RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SIRT1Q96EB6 747 aa21.62■■□□□ 1.05
USP11-207ENST00000478596 CAMTA1Q9Y6Y1 1673 aa21.62■■□□□ 1.05
USP11-207ENST00000478596 ADGRF5Q8IZF2 1346 aa21.61■■□□□ 1.05
USP11-207ENST00000478596 ITGAEP38570 1179 aa21.61■■□□□ 1.05
USP11-207ENST00000478596 TMEM132EQ6IEE7 984 aa21.58■■□□□ 1.05
USP11-207ENST00000478596 YTHDC2Q9H6S0 1430 aaKnown RBP21.57■■□□□ 1.04
USP11-207ENST00000478596 IFT172Q9UG01 1749 aa21.56■■□□□ 1.04
USP11-207ENST00000478596 RGPD8O14715 1765 aaPredicted RBP21.56■■□□□ 1.04
USP11-207ENST00000478596 PRDM11Q9NQV5 511 aa21.55■■□□□ 1.04
USP11-207ENST00000478596 TRPM3Q9HCF6 1732 aaPredicted RBP21.54■■□□□ 1.04
USP11-207ENST00000478596 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
USP11-207ENST00000478596 PDE3BQ13370 1112 aa21.53■■□□□ 1.04
USP11-207ENST00000478596 BARGINQ6ZT62 677 aa21.53■■□□□ 1.04
USP11-207ENST00000478596 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
USP11-207ENST00000478596 ALS2Q96Q42 1657 aa21.53■■□□□ 1.04
USP11-207ENST00000478596 ANKRD30BQ9BXX2 1392 aa21.52■■□□□ 1.04
USP11-207ENST00000478596 PIK3C2GO75747 1445 aa21.51■■□□□ 1.03
USP11-207ENST00000478596 GPRASP1Q5JY77 1395 aa21.5■■□□□ 1.03
USP11-207ENST00000478596 NRKQ7Z2Y5 1582 aa21.5■■□□□ 1.03
USP11-207ENST00000478596 CEP350Q5VT06 3117 aa21.49■■□□□ 1.03
USP11-207ENST00000478596 TRIM26Q12899 539 aaPredicted RBP21.48■■□□□ 1.03
USP11-207ENST00000478596 CRYBG1Q9Y4K1 1723 aa21.48■■□□□ 1.03
USP11-207ENST00000478596 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
USP11-207ENST00000478596 CASZ1Q86V15 1759 aa21.47■■□□□ 1.03
USP11-207ENST00000478596 PTGER2P43116 358 aa21.47■■□□□ 1.03
USP11-207ENST00000478596 KIAA0232Q92628 1395 aa21.47■■□□□ 1.03
USP11-207ENST00000478596 C11orf95C9JLR9 678 aaPredicted RBP21.46■■□□□ 1.03
USP11-207ENST00000478596 STRN4Q9NRL3 753 aa21.46■■□□□ 1.03
USP11-207ENST00000478596 SPATA31E1Q6ZUB1 1445 aa21.46■■□□□ 1.03
USP11-207ENST00000478596 PLSCR1O15162 318 aa21.44■■□□□ 1.02
USP11-207ENST00000478596 SYT17Q9BSW7 474 aa21.44■■□□□ 1.02
USP11-207ENST00000478596 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
USP11-207ENST00000478596 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
USP11-207ENST00000478596 CHRNA2Q15822 529 aa21.43■■□□□ 1.02
USP11-207ENST00000478596 PRAM1Q96QH2 718 aa21.43■■□□□ 1.02
USP11-207ENST00000478596 MYOM1P52179 1685 aa21.43■■□□□ 1.02
USP11-207ENST00000478596 RGPD3A6NKT7 1758 aaPredicted RBP21.42■■□□□ 1.02
USP11-207ENST00000478596 ZBTB7AO95365 584 aa21.42■■□□□ 1.02
USP11-207ENST00000478596 RGL3Q3MIN7 710 aa21.42■■□□□ 1.02
USP11-207ENST00000478596 SSH2Q76I76 1423 aa21.42■■□□□ 1.02
USP11-207ENST00000478596 RGPD4Q7Z3J3 1758 aa21.42■■□□□ 1.02
USP11-207ENST00000478596 SLC4A1APQ9BWU0 796 aaKnown RBP21.42■■□□□ 1.02
USP11-207ENST00000478596 PDGFDQ9GZP0 370 aaPredicted RBP21.42■■□□□ 1.02
USP11-207ENST00000478596 C14orf93Q9H972 538 aaKnown RBP21.42■■□□□ 1.02
USP11-207ENST00000478596 TCP11L2Q8N4U5 519 aa21.41■■□□□ 1.02
USP11-207ENST00000478596 FHDC1Q9C0D6 1143 aaPredicted RBP21.41■■□□□ 1.02
USP11-207ENST00000478596 DHX57Q6P158 1386 aaKnown RBP21.4■■□□□ 1.02
USP11-207ENST00000478596 GIGYF1O75420 1035 aaPredicted RBP21.4■■□□□ 1.02
USP11-207ENST00000478596 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
USP11-207ENST00000478596 CHD4Q14839 1912 aa21.38■■□□□ 1.01
USP11-207ENST00000478596 EVA1CP58658 441 aa21.38■■□□□ 1.01
USP11-207ENST00000478596 THRAP3Q9Y2W1 955 aaKnown RBP21.38■■□□□ 1.01
USP11-207ENST00000478596 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
USP11-207ENST00000478596 PAK3O75914 559 aaPredicted RBP21.37■■□□□ 1.01
USP11-207ENST00000478596 PRR36Q9H6K5 1346 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 DLC1Q96QB1 1528 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 LARP1Q6PKG0 1096 aaKnown RBP21.36■■□□□ 1.01
USP11-207ENST00000478596 ATF5Q9Y2D1 282 aaPredicted RBP21.36■■□□□ 1.01
USP11-207ENST00000478596 OVOS2A0A0G2JMS6 1433 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 OVOS2A0A0J9YW53 1432 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 OVOS2Q6IE36 1432 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 ZC3H6P61129 1189 aaKnown RBP21.35■■□□□ 1.01
USP11-207ENST00000478596 NGDNQ8NEJ9 315 aaKnown RBP21.35■■□□□ 1.01
USP11-207ENST00000478596 POGKQ9P215 609 aa21.35■■□□□ 1.01
USP11-207ENST00000478596 SGIP1Q9BQI5 828 aa21.34■■□□□ 1.01
USP11-207ENST00000478596 BCL11BQ9C0K0 894 aaPredicted RBP21.34■■□□□ 1.01
USP11-207ENST00000478596 TULP4Q9NRJ4 1543 aa21.34■■□□□ 1.01
USP11-207ENST00000478596 PROM2Q8N271 834 aa21.33■■□□□ 1.01
USP11-207ENST00000478596 MAP3K5Q99683 1374 aa21.33■■□□□ 1
USP11-207ENST00000478596 PHRF1Q9P1Y6 1649 aaKnown RBP21.33■■□□□ 1
USP11-207ENST00000478596 PEAK1Q9H792 1746 aa21.32■■□□□ 1
USP11-207ENST00000478596 CFAP70Q5T0N1 1121 aa21.32■■□□□ 1
USP11-207ENST00000478596 MTFR1LQ9H019 292 aa21.32■■□□□ 1
USP11-207ENST00000478596 PARP4Q9UKK3 1724 aaKnown RBP21.32■■□□□ 1
USP11-207ENST00000478596 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
USP11-207ENST00000478596 ATP7BP35670 1465 aa21.31■■□□□ 1
USP11-207ENST00000478596 CPDO75976 1380 aa21.29■■□□□ 1
USP11-207ENST00000478596 HIRIP3Q9BW71 556 aaPredicted RBP21.29■■□□□ 1
USP11-207ENST00000478596 STK32BQ9NY57 414 aa21.28■■□□□ 1
USP11-207ENST00000478596 WASLO00401 505 aaPredicted RBP21.27■■□□□ 1
USP11-207ENST00000478596 SLC15A2Q16348 729 aa21.27■■□□□ 1
USP11-207ENST00000478596 LMO7Q8WWI1 1683 aa21.27■■□□□ 1
USP11-207ENST00000478596 PTF1AQ7RTS3 328 aa21.26■□□□□ 0.99
USP11-207ENST00000478596 ARXQ96QS3 562 aa21.26■□□□□ 0.99
USP11-207ENST00000478596 BCL9O00512 1426 aa21.25■□□□□ 0.99
USP11-207ENST00000478596 MINK1Q8N4C8 1332 aaPredicted RBP21.24■□□□□ 0.99
USP11-207ENST00000478596 GPR162Q16538 588 aa21.23■□□□□ 0.99
USP11-207ENST00000478596 NUTM2GQ5VZR2 741 aa21.23■□□□□ 0.99
USP11-207ENST00000478596 COL5A2P05997 1499 aaPredicted RBP21.23■□□□□ 0.99
USP11-207ENST00000478596 SBF2Q86WG5 1849 aa21.22■□□□□ 0.99
USP11-207ENST00000478596 CRB1P82279 1406 aa21.22■□□□□ 0.99
USP11-207ENST00000478596 TXNRD1Q16881 649 aa21.22■□□□□ 0.99
USP11-207ENST00000478596 GOLGB1Q14789 3259 aaKnown RBP21.21■□□□□ 0.99
USP11-207ENST00000478596 DDB1Q16531 1140 aa21.21■□□□□ 0.99
USP11-207ENST00000478596 AATKQ6ZMQ8 1374 aa21.21■□□□□ 0.99
USP11-207ENST00000478596 LRRC37A3O60309 1634 aa21.2■□□□□ 0.98
USP11-207ENST00000478596 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
USP11-207ENST00000478596 SHANK3Q9BYB0 1731 aa21.19■□□□□ 0.98
USP11-207ENST00000478596 USP19O94966 1318 aa21.19■□□□□ 0.98
USP11-207ENST00000478596 TRAK1Q9UPV9 953 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms