RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 TOR4AQ9NXH8 423 aa10.18□□□□□ -0.78
BRCA1-217ENST00000487825 TTC24A2A3L6 582 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-217ENST00000487825 PER1O15534 1290 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-217ENST00000487825 WNT7BP56706 349 aa10.17□□□□□ -0.78
BRCA1-217ENST00000487825 SKIV2LQ15477 1246 aaKnown RBP10.17□□□□□ -0.78
BRCA1-217ENST00000487825 RC3H1Q5TC82 1133 aaKnown RBP10.17□□□□□ -0.78
BRCA1-217ENST00000487825 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-217ENST00000487825 LINC01559Q495D7 138 aa10.16□□□□□ -0.78
BRCA1-217ENST00000487825 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
BRCA1-217ENST00000487825 MYT1Q01538 1121 aa10.15□□□□□ -0.78
BRCA1-217ENST00000487825 SH3D19Q5HYK7 790 aa10.15□□□□□ -0.78
BRCA1-217ENST00000487825 BAP1Q92560 729 aa10.15□□□□□ -0.78
BRCA1-217ENST00000487825 MAP10Q9P2G4 905 aa10.15□□□□□ -0.78
BRCA1-217ENST00000487825 SNIP1Q8TAD8 396 aaKnown RBP10.14□□□□□ -0.79
BRCA1-217ENST00000487825 SH3BP2P78314 561 aa10.13□□□□□ -0.79
BRCA1-217ENST00000487825 IL27Q8NEV9 243 aa10.13□□□□□ -0.79
BRCA1-217ENST00000487825 HELBQ8NG08 1087 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-217ENST00000487825 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
BRCA1-217ENST00000487825 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-217ENST00000487825 FBXO31Q5XUX0 539 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-217ENST00000487825 EHBP1Q8NDI1 1231 aa10.12□□□□□ -0.79
BRCA1-217ENST00000487825 J3QL48 77 aa10.11□□□□□ -0.79
BRCA1-217ENST00000487825 F12P00748 615 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-217ENST00000487825 ST8SIA5O15466 376 aa10.1□□□□□ -0.79
BRCA1-217ENST00000487825 SMPD1P17405 629 aa10.09□□□□□ -0.79
BRCA1-217ENST00000487825 CTDSPL2Q05D32 466 aa10.09□□□□□ -0.79
BRCA1-217ENST00000487825 ZNF511Q8NB15 262 aa10.09□□□□□ -0.79
BRCA1-217ENST00000487825 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
BRCA1-217ENST00000487825 ALDH1A1P00352 501 aa10.08□□□□□ -0.8
BRCA1-217ENST00000487825 CUX2O14529 1486 aa10.07□□□□□ -0.8
BRCA1-217ENST00000487825 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
BRCA1-217ENST00000487825 SIAH2O43255 324 aa10.06□□□□□ -0.8
BRCA1-217ENST00000487825 PRKCSHP14314 528 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-217ENST00000487825 FOXJ1Q92949 421 aa10.05□□□□□ -0.8
BRCA1-217ENST00000487825 AP1G2O75843 785 aa10.04□□□□□ -0.8
BRCA1-217ENST00000487825 AVPP01185 164 aa10.04□□□□□ -0.8
BRCA1-217ENST00000487825 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
BRCA1-217ENST00000487825 ZNF787Q6DD87 383 aa10.04□□□□□ -0.8
BRCA1-217ENST00000487825 LRRN4Q8WUT4 740 aa10.04□□□□□ -0.8
BRCA1-217ENST00000487825 HPS1Q92902 700 aa10.04□□□□□ -0.8
BRCA1-217ENST00000487825 AXIN1O15169 862 aa10.03□□□□□ -0.8
BRCA1-217ENST00000487825 AGERQ15109 404 aa10.03□□□□□ -0.8
BRCA1-217ENST00000487825 PCMTD1Q96MG8 357 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-217ENST00000487825 DACH1Q9UI36 760 aa10.03□□□□□ -0.8
BRCA1-217ENST00000487825 VARSP26640 1264 aaKnown RBP10.02□□□□□ -0.81
BRCA1-217ENST00000487825 TLL2Q9Y6L7 1015 aa10.02□□□□□ -0.81
BRCA1-217ENST00000487825 POTECB2RU33 542 aa10.01□□□□□ -0.81
BRCA1-217ENST00000487825 CRIPAKQ8N1N5 446 aa10.01□□□□□ -0.81
BRCA1-217ENST00000487825 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
BRCA1-217ENST00000487825 WASF2Q9Y6W5 498 aa10.01□□□□□ -0.81
BRCA1-217ENST00000487825 CTC1Q2NKJ3 1217 aa10□□□□□ -0.81
BRCA1-217ENST00000487825 ARMC2Q8NEN0 867 aa10□□□□□ -0.81
BRCA1-217ENST00000487825 RFC5P40937 340 aa9.99□□□□□ -0.81
BRCA1-217ENST00000487825 NR6A1Q15406 480 aa9.99□□□□□ -0.81
BRCA1-217ENST00000487825 C4orf48Q5BLP8 95 aa9.99□□□□□ -0.81
BRCA1-217ENST00000487825 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-217ENST00000487825 ARID5BQ14865 1188 aa9.98□□□□□ -0.81
BRCA1-217ENST00000487825 NBPF14Q5TI25 921 aa9.98□□□□□ -0.81
BRCA1-217ENST00000487825 BPHLQ86WA6 291 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-217ENST00000487825 FAM174AQ8TBP5 190 aa9.98□□□□□ -0.81
BRCA1-217ENST00000487825 MAGEB6P1A0A0J9YX57 407 aa9.96□□□□□ -0.82
BRCA1-217ENST00000487825 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
BRCA1-217ENST00000487825 EPS8L1Q8TE68 723 aa9.95□□□□□ -0.82
BRCA1-217ENST00000487825 CARD14Q9BXL6 1004 aa9.95□□□□□ -0.82
BRCA1-217ENST00000487825 HMX1Q9NP08 348 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-217ENST00000487825 NNTQ13423 1086 aa9.93□□□□□ -0.82
BRCA1-217ENST00000487825 SH3BP5LQ7L8J4 393 aa9.93□□□□□ -0.82
BRCA1-217ENST00000487825 SH3RF1Q7Z6J0 888 aa9.93□□□□□ -0.82
BRCA1-217ENST00000487825 GMPR2Q9P2T1 348 aaKnown RBP9.93□□□□□ -0.82
BRCA1-217ENST00000487825 FKBPLQ9UIM3 349 aa9.93□□□□□ -0.82
BRCA1-217ENST00000487825 MPNDQ8N594 471 aa9.92□□□□□ -0.82
BRCA1-217ENST00000487825 ADH1CP00326 375 aa9.91□□□□□ -0.82
BRCA1-217ENST00000487825 TMEM259Q4ZIN3 620 aa9.91□□□□□ -0.82
BRCA1-217ENST00000487825 GPKOWQ92917 476 aaPredicted RBP eCLIP9.91□□□□□ -0.82
BRCA1-217ENST00000487825 CDK15Q96Q40 435 aa9.91□□□□□ -0.82
BRCA1-217ENST00000487825 ATP13A2Q9NQ11 1180 aa9.91□□□□□ -0.82
BRCA1-217ENST00000487825 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-217ENST00000487825 CAPN5O15484 640 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-217ENST00000487825 PDXDC2PQ6P474 469 aa9.89□□□□□ -0.83
BRCA1-217ENST00000487825 ARHGAP9Q9BRR9 750 aa9.89□□□□□ -0.83
BRCA1-217ENST00000487825 C1QTNF2Q9BXJ5 285 aa9.89□□□□□ -0.83
BRCA1-217ENST00000487825 GRM5P41594 1212 aa9.88□□□□□ -0.83
BRCA1-217ENST00000487825 SCRIBQ14160 1630 aa9.88□□□□□ -0.83
BRCA1-217ENST00000487825 NR3C2P08235 984 aa9.87□□□□□ -0.83
BRCA1-217ENST00000487825 BMP1P13497 986 aa9.87□□□□□ -0.83
BRCA1-217ENST00000487825 WDR4P57081 412 aaKnown RBP9.87□□□□□ -0.83
BRCA1-217ENST00000487825 ERFEQ4G0M1 354 aa9.87□□□□□ -0.83
BRCA1-217ENST00000487825 VASH1Q7L8A9 365 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-217ENST00000487825 ZBTB33Q86T24 672 aa9.86□□□□□ -0.83
BRCA1-217ENST00000487825 ZNF775Q96BV0 537 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-217ENST00000487825 TRIM34Q9BYJ4 488 aa9.86□□□□□ -0.83
BRCA1-217ENST00000487825 ZC3H4Q9UPT8 1303 aaKnown RBP9.85□□□□□ -0.83
BRCA1-217ENST00000487825 FSHRP23945 695 aa9.85□□□□□ -0.83
BRCA1-217ENST00000487825 PTK2Q05397 1052 aa9.85□□□□□ -0.83
BRCA1-217ENST00000487825 NR5A1Q13285 461 aa9.85□□□□□ -0.83
BRCA1-217ENST00000487825 TRMT44Q8IYL2 757 aaKnown RBP9.85□□□□□ -0.83
BRCA1-217ENST00000487825 PNMA1Q8ND90 353 aa9.85□□□□□ -0.83
BRCA1-217ENST00000487825 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
BRCA1-217ENST00000487825 SNRPBP14678 240 aaKnown RBP9.84□□□□□ -0.83
BRCA1-217ENST00000487825 TIMP2P16035 220 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms