RNA–Protein interactions for RNA: ENST00000479992.5

RPL13A-209, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-209ENST00000479992 EIF4G2P78344 907 aaKnown RBP eCLIP22.39■■□□□ 1.17
RPL13A-209ENST00000479992 RGS17Q9UGC6 210 aaPredicted RBP22.39■■□□□ 1.17
RPL13A-209ENST00000479992 HAP1P54257 671 aaPredicted RBP22.38■■□□□ 1.17
RPL13A-209ENST00000479992 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
RPL13A-209ENST00000479992 AKAP12Q02952 1782 aa22.36■■□□□ 1.17
RPL13A-209ENST00000479992 NUTM2GQ5VZR2 741 aa22.36■■□□□ 1.17
RPL13A-209ENST00000479992 CPSF1Q10570 1443 aaKnown RBP22.36■■□□□ 1.17
RPL13A-209ENST00000479992 CD163L1Q9NR16 1453 aa22.35■■□□□ 1.17
RPL13A-209ENST00000479992 SSH2Q76I76 1423 aa22.35■■□□□ 1.17
RPL13A-209ENST00000479992 SLC12A5Q9H2X9 1139 aa22.35■■□□□ 1.17
RPL13A-209ENST00000479992 KTN1Q86UP2 1357 aaKnown RBP22.35■■□□□ 1.17
RPL13A-209ENST00000479992 AFF2P51816 1311 aa22.34■■□□□ 1.17
RPL13A-209ENST00000479992 BRD4O60885 1362 aaPredicted RBP22.34■■□□□ 1.17
RPL13A-209ENST00000479992 CRYBG1Q9Y4K1 1723 aa22.34■■□□□ 1.17
RPL13A-209ENST00000479992 NRKQ7Z2Y5 1582 aa22.33■■□□□ 1.17
RPL13A-209ENST00000479992 ABTB2Q8N961 1025 aa22.33■■□□□ 1.17
RPL13A-209ENST00000479992 NGLY1Q96IV0 654 aa22.33■■□□□ 1.17
RPL13A-209ENST00000479992 MARF1Q9Y4F3 1742 aaKnown RBP22.33■■□□□ 1.17
RPL13A-209ENST00000479992 MON2Q7Z3U7 1717 aa22.32■■□□□ 1.16
RPL13A-209ENST00000479992 ZNF692Q9BU19 519 aaPredicted RBP22.32■■□□□ 1.16
RPL13A-209ENST00000479992 NINLQ9Y2I6 1382 aa22.32■■□□□ 1.16
RPL13A-209ENST00000479992 PHRF1Q9P1Y6 1649 aaKnown RBP22.31■■□□□ 1.16
RPL13A-209ENST00000479992 A0A1W2PP64 1363 aa22.31■■□□□ 1.16
RPL13A-209ENST00000479992 CDCA8Q53HL2 280 aa22.31■■□□□ 1.16
RPL13A-209ENST00000479992 ILDR2Q71H61 639 aa22.31■■□□□ 1.16
RPL13A-209ENST00000479992 HDGFL2Q7Z4V5 671 aaPredicted RBP22.31■■□□□ 1.16
RPL13A-209ENST00000479992 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
RPL13A-209ENST00000479992 ZNF772Q68DY9 489 aaPredicted RBP22.3■■□□□ 1.16
RPL13A-209ENST00000479992 POTEAQ6S8J7 498 aa22.3■■□□□ 1.16
RPL13A-209ENST00000479992 TTC21BQ7Z4L5 1316 aa22.3■■□□□ 1.16
RPL13A-209ENST00000479992 TERF2IPQ9NYB0 399 aa22.29■■□□□ 1.16
RPL13A-209ENST00000479992 MYOM1P52179 1685 aa22.26■■□□□ 1.15
RPL13A-209ENST00000479992 NLRP6P59044 892 aa22.26■■□□□ 1.15
RPL13A-209ENST00000479992 NLRP13Q86W25 1043 aa22.26■■□□□ 1.15
RPL13A-209ENST00000479992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.26■■□□□ 1.15
RPL13A-209ENST00000479992 POLR3GLQ9BT43 218 aa22.26■■□□□ 1.15
RPL13A-209ENST00000479992 USP19O94966 1318 aa22.26■■□□□ 1.15
RPL13A-209ENST00000479992 TTC21AQ8NDW8 1320 aa22.26■■□□□ 1.15
RPL13A-209ENST00000479992 EDC4Q6P2E9 1401 aaKnown RBP22.25■■□□□ 1.15
RPL13A-209ENST00000479992 FNBP4Q8N3X1 1017 aaPredicted RBP22.25■■□□□ 1.15
RPL13A-209ENST00000479992 USP21Q9UK80 565 aa22.25■■□□□ 1.15
RPL13A-209ENST00000479992 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
RPL13A-209ENST00000479992 PLCH1Q4KWH8 1693 aa22.23■■□□□ 1.15
RPL13A-209ENST00000479992 SLIT2O94813 1529 aa22.23■■□□□ 1.15
RPL13A-209ENST00000479992 KIAA0232Q92628 1395 aa22.22■■□□□ 1.15
RPL13A-209ENST00000479992 BCL9LQ86UU0 1499 aa22.22■■□□□ 1.15
RPL13A-209ENST00000479992 SLIT3O75094 1523 aa22.21■■□□□ 1.15
RPL13A-209ENST00000479992 FAM83GA6ND36 823 aa22.21■■□□□ 1.15
RPL13A-209ENST00000479992 ZC3H6P61129 1189 aaKnown RBP22.21■■□□□ 1.15
RPL13A-209ENST00000479992 NME9Q86XW9 330 aa22.21■■□□□ 1.15
RPL13A-209ENST00000479992 PRDM11Q9NQV5 511 aa22.21■■□□□ 1.15
RPL13A-209ENST00000479992 C11orf95C9JLR9 678 aaPredicted RBP22.2■■□□□ 1.14
RPL13A-209ENST00000479992 QTRT2Q9H974 415 aaKnown RBP22.2■■□□□ 1.14
RPL13A-209ENST00000479992 ZRANB1Q9UGI0 708 aa22.2■■□□□ 1.14
RPL13A-209ENST00000479992 COL14A1Q05707 1796 aaKnown RBP22.2■■□□□ 1.14
RPL13A-209ENST00000479992 GCP02774 474 aa22.19■■□□□ 1.14
RPL13A-209ENST00000479992 CHRNA2Q15822 529 aa22.18■■□□□ 1.14
RPL13A-209ENST00000479992 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.17■■□□□ 1.14
RPL13A-209ENST00000479992 NWD2Q9ULI1 1742 aa22.17■■□□□ 1.14
RPL13A-209ENST00000479992 ATRNO75882 1429 aa22.17■■□□□ 1.14
RPL13A-209ENST00000479992 SOX12O15370 315 aa22.17■■□□□ 1.14
RPL13A-209ENST00000479992 UNC5CLQ8IV45 518 aa22.17■■□□□ 1.14
RPL13A-209ENST00000479992 TRPC5Q9UL62 973 aaPredicted RBP22.17■■□□□ 1.14
RPL13A-209ENST00000479992 BTG4Q9NY30 223 aa22.16■■□□□ 1.14
RPL13A-209ENST00000479992 CPDO75976 1380 aa22.15■■□□□ 1.14
RPL13A-209ENST00000479992 USP31Q70CQ4 1352 aa22.15■■□□□ 1.14
RPL13A-209ENST00000479992 USP54Q70EL1 1684 aa22.15■■□□□ 1.14
RPL13A-209ENST00000479992 ZBTB7CA1YPR0 619 aa22.15■■□□□ 1.14
RPL13A-209ENST00000479992 RXRBP28702 533 aa22.15■■□□□ 1.14
RPL13A-209ENST00000479992 OVOS2A0A0J9YW53 1432 aa22.14■■□□□ 1.14
RPL13A-209ENST00000479992 OVOS2Q6IE36 1432 aa22.14■■□□□ 1.14
RPL13A-209ENST00000479992 NRAPQ86VF7 1730 aa22.14■■□□□ 1.14
RPL13A-209ENST00000479992 NSD3Q9BZ95 1437 aa22.14■■□□□ 1.13
RPL13A-209ENST00000479992 NFAT5O94916 1531 aa22.13■■□□□ 1.13
RPL13A-209ENST00000479992 KIF7Q2M1P5 1343 aa22.12■■□□□ 1.13
RPL13A-209ENST00000479992 RBM6P78332 1123 aaKnown RBP22.12■■□□□ 1.13
RPL13A-209ENST00000479992 KCNH5Q8NCM2 988 aa22.12■■□□□ 1.13
RPL13A-209ENST00000479992 CARD14Q9BXL6 1004 aa22.11■■□□□ 1.13
RPL13A-209ENST00000479992 LMO7Q8WWI1 1683 aa22.11■■□□□ 1.13
RPL13A-209ENST00000479992 CCDC9Q9Y3X0 531 aaKnown RBP22.1■■□□□ 1.13
RPL13A-209ENST00000479992 VPS72Q15906 364 aa22.09■■□□□ 1.13
RPL13A-209ENST00000479992 GLI3P10071 1580 aa22.08■■□□□ 1.13
RPL13A-209ENST00000479992 CAMTA1Q9Y6Y1 1673 aa22.08■■□□□ 1.13
RPL13A-209ENST00000479992 RGS12O14924 1447 aa22.08■■□□□ 1.13
RPL13A-209ENST00000479992 COG3Q96JB2 828 aa22.08■■□□□ 1.13
RPL13A-209ENST00000479992 GJD4Q96KN9 370 aaPredicted RBP22.08■■□□□ 1.13
RPL13A-209ENST00000479992 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
RPL13A-209ENST00000479992 STRN4Q9NRL3 753 aa22.08■■□□□ 1.13
RPL13A-209ENST00000479992 CDK12Q9NYV4 1490 aaPredicted RBP22.08■■□□□ 1.12
RPL13A-209ENST00000479992 KIF20BQ96Q89 1820 aa22.08■■□□□ 1.12
RPL13A-209ENST00000479992 FYB1O15117 783 aa22.06■■□□□ 1.12
RPL13A-209ENST00000479992 ARHGEF25Q86VW2 580 aa22.06■■□□□ 1.12
RPL13A-209ENST00000479992 AATKQ6ZMQ8 1374 aa22.06■■□□□ 1.12
RPL13A-209ENST00000479992 PANK3Q9H999 370 aa22.05■■□□□ 1.12
RPL13A-209ENST00000479992 COL5A2P05997 1499 aaPredicted RBP22.04■■□□□ 1.12
RPL13A-209ENST00000479992 CCDC7Q96M83 1385 aa22.04■■□□□ 1.12
RPL13A-209ENST00000479992 WASHC2AQ641Q2 1341 aa22.04■■□□□ 1.12
RPL13A-209ENST00000479992 EVA1CP58658 441 aa22.03■■□□□ 1.12
RPL13A-209ENST00000479992 COL18A1P39060 1754 aa22.02■■□□□ 1.12
RPL13A-209ENST00000479992 CGNL1Q0VF96 1302 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms