78□□□□□ -1
RN7SL561P-201ENST00000488553 NGDNQ8NEJ9 315 aaKnown RBP8.78□□□□□ -1
RN7SL561P-201ENST00000488553 PMFBP1Q8TBY8 1022 aa8.78□□□□□ -1
RN7SL561P-201ENST00000488553 MYH16Q9H6N6 1097 aa8.78□□□□□ -1
RN7SL561P-201ENST00000488553 AKAP12Q02952 1782 aa8.78□□□□□ -1
RN7SL561P-201ENST00000488553 TOPAZ1Q8N9V7 1692 aa8.78□□□□□ -1
RN7SL561P-201ENST00000488553 MAPK8IP3Q9UPT6 1336 aa8.78□□□□□ -1
RN7SL561P-201ENST00000488553 USP31Q70CQ4 1352 aa8.77□□□□□ -1.01
RN7SL561P-201ENST00000488553 RIPK4P57078 832 aa8.77□□□□□ -1.01
RN7SL561P-201ENST00000488553 RRS1Q15050 365 aaKnown RBP8.77□□□□□ -1.01
RN7SL561P-201ENST00000488553 ZNF142P52746 1687 aaPredicted RBP8.77□□□□□ -1.01
RN7SL561P-201ENST00000488553 OVOS2A0A0J9YW53 1432 aa8.77□□□□□ -1.01
RN7SL561P-201ENST00000488553 OVOS2Q6IE36 1432 aa8.77□□□□□ -1.01
RN7SL561P-201ENST00000488553 CDK12Q9NYV4 1490 aaPredicted RBP8.77□□□□□ -1.01
RN7SL561P-201ENST00000488553 PRKAR2BP31323 418 aa8.76□□□□□ -1.01
RN7SL561P-201ENST00000488553 RARSP54136 660 aaKnown RBP8.76□□□□□ -1.01
RN7SL561P-201ENST00000488553 PHACTR3Q96KR7 559 aa8.76□□□□□ -1.01
RN7SL561P-201ENST00000488553 NPHP4O75161 1426 aaPredicted RBP8.76□□□□□ -1.01
RN7SL561P-201ENST00000488553 CT47B1P0C2W7 299 aaPredicted RBP8.75□□□□□ -1.01
RN7SL561P-201ENST00000488553 PDE3AQ14432 1141 aa8.75□□□□□ -1.01
RN7SL561P-201ENST00000488553 NFE2L2Q16236 605 aa8.75□□□□□ -1.01
RN7SL561P-201ENST00000488553 RBM19Q9Y4C8 960 aaKnown RBP8.75□□□□□ -1.01
RN7SL561P-201ENST00000488553 NRKQ7Z2Y5 1582 aa8.74□□□□□ -1.01
RN7SL561P-201ENST00000488553 NEFMP07197 916 aa8.74□□□□□ -1.01
RN7SL561P-201ENST00000488553 HMOX1P09601 288 aa8.74□□□□□ -1.01
RN7SL561P-201ENST00000488553 EIF4A2Q14240 407 aaKnown RBP8.74□□□□□ -1.01
RN7SL561P-201ENST00000488553 ITSN1Q15811 1721 aa8.74□□□□□ -1.01
RN7SL561P-201ENST00000488553 EXOSC9Q06265 439 aaKnown RBP8.73□□□□□ -1.01
RN7SL561P-201ENST00000488553 PHF8Q9UPP1 1060 aa8.73□□□□□ -1.01
RN7SL561P-201ENST00000488553 SETD1BQ9UPS6 1966 aaKnown RBP8.73□□□□□ -1.01
RN7SL561P-201ENST00000488553 FANCIQ9NVI1 1328 aa8.73□□□□□ -1.01
RN7SL561P-201ENST00000488553 CHD2O14647 1828 aaKnown RBP8.73□□□□□ -1.01
RN7SL561P-201ENST00000488553 ZNF853P0CG23 659 aa8.72□□□□□ -1.01
RN7SL561P-201ENST00000488553 NLRP6P59044 892 aa8.72□□□□□ -1.01
RN7SL561P-201ENST00000488553 CALD1Q05682 793 aaKnown RBP8.72□□□□□ -1.01
RN7SL561P-201ENST00000488553 HSP90AB2PQ58FF8 381 aa8.72□□□□□ -1.01
RN7SL561P-201ENST00000488553 TSR2Q969E8 191 aaKnown RBP8.72□□□□□ -1.01
RN7SL561P-201ENST00000488553 RBM33Q96EV2 1170 aaKnown RBP8.72□□□□□ -1.01
RN7SL561P-201ENST00000488553 MAP3K19Q56UN5 1328 aa8.72□□□□□ -1.01
RN7SL561P-201ENST00000488553 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.01
RN7SL561P-201ENST00000488553 FMN2Q9NZ56 1722 aa8.71□□□□□ -1.01
RN7SL561P-201ENST00000488553 MAP2P11137 1827 aaKnown RBP8.71□□□□□ -1.01
RN7SL561P-201ENST00000488553 LRRC7Q96NW7 1537 aa8.71□□□□□ -1.01
RN7SL561P-201ENST00000488553 LMOD3Q0VAK6 560 aa8.7□□□□□ -1.02
RN7SL561P-201ENST00000488553 AAMPQ13685 434 aa8.7□□□□□ -1.02
RN7SL561P-201ENST00000488553 SULT6B1Q6IMI4 303 aa8.7□□□□□ -1.02
RN7SL561P-201ENST00000488553 PROSER2Q86WR7 435 aaPredicted RBP8.7□□□□□ -1.02
RN7SL561P-201ENST00000488553 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms