RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 BMP1P13497 986 aa7.18□□□□□ -1.26
NPHP3-207ENST00000476742 ATP6V1AP38606 617 aa7.18□□□□□ -1.26
NPHP3-207ENST00000476742 KRTAP4-2Q9BYR5 136 aa7.18□□□□□ -1.26
NPHP3-207ENST00000476742 FUT2Q10981 343 aa7.17□□□□□ -1.26
NPHP3-207ENST00000476742 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
NPHP3-207ENST00000476742 GOLGA2P5Q9HBQ8 144 aa7.17□□□□□ -1.26
NPHP3-207ENST00000476742 SCARF2Q96GP6 870 aaPredicted RBP7.16□□□□□ -1.26
NPHP3-207ENST00000476742 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
NPHP3-207ENST00000476742 RSPH6AQ9H0K4 717 aa7.16□□□□□ -1.26
NPHP3-207ENST00000476742 FCF1Q9Y324 198 aaKnown RBP7.16□□□□□ -1.26
NPHP3-207ENST00000476742 ITGB2P05107 769 aa7.15□□□□□ -1.26
NPHP3-207ENST00000476742 ZNF385CQ66K41 422 aaPredicted RBP7.15□□□□□ -1.26
NPHP3-207ENST00000476742 SPIRE2Q8WWL2 714 aa7.15□□□□□ -1.26
NPHP3-207ENST00000476742 MRGPRX2Q96LB1 330 aa7.15□□□□□ -1.26
NPHP3-207ENST00000476742 TBC1D2Q9BYX2 928 aa7.15□□□□□ -1.26
NPHP3-207ENST00000476742 FAM117AQ9C073 453 aa7.15□□□□□ -1.26
NPHP3-207ENST00000476742 HOXA2O43364 376 aa7.14□□□□□ -1.27
NPHP3-207ENST00000476742 PUS10Q3MIT2 529 aaKnown RBP7.14□□□□□ -1.27
NPHP3-207ENST00000476742 GALNT6Q8NCL4 622 aa7.14□□□□□ -1.27
NPHP3-207ENST00000476742 MARSP56192 900 aaKnown RBP7.13□□□□□ -1.27
NPHP3-207ENST00000476742 MORN1Q5T089 497 aa7.13□□□□□ -1.27
NPHP3-207ENST00000476742 IL27Q8NEV9 243 aa7.13□□□□□ -1.27
NPHP3-207ENST00000476742 ARHGEF15O94989 841 aa7.12□□□□□ -1.27
NPHP3-207ENST00000476742 KRT76Q01546 638 aa7.12□□□□□ -1.27
NPHP3-207ENST00000476742 SVOPQ8N4V2 548 aa7.12□□□□□ -1.27
NPHP3-207ENST00000476742 MOXD2PA6NHM9 499 aa7.11□□□□□ -1.27
NPHP3-207ENST00000476742 FDX1P10109 184 aa7.11□□□□□ -1.27
NPHP3-207ENST00000476742 Q3C1V9 767 aa7.11□□□□□ -1.27
NPHP3-207ENST00000476742 SCUBE3Q8IX30 993 aa7.11□□□□□ -1.27
NPHP3-207ENST00000476742 SPSB2Q99619 263 aa7.11□□□□□ -1.27
NPHP3-207ENST00000476742 ATP1B4Q9UN42 357 aaPredicted RBP7.11□□□□□ -1.27
NPHP3-207ENST00000476742 GJA5P36382 358 aa7.1□□□□□ -1.27
NPHP3-207ENST00000476742 MYSM1Q5VVJ2 828 aa7.1□□□□□ -1.27
NPHP3-207ENST00000476742 RIC3Q7Z5B4 369 aa7.1□□□□□ -1.27
NPHP3-207ENST00000476742 SLC27A5Q9Y2P5 690 aa7.1□□□□□ -1.27
NPHP3-207ENST00000476742 PLEKHG3A1L390 1219 aa7.09□□□□□ -1.27
NPHP3-207ENST00000476742 SPTLC1O15269 473 aa7.09□□□□□ -1.27
NPHP3-207ENST00000476742 ZBTB24O43167 697 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-207ENST00000476742 FMNL1O95466 1100 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-207ENST00000476742 NDUFV2P19404 249 aa7.09□□□□□ -1.27
NPHP3-207ENST00000476742 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
NPHP3-207ENST00000476742 SH3D19Q5HYK7 790 aa7.09□□□□□ -1.27
NPHP3-207ENST00000476742 ZFP42Q96MM3 310 aa7.09□□□□□ -1.27
NPHP3-207ENST00000476742 CLK2P49760 499 aaKnown RBP7.08□□□□□ -1.28
NPHP3-207ENST00000476742 RSBN1LQ6PCB5 846 aaPredicted RBP7.08□□□□□ -1.28
NPHP3-207ENST00000476742 HLA-CQ95604 372 aa7.08□□□□□ -1.28
NPHP3-207ENST00000476742 SALL2Q9Y467 1007 aaPredicted RBP7.08□□□□□ -1.28
NPHP3-207ENST00000476742 CAPN5O15484 640 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-207ENST00000476742 GUCA2AQ02747 115 aa7.07□□□□□ -1.28
NPHP3-207ENST00000476742 DCAF5Q96JK2 942 aa7.07□□□□□ -1.28
NPHP3-207ENST00000476742 PCMTD1Q96MG8 357 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-207ENST00000476742 CNTNAP3BQ96NU0 1288 aa7.07□□□□□ -1.28
NPHP3-207ENST00000476742 CNTNAP3Q9BZ76 1288 aa7.07□□□□□ -1.28
NPHP3-207ENST00000476742 GOPCQ9HD26 462 aa7.07□□□□□ -1.28
NPHP3-207ENST00000476742 POLR3EQ9NVU0 708 aa7.07□□□□□ -1.28
NPHP3-207ENST00000476742 C6orf229H3BNL8 230 aa7.06□□□□□ -1.28
NPHP3-207ENST00000476742 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
NPHP3-207ENST00000476742 SPDYE5A6NIY4 337 aa7.05□□□□□ -1.28
NPHP3-207ENST00000476742 CSPP1Q1MSJ5 1256 aa7.05□□□□□ -1.28
NPHP3-207ENST00000476742 BRICD5Q6PL45 260 aa7.05□□□□□ -1.28
NPHP3-207ENST00000476742 THAP11Q96EK4 314 aa7.05□□□□□ -1.28
NPHP3-207ENST00000476742 PCDHGC3Q9UN70 934 aa7.05□□□□□ -1.28
NPHP3-207ENST00000476742 NUTM2BA6NNL0 878 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-207ENST00000476742 NUTM2EB1AL46 878 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-207ENST00000476742 MTMR2Q13614 643 aa7.04□□□□□ -1.28
NPHP3-207ENST00000476742 NUTM2DQ5VT03 806 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-207ENST00000476742 PRPF38BQ5VTL8 546 aaKnown RBP7.04□□□□□ -1.28
NPHP3-207ENST00000476742 RNF19BQ6ZMZ0 732 aa7.04□□□□□ -1.28
NPHP3-207ENST00000476742 NUTM2AQ8IVF1 878 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-207ENST00000476742 USB1Q9BQ65 265 aaKnown RBP7.04□□□□□ -1.28
NPHP3-207ENST00000476742 ZBTB3Q9H5J0 574 aa7.04□□□□□ -1.28
NPHP3-207ENST00000476742 LIMD1Q9UGP4 676 aa7.04□□□□□ -1.28
NPHP3-207ENST00000476742 PPFIA3O75145 1194 aa7.03□□□□□ -1.28
NPHP3-207ENST00000476742 SLURP2P0DP57 97 aa7.03□□□□□ -1.28
NPHP3-207ENST00000476742 RETREG3Q86VR2 466 aa7.03□□□□□ -1.28
NPHP3-207ENST00000476742 PCDHB15Q9Y5E8 787 aa7.03□□□□□ -1.28
NPHP3-207ENST00000476742 BAG6P46379 1132 aa7.02□□□□□ -1.29
NPHP3-207ENST00000476742 TRIM32Q13049 653 aa7.02□□□□□ -1.29
NPHP3-207ENST00000476742 TMEM132AQ24JP5 1023 aa7.02□□□□□ -1.29
NPHP3-207ENST00000476742 MSS51Q4VC12 460 aa7.02□□□□□ -1.29
NPHP3-207ENST00000476742 WHAMMQ8TF30 809 aa7.02□□□□□ -1.29
NPHP3-207ENST00000476742 SYMPKQ92797 1274 aaKnown RBP7.02□□□□□ -1.29
NPHP3-207ENST00000476742 HRCP23327 699 aa7.01□□□□□ -1.29
NPHP3-207ENST00000476742 PROCA1Q8NCQ7 364 aaPredicted RBP7.01□□□□□ -1.29
NPHP3-207ENST00000476742 LILRB3O75022 631 aa7□□□□□ -1.29
NPHP3-207ENST00000476742 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
NPHP3-207ENST00000476742 QPCTQ16769 361 aa6.99□□□□□ -1.29
NPHP3-207ENST00000476742 FAM160A2Q8N612 972 aaPredicted RBP6.99□□□□□ -1.29
NPHP3-207ENST00000476742 GPR161Q8N6U8 529 aaKnown RBP6.99□□□□□ -1.29
NPHP3-207ENST00000476742 PRR7Q8TB68 274 aa6.99□□□□□ -1.29
NPHP3-207ENST00000476742 CABLES1Q8TDN4 633 aa6.99□□□□□ -1.29
NPHP3-207ENST00000476742 SOBPA7XYQ1 873 aa6.98□□□□□ -1.29
NPHP3-207ENST00000476742 FURINP09958 794 aa6.98□□□□□ -1.29
NPHP3-207ENST00000476742 HELBQ8NG08 1087 aaPredicted RBP6.98□□□□□ -1.29
NPHP3-207ENST00000476742 TSC1Q92574 1164 aa6.98□□□□□ -1.29
NPHP3-207ENST00000476742 ALDH1A1P00352 501 aa6.97□□□□□ -1.29
NPHP3-207ENST00000476742 JUNDP17535 347 aa6.97□□□□□ -1.29
NPHP3-207ENST00000476742 PPP2R2DQ66LE6 453 aa6.97□□□□□ -1.29
NPHP3-207ENST00000476742 DESI1Q6ICB0 168 aa6.97□□□□□ -1.29
NPHP3-207ENST00000476742 DXOO77932 396 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms