RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 RPGRIP1LQ68CZ1 1315 aa23.36■■□□□ 1.33
U2AF1-211ENST00000486519 ABCC11Q96J66 1382 aa23.36■■□□□ 1.33
U2AF1-211ENST00000486519 CASZ1Q86V15 1759 aa23.35■■□□□ 1.33
U2AF1-211ENST00000486519 MYOM1P52179 1685 aa23.35■■□□□ 1.33
U2AF1-211ENST00000486519 FAM196AQ6ZSG2 479 aa23.33■■□□□ 1.33
U2AF1-211ENST00000486519 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
U2AF1-211ENST00000486519 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.32
U2AF1-211ENST00000486519 SPATA31A1Q5TZJ5 1347 aa23.32■■□□□ 1.32
U2AF1-211ENST00000486519 C1QTNF8P60827 252 aa23.31■■□□□ 1.32
U2AF1-211ENST00000486519 CHD4Q14839 1912 aa23.3■■□□□ 1.32
U2AF1-211ENST00000486519 DCAF8L1A6NGE4 600 aa23.3■■□□□ 1.32
U2AF1-211ENST00000486519 PDGFDQ9GZP0 370 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-211ENST00000486519 YTHDC2Q9H6S0 1430 aaKnown RBP23.3■■□□□ 1.32
U2AF1-211ENST00000486519 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
U2AF1-211ENST00000486519 NBPF14Q5TI25 921 aa23.29■■□□□ 1.32
U2AF1-211ENST00000486519 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
U2AF1-211ENST00000486519 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
U2AF1-211ENST00000486519 CHRNA2Q15822 529 aa23.24■■□□□ 1.31
U2AF1-211ENST00000486519 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
U2AF1-211ENST00000486519 PIK3C2GO75747 1445 aa23.23■■□□□ 1.31
U2AF1-211ENST00000486519 PHRF1Q9P1Y6 1649 aaKnown RBP23.22■■□□□ 1.31
U2AF1-211ENST00000486519 PRDM11Q9NQV5 511 aa23.22■■□□□ 1.31
U2AF1-211ENST00000486519 USP35Q9P2H5 1018 aa23.22■■□□□ 1.31
U2AF1-211ENST00000486519 SBF2Q86WG5 1849 aa23.2■■□□□ 1.3
U2AF1-211ENST00000486519 KIAA0232Q92628 1395 aa23.2■■□□□ 1.3
U2AF1-211ENST00000486519 RGL3Q3MIN7 710 aa23.2■■□□□ 1.3
U2AF1-211ENST00000486519 PTGER2P43116 358 aa23.19■■□□□ 1.3
U2AF1-211ENST00000486519 SPATA31E1Q6ZUB1 1445 aa23.18■■□□□ 1.3
U2AF1-211ENST00000486519 ZBTB7AO95365 584 aa23.18■■□□□ 1.3
U2AF1-211ENST00000486519 PEAK1Q9H792 1746 aa23.18■■□□□ 1.3
U2AF1-211ENST00000486519 ANKARQ7Z5J8 1434 aa23.17■■□□□ 1.3
U2AF1-211ENST00000486519 RGPD3A6NKT7 1758 aaPredicted RBP23.17■■□□□ 1.3
U2AF1-211ENST00000486519 RGPD4Q7Z3J3 1758 aa23.17■■□□□ 1.3
U2AF1-211ENST00000486519 PRR36Q9H6K5 1346 aa23.17■■□□□ 1.3
U2AF1-211ENST00000486519 CEP350Q5VT06 3117 aa23.17■■□□□ 1.3
U2AF1-211ENST00000486519 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
U2AF1-211ENST00000486519 PDE3BQ13370 1112 aa23.15■■□□□ 1.3
U2AF1-211ENST00000486519 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
U2AF1-211ENST00000486519 SIRT1Q96EB6 747 aa23.15■■□□□ 1.3
U2AF1-211ENST00000486519 PRAM1Q96QH2 718 aa23.15■■□□□ 1.3
U2AF1-211ENST00000486519 ATF5Q9Y2D1 282 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-211ENST00000486519 SSH2Q76I76 1423 aa23.14■■□□□ 1.29
U2AF1-211ENST00000486519 FHDC1Q9C0D6 1143 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-211ENST00000486519 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
U2AF1-211ENST00000486519 BARGINQ6ZT62 677 aa23.12■■□□□ 1.29
U2AF1-211ENST00000486519 ZC3H6P61129 1189 aaKnown RBP23.11■■□□□ 1.29
U2AF1-211ENST00000486519 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
U2AF1-211ENST00000486519 SYT17Q9BSW7 474 aa23.11■■□□□ 1.29
U2AF1-211ENST00000486519 GPRASP1Q5JY77 1395 aa23.11■■□□□ 1.29
U2AF1-211ENST00000486519 ANKRD30BQ9BXX2 1392 aa23.11■■□□□ 1.29
U2AF1-211ENST00000486519 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
U2AF1-211ENST00000486519 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
U2AF1-211ENST00000486519 LMO7Q8WWI1 1683 aa23.09■■□□□ 1.29
U2AF1-211ENST00000486519 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
U2AF1-211ENST00000486519 CFAP70Q5T0N1 1121 aa23.08■■□□□ 1.29
U2AF1-211ENST00000486519 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
U2AF1-211ENST00000486519 NUTM2GQ5VZR2 741 aa23.07■■□□□ 1.28
U2AF1-211ENST00000486519 PROM2Q8N271 834 aa23.07■■□□□ 1.28
U2AF1-211ENST00000486519 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
U2AF1-211ENST00000486519 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
U2AF1-211ENST00000486519 LRRC37A3O60309 1634 aa23.05■■□□□ 1.28
U2AF1-211ENST00000486519 SHANK3Q9BYB0 1731 aa23.05■■□□□ 1.28
U2AF1-211ENST00000486519 DLC1Q96QB1 1528 aa23.04■■□□□ 1.28
U2AF1-211ENST00000486519 TCP11L2Q8N4U5 519 aa23.04■■□□□ 1.28
U2AF1-211ENST00000486519 SGIP1Q9BQI5 828 aa23.04■■□□□ 1.28
U2AF1-211ENST00000486519 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
U2AF1-211ENST00000486519 PLSCR1O15162 318 aa23.02■■□□□ 1.28
U2AF1-211ENST00000486519 EVA1CP58658 441 aa23.02■■□□□ 1.28
U2AF1-211ENST00000486519 MINK1Q8N4C8 1332 aaPredicted RBP23.02■■□□□ 1.28
U2AF1-211ENST00000486519 GIGYF1O75420 1035 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-211ENST00000486519 NGDNQ8NEJ9 315 aaKnown RBP23■■□□□ 1.27
U2AF1-211ENST00000486519 BCL11BQ9C0K0 894 aaPredicted RBP23■■□□□ 1.27
U2AF1-211ENST00000486519 POGKQ9P215 609 aa23■■□□□ 1.27
U2AF1-211ENST00000486519 OVOS2A0A0G2JMS6 1433 aa22.99■■□□□ 1.27
U2AF1-211ENST00000486519 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
U2AF1-211ENST00000486519 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
U2AF1-211ENST00000486519 ATP7BP35670 1465 aa22.98■■□□□ 1.27
U2AF1-211ENST00000486519 WNK3Q9BYP7 1800 aa22.97■■□□□ 1.27
U2AF1-211ENST00000486519 ADGRB1O14514 1584 aa22.97■■□□□ 1.27
U2AF1-211ENST00000486519 ITSN1Q15811 1721 aa22.96■■□□□ 1.27
U2AF1-211ENST00000486519 COL5A2P05997 1499 aaPredicted RBP22.95■■□□□ 1.26
U2AF1-211ENST00000486519 AKAP12Q02952 1782 aa22.94■■□□□ 1.26
U2AF1-211ENST00000486519 GOLGB1Q14789 3259 aaKnown RBP22.93■■□□□ 1.26
U2AF1-211ENST00000486519 TRAK1Q9UPV9 953 aa22.93■■□□□ 1.26
U2AF1-211ENST00000486519 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
U2AF1-211ENST00000486519 THRAP3Q9Y2W1 955 aaKnown RBP22.92■■□□□ 1.26
U2AF1-211ENST00000486519 SLC15A2Q16348 729 aa22.91■■□□□ 1.26
U2AF1-211ENST00000486519 MTFR1LQ9H019 292 aa22.91■■□□□ 1.26
U2AF1-211ENST00000486519 CPDO75976 1380 aa22.89■■□□□ 1.26
U2AF1-211ENST00000486519 TXNRD1Q16881 649 aa22.89■■□□□ 1.25
U2AF1-211ENST00000486519 ARXQ96QS3 562 aa22.89■■□□□ 1.25
U2AF1-211ENST00000486519 STK32BQ9NY57 414 aa22.89■■□□□ 1.25
U2AF1-211ENST00000486519 TOPAZ1Q8N9V7 1692 aa22.89■■□□□ 1.25
U2AF1-211ENST00000486519 GPR162Q16538 588 aa22.88■■□□□ 1.25
U2AF1-211ENST00000486519 MARCH10Q8NA82 808 aaPredicted RBP22.88■■□□□ 1.25
U2AF1-211ENST00000486519 EIF3AQ14152 1382 aaKnown RBP22.88■■□□□ 1.25
U2AF1-211ENST00000486519 MAP3K5Q99683 1374 aa22.88■■□□□ 1.25
U2AF1-211ENST00000486519 PAPPAQ13219 1627 aa22.87■■□□□ 1.25
U2AF1-211ENST00000486519 CRB1P82279 1406 aa22.87■■□□□ 1.25
U2AF1-211ENST00000486519 USP19O94966 1318 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms