RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
CALD1-220ENST00000482470 ANKRD36BQ8N2N9 1353 aa11.42□□□□□ -0.58
CALD1-220ENST00000482470 CROCC2H7BZ55 1655 aa11.42□□□□□ -0.58
CALD1-220ENST00000482470 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
CALD1-220ENST00000482470 NOL8Q76FK4 1167 aaKnown RBP11.42□□□□□ -0.58
CALD1-220ENST00000482470 A0A1W2PP64 1363 aa11.42□□□□□ -0.58
CALD1-220ENST00000482470 MCM10Q7L590 875 aa11.41□□□□□ -0.58
CALD1-220ENST00000482470 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
CALD1-220ENST00000482470 ZCCHC11Q5TAX3 1644 aaKnown RBP11.41□□□□□ -0.58
CALD1-220ENST00000482470 NFE2L2Q16236 605 aa11.41□□□□□ -0.58
CALD1-220ENST00000482470 PTPRTO14522 1441 aa11.41□□□□□ -0.58
CALD1-220ENST00000482470 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
CALD1-220ENST00000482470 WASLO00401 505 aaPredicted RBP11.41□□□□□ -0.58
CALD1-220ENST00000482470 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
CALD1-220ENST00000482470 API5Q9BZZ5 524 aaKnown RBP11.41□□□□□ -0.58
CALD1-220ENST00000482470 TSPYL4Q9UJ04 414 aa11.41□□□□□ -0.58
CALD1-220ENST00000482470 ZMYM4Q5VZL5 1548 aa11.4□□□□□ -0.58
CALD1-220ENST00000482470 PHACTR3Q96KR7 559 aa11.4□□□□□ -0.58
CALD1-220ENST00000482470 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
CALD1-220ENST00000482470 KDM2BQ8NHM5 1336 aa11.4□□□□□ -0.59
CALD1-220ENST00000482470 PRDM15P57071 1507 aaPredicted RBP11.4□□□□□ -0.59
CALD1-220ENST00000482470 TRIM6-TRIM34B2RNG4 842 aa11.4□□□□□ -0.59
CALD1-220ENST00000482470 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
CALD1-220ENST00000482470 ZNF521Q96K83 1311 aa11.39□□□□□ -0.59
CALD1-220ENST00000482470 FOXD4L5Q5VV16 416 aaPredicted RBP11.39□□□□□ -0.59
CALD1-220ENST00000482470 FOXD4L4Q8WXT5 416 aaPredicted RBP11.39□□□□□ -0.59
CALD1-220ENST00000482470 POLKQ9UBT6 870 aa11.39□□□□□ -0.59
CALD1-220ENST00000482470 BRPF3Q9ULD4 1205 aa11.39□□□□□ -0.59
CALD1-220ENST00000482470 NPC1L1Q9UHC9 1359 aa11.39□□□□□ -0.59
CALD1-220ENST00000482470 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
CALD1-220ENST00000482470 FKBP5Q13451 457 aaPredicted RBP11.38□□□□□ -0.59
CALD1-220ENST00000482470 AAMPQ13685 434 aa11.38□□□□□ -0.59
CALD1-220ENST00000482470 ZNF428Q96B54 188 aa11.38□□□□□ -0.59
CALD1-220ENST00000482470 A0A0G2JS52 829 aa11.38□□□□□ -0.59
CALD1-220ENST00000482470 TRPM1Q7Z4N2 1603 aa11.38□□□□□ -0.59
CALD1-220ENST00000482470 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
CALD1-220ENST00000482470 UHRF1BP1LA0JNW5 1464 aa11.38□□□□□ -0.59
CALD1-220ENST00000482470 SLC4A2P04920 1241 aa11.37□□□□□ -0.59
CALD1-220ENST00000482470 CT47B1P0C2W7 299 aaPredicted RBP11.37□□□□□ -0.59
CALD1-220ENST00000482470 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
CALD1-220ENST00000482470 RILPL2Q969X0 211 aa11.37□□□□□ -0.59
CALD1-220ENST00000482470 CHD1LQ86WJ1 897 aa11.36□□□□□ -0.59
CALD1-220ENST00000482470 NINLQ9Y2I6 1382 aa11.36□□□□□ -0.59
CALD1-220ENST00000482470 YEATS2Q9ULM3 1422 aa11.36□□□□□ -0.59
CALD1-220ENST00000482470 HMMRO75330 724 aa11.36□□□□□ -0.59
CALD1-220ENST00000482470 ABTB2Q8N961 1025 aa11.36□□□□□ -0.59
CALD1-220ENST00000482470 TRPM2O94759 1503 aa11.36□□□□□ -0.59
CALD1-220ENST00000482470 KRT24Q2M2I5 525 aa11.36□□□□□ -0.59
CALD1-220ENST00000482470 TRIM44Q96DX7 344 aaPredicted RBP11.36□□□□□ -0.59
CALD1-220ENST00000482470 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
CALD1-220ENST00000482470 ZFYVE16Q7Z3T8 1539 aa11.36□□□□□ -0.59
CALD1-220ENST00000482470 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
CALD1-220ENST00000482470 IQGAP3Q86VI3 1631 aa11.35□□□□□ -0.59
CALD1-220ENST00000482470 HSP90AB2PQ58FF8 381 aa11.35□□□□□ -0.59
CALD1-220ENST00000482470 TRMT2AQ8IZ69 625 aaKnown RBP11.35□□□□□ -0.59
CALD1-220ENST00000482470 MBIPQ9NS73 344 aa11.35□□□□□ -0.59
CALD1-220ENST00000482470 POGZQ7Z3K3 1410 aa11.35□□□□□ -0.59
CALD1-220ENST00000482470 FOXD4L6Q3SYB3 417 aaPredicted RBP11.35□□□□□ -0.59
CALD1-220ENST00000482470 FOXD4L3Q6VB84 417 aaPredicted RBP11.35□□□□□ -0.59
CALD1-220ENST00000482470 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
CALD1-220ENST00000482470 NSD2O96028 1365 aa11.34□□□□□ -0.59
CALD1-220ENST00000482470 C8orf58Q8NAV2 365 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 PSME1Q06323 249 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 TBC1D2Q9BYX2 928 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 CHMP5Q9NZZ3 219 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 CLTCL1P53675 1640 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 UNC13BO14795 1591 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 PLXNC1O60486 1568 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 F6X3S4 739 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
CALD1-220ENST00000482470 YTHDC2Q9H6S0 1430 aaKnown RBP11.33□□□□□ -0.6
CALD1-220ENST00000482470 XPCQ01831 940 aaPredicted RBP11.32□□□□□ -0.6
CALD1-220ENST00000482470 SMARCA5O60264 1052 aaPredicted RBP11.32□□□□□ -0.6
CALD1-220ENST00000482470 CSB-PGBD3P0DP91 1061 aa11.32□□□□□ -0.6
CALD1-220ENST00000482470 AMOTL2Q9Y2J4 779 aa11.32□□□□□ -0.6
CALD1-220ENST00000482470 KCNJ4P48050 445 aa11.32□□□□□ -0.6
CALD1-220ENST00000482470 ACEP12821 1306 aa11.32□□□□□ -0.6
CALD1-220ENST00000482470 L1TD1Q5T7N2 865 aaKnown RBP11.31□□□□□ -0.6
CALD1-220ENST00000482470 USHBP1Q8N6Y0 703 aa11.31□□□□□ -0.6
CALD1-220ENST00000482470 TEFQ10587 303 aa11.31□□□□□ -0.6
CALD1-220ENST00000482470 GCC1Q96CN9 775 aa11.3□□□□□ -0.6
CALD1-220ENST00000482470 IFT57Q9NWB7 429 aa11.3□□□□□ -0.6
CALD1-220ENST00000482470 INSRP06213 1382 aa11.3□□□□□ -0.6
CALD1-220ENST00000482470 ABCC11Q96J66 1382 aa11.3□□□□□ -0.6
CALD1-220ENST00000482470 ALDH1L2Q3SY69 923 aa11.3□□□□□ -0.6
CALD1-220ENST00000482470 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
CALD1-220ENST00000482470 RSPH6AQ9H0K4 717 aa11.3□□□□□ -0.6
CALD1-220ENST00000482470 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
CALD1-220ENST00000482470 VAMP4O75379 141 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 CFAP44Q96MT7 982 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
CALD1-220ENST00000482470 RIMS2Q9UQ26 1411 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 SBNO2Q9Y2G9 1366 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 PPIP5K1Q6PFW1 1433 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 FOXO3O43524 673 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 CDC45O75419 566 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 E9PCH4 1651 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 MCCP23508 829 aa11.29□□□□□ -0.6
CALD1-220ENST00000482470 TBC1D32Q96NH3 1257 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms