RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 RFC5P40937 340 aa10.55□□□□□ -0.72
SMARCC1-207ENST00000485833 SH3BP2P78314 561 aa10.54□□□□□ -0.72
SMARCC1-207ENST00000485833 LINC01559Q495D7 138 aa10.54□□□□□ -0.72
SMARCC1-207ENST00000485833 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
SMARCC1-207ENST00000485833 BAP1Q92560 729 aa10.54□□□□□ -0.72
SMARCC1-207ENST00000485833 AP1G2O75843 785 aa10.53□□□□□ -0.72
SMARCC1-207ENST00000485833 MRGPRX2Q96LB1 330 aa10.53□□□□□ -0.72
SMARCC1-207ENST00000485833 CYP4X1Q8N118 509 aa10.52□□□□□ -0.73
SMARCC1-207ENST00000485833 ZNF511Q8NB15 262 aa10.52□□□□□ -0.73
SMARCC1-207ENST00000485833 TOR4AQ9NXH8 423 aa10.52□□□□□ -0.73
SMARCC1-207ENST00000485833 LRRN4Q8WUT4 740 aa10.51□□□□□ -0.73
SMARCC1-207ENST00000485833 FAM187AA6NFU0 413 aa10.5□□□□□ -0.73
SMARCC1-207ENST00000485833 USP17L8P0C7I0 530 aa10.5□□□□□ -0.73
SMARCC1-207ENST00000485833 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
SMARCC1-207ENST00000485833 PKDCCQ504Y2 493 aa10.49□□□□□ -0.73
SMARCC1-207ENST00000485833 ARMC2Q8NEN0 867 aa10.49□□□□□ -0.73
SMARCC1-207ENST00000485833 TTC24A2A3L6 582 aaPredicted RBP10.48□□□□□ -0.73
SMARCC1-207ENST00000485833 DGAT1O75907 488 aa10.48□□□□□ -0.73
SMARCC1-207ENST00000485833 TMEM259Q4ZIN3 620 aa10.48□□□□□ -0.73
SMARCC1-207ENST00000485833 SNIP1Q8TAD8 396 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-207ENST00000485833 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
SMARCC1-207ENST00000485833 LCE2BO14633 110 aa10.45□□□□□ -0.74
SMARCC1-207ENST00000485833 SIAH2O43255 324 aa10.45□□□□□ -0.74
SMARCC1-207ENST00000485833 VARSP26640 1264 aaKnown RBP10.45□□□□□ -0.74
SMARCC1-207ENST00000485833 NR6A1Q15406 480 aa10.45□□□□□ -0.74
SMARCC1-207ENST00000485833 TRAF7Q6Q0C0 670 aa10.44□□□□□ -0.74
SMARCC1-207ENST00000485833 GPKOWQ92917 476 aaPredicted RBP eCLIP10.44□□□□□ -0.74
SMARCC1-207ENST00000485833 FOXJ1Q92949 421 aa10.44□□□□□ -0.74
SMARCC1-207ENST00000485833 HMX1Q9NP08 348 aaPredicted RBP10.44□□□□□ -0.74
SMARCC1-207ENST00000485833 BPHLQ86WA6 291 aaPredicted RBP10.43□□□□□ -0.74
SMARCC1-207ENST00000485833 J3QL48 77 aa10.42□□□□□ -0.74
SMARCC1-207ENST00000485833 SMPD1P17405 629 aa10.42□□□□□ -0.74
SMARCC1-207ENST00000485833 AGERQ15109 404 aa10.42□□□□□ -0.74
SMARCC1-207ENST00000485833 FKBPLQ9UIM3 349 aa10.42□□□□□ -0.74
SMARCC1-207ENST00000485833 ZC3H4Q9UPT8 1303 aaKnown RBP10.41□□□□□ -0.74
SMARCC1-207ENST00000485833 ALDH1A1P00352 501 aa10.41□□□□□ -0.74
SMARCC1-207ENST00000485833 MYT1Q01538 1121 aa10.41□□□□□ -0.74
SMARCC1-207ENST00000485833 TLL2Q9Y6L7 1015 aa10.41□□□□□ -0.74
SMARCC1-207ENST00000485833 AVPP01185 164 aa10.4□□□□□ -0.74
SMARCC1-207ENST00000485833 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
SMARCC1-207ENST00000485833 SH3BP5LQ7L8J4 393 aa10.4□□□□□ -0.74
SMARCC1-207ENST00000485833 SH3RF1Q7Z6J0 888 aa10.4□□□□□ -0.74
SMARCC1-207ENST00000485833 FAM174AQ8TBP5 190 aa10.4□□□□□ -0.74
SMARCC1-207ENST00000485833 EPS8L1Q8TE68 723 aa10.4□□□□□ -0.74
SMARCC1-207ENST00000485833 MPNDQ8N594 471 aa10.39□□□□□ -0.75
SMARCC1-207ENST00000485833 PNMA1Q8ND90 353 aa10.39□□□□□ -0.75
SMARCC1-207ENST00000485833 BANK1Q8NDB2 785 aa10.39□□□□□ -0.75
SMARCC1-207ENST00000485833 PDXDC2PQ6P474 469 aa10.38□□□□□ -0.75
SMARCC1-207ENST00000485833 TRIM34Q9BYJ4 488 aa10.38□□□□□ -0.75
SMARCC1-207ENST00000485833 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
SMARCC1-207ENST00000485833 C1QTNF2Q9BXJ5 285 aa10.37□□□□□ -0.75
SMARCC1-207ENST00000485833 WASF2Q9Y6W5 498 aa10.37□□□□□ -0.75
SMARCC1-207ENST00000485833 MAGEB6P1A0A0J9YX57 407 aa10.36□□□□□ -0.75
SMARCC1-207ENST00000485833 SOCS7O14512 581 aa10.36□□□□□ -0.75
SMARCC1-207ENST00000485833 CTC1Q2NKJ3 1217 aa10.36□□□□□ -0.75
SMARCC1-207ENST00000485833 GJD4Q96KN9 370 aaPredicted RBP10.36□□□□□ -0.75
SMARCC1-207ENST00000485833 HPS1Q92902 700 aa10.35□□□□□ -0.75
SMARCC1-207ENST00000485833 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
SMARCC1-207ENST00000485833 CARD14Q9BXL6 1004 aa10.35□□□□□ -0.75
SMARCC1-207ENST00000485833 AAASQ9NRG9 546 aa10.35□□□□□ -0.75
SMARCC1-207ENST00000485833 ST8SIA5O15466 376 aa10.34□□□□□ -0.75
SMARCC1-207ENST00000485833 SMCPP49901 116 aaPredicted RBP10.34□□□□□ -0.75
SMARCC1-207ENST00000485833 TRMT44Q8IYL2 757 aaKnown RBP10.34□□□□□ -0.75
SMARCC1-207ENST00000485833 CDK15Q96Q40 435 aa10.34□□□□□ -0.75
SMARCC1-207ENST00000485833 PTK2Q05397 1052 aa10.33□□□□□ -0.76
SMARCC1-207ENST00000485833 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
SMARCC1-207ENST00000485833 GPSM3Q9Y4H4 160 aa10.33□□□□□ -0.76
SMARCC1-207ENST00000485833 AXIN1O15169 862 aa10.32□□□□□ -0.76
SMARCC1-207ENST00000485833 ADH1CP00326 375 aa10.32□□□□□ -0.76
SMARCC1-207ENST00000485833 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
SMARCC1-207ENST00000485833 ERFEQ4G0M1 354 aa10.32□□□□□ -0.76
SMARCC1-207ENST00000485833 APBB1O00213 710 aa10.31□□□□□ -0.76
SMARCC1-207ENST00000485833 SNRKQ9NRH2 765 aa10.31□□□□□ -0.76
SMARCC1-207ENST00000485833 MAP4K5Q9Y4K4 846 aa10.31□□□□□ -0.76
SMARCC1-207ENST00000485833 NNTQ13423 1086 aa10.3□□□□□ -0.76
SMARCC1-207ENST00000485833 ZBTB33Q86T24 672 aa10.3□□□□□ -0.76
SMARCC1-207ENST00000485833 OCSTAMPQ9BR26 566 aa10.3□□□□□ -0.76
SMARCC1-207ENST00000485833 VASH1Q7L8A9 365 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-207ENST00000485833 SLC10A4Q96EP9 437 aa10.28□□□□□ -0.76
SMARCC1-207ENST00000485833 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
SMARCC1-207ENST00000485833 NR5A1Q13285 461 aa10.27□□□□□ -0.77
SMARCC1-207ENST00000485833 ADAM32Q8TC27 787 aa10.27□□□□□ -0.77
SMARCC1-207ENST00000485833 FSHRP23945 695 aa10.26□□□□□ -0.77
SMARCC1-207ENST00000485833 GRM5P41594 1212 aa10.26□□□□□ -0.77
SMARCC1-207ENST00000485833 TMEM132AQ24JP5 1023 aa10.26□□□□□ -0.77
SMARCC1-207ENST00000485833 CDV3Q9UKY7 258 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-207ENST00000485833 DACH1Q9UI36 760 aa10.25□□□□□ -0.77
SMARCC1-207ENST00000485833 ZBBXA8MT70 800 aa10.24□□□□□ -0.77
SMARCC1-207ENST00000485833 CAPN5O15484 640 aaPredicted RBP10.24□□□□□ -0.77
SMARCC1-207ENST00000485833 GPR37L1O60883 481 aa10.24□□□□□ -0.77
SMARCC1-207ENST00000485833 NR3C2P08235 984 aa10.24□□□□□ -0.77
SMARCC1-207ENST00000485833 FBXO45P0C2W1 286 aa10.22□□□□□ -0.77
SMARCC1-207ENST00000485833 TIMP2P16035 220 aa10.22□□□□□ -0.77
SMARCC1-207ENST00000485833 WDR4P57081 412 aaKnown RBP10.22□□□□□ -0.77
SMARCC1-207ENST00000485833 ZNF787Q6DD87 383 aa10.22□□□□□ -0.77
SMARCC1-207ENST00000485833 KLF16Q9BXK1 252 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-207ENST00000485833 ATP13A2Q9NQ11 1180 aa10.22□□□□□ -0.77
SMARCC1-207ENST00000485833 MCM6Q14566 821 aa10.21□□□□□ -0.77
SMARCC1-207ENST00000485833 DZIP3Q86Y13 1208 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-207ENST00000485833 KCTD15Q96SI1 283 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms