RNA–Protein interactions for RNA: ENST00000472649.2

LINC02339-201, Transcript of long intergenic non-protein coding RNA 2339, humanhuman

TSL 1 (best) BASIC

Gene LINC02339, Length 752 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02339-201ENST00000472649 LINC01559Q495D7 138 aa10.09□□□□□ -0.79
LINC02339-201ENST00000472649 CAPN5O15484 640 aaPredicted RBP10.08□□□□□ -0.8
LINC02339-201ENST00000472649 SIAH2O43255 324 aa10.08□□□□□ -0.8
LINC02339-201ENST00000472649 VARSP26640 1264 aaKnown RBP10.08□□□□□ -0.8
LINC02339-201ENST00000472649 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
LINC02339-201ENST00000472649 PARP9Q8IXQ6 854 aa10.08□□□□□ -0.8
LINC02339-201ENST00000472649 BAP1Q92560 729 aa10.08□□□□□ -0.8
LINC02339-201ENST00000472649 ZBTB3Q9H5J0 574 aa10.08□□□□□ -0.8
LINC02339-201ENST00000472649 SNRPBP14678 240 aaKnown RBP10.07□□□□□ -0.8
LINC02339-201ENST00000472649 ZNF511Q8NB15 262 aa10.07□□□□□ -0.8
LINC02339-201ENST00000472649 SCRIBQ14160 1630 aa10.07□□□□□ -0.8
LINC02339-201ENST00000472649 TRIM66O15016 1216 aa10.06□□□□□ -0.8
LINC02339-201ENST00000472649 SPTLC1O15269 473 aa10.05□□□□□ -0.8
LINC02339-201ENST00000472649 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
LINC02339-201ENST00000472649 FAM181BA6NEQ2 426 aa10.04□□□□□ -0.8
LINC02339-201ENST00000472649 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
LINC02339-201ENST00000472649 LYPD8Q6UX82 237 aa10.04□□□□□ -0.8
LINC02339-201ENST00000472649 FAM174AQ8TBP5 190 aa10.04□□□□□ -0.8
LINC02339-201ENST00000472649 SLC16A10Q8TF71 515 aa10.04□□□□□ -0.8
LINC02339-201ENST00000472649 RIC3Q7Z5B4 369 aa10.03□□□□□ -0.8
LINC02339-201ENST00000472649 TLL2Q9Y6L7 1015 aa10.03□□□□□ -0.8
LINC02339-201ENST00000472649 LCE2CQ5TA81 110 aa10.02□□□□□ -0.81
LINC02339-201ENST00000472649 MPNDQ8N594 471 aa10.02□□□□□ -0.81
LINC02339-201ENST00000472649 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
LINC02339-201ENST00000472649 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
LINC02339-201ENST00000472649 HRCP23327 699 aa10.01□□□□□ -0.81
LINC02339-201ENST00000472649 AGERQ15109 404 aa10.01□□□□□ -0.81
LINC02339-201ENST00000472649 CSPP1Q1MSJ5 1256 aa10.01□□□□□ -0.81
LINC02339-201ENST00000472649 NUTM2DQ5VT03 806 aaPredicted RBP10.01□□□□□ -0.81
LINC02339-201ENST00000472649 NUTM2AQ8IVF1 878 aaPredicted RBP10.01□□□□□ -0.81
LINC02339-201ENST00000472649 BMP1P13497 986 aa10□□□□□ -0.81
LINC02339-201ENST00000472649 NNTQ13423 1086 aa10□□□□□ -0.81
LINC02339-201ENST00000472649 TSC1Q92574 1164 aa10□□□□□ -0.81
LINC02339-201ENST00000472649 PCDHB15Q9Y5E8 787 aa10□□□□□ -0.81
LINC02339-201ENST00000472649 RB1CC1Q8TDY2 1594 aa10□□□□□ -0.81
LINC02339-201ENST00000472649 CFAP99D6REC4 459 aa9.99□□□□□ -0.81
LINC02339-201ENST00000472649 SCARF1Q14162 830 aa9.99□□□□□ -0.81
LINC02339-201ENST00000472649 ARMC2Q8NEN0 867 aa9.99□□□□□ -0.81
LINC02339-201ENST00000472649 ADH1CP00326 375 aa9.98□□□□□ -0.81
LINC02339-201ENST00000472649 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
LINC02339-201ENST00000472649 PDE4DQ08499 809 aa9.97□□□□□ -0.81
LINC02339-201ENST00000472649 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
LINC02339-201ENST00000472649 BPHLQ86WA6 291 aaPredicted RBP9.97□□□□□ -0.81
LINC02339-201ENST00000472649 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
LINC02339-201ENST00000472649 WDR4P57081 412 aaKnown RBP9.96□□□□□ -0.82
LINC02339-201ENST00000472649 ARID5BQ14865 1188 aa9.96□□□□□ -0.82
LINC02339-201ENST00000472649 NPAS3Q8IXF0 933 aa9.96□□□□□ -0.82
LINC02339-201ENST00000472649 CABLES1Q8TDN4 633 aa9.96□□□□□ -0.82
LINC02339-201ENST00000472649 MAP10Q9P2G4 905 aa9.96□□□□□ -0.82
LINC02339-201ENST00000472649 F12P00748 615 aaPredicted RBP9.95□□□□□ -0.82
LINC02339-201ENST00000472649 TUSC1Q2TAM9 212 aa9.95□□□□□ -0.82
LINC02339-201ENST00000472649 SUZ12Q15022 739 aaKnown RBP9.94□□□□□ -0.82
LINC02339-201ENST00000472649 NBPF14Q5TI25 921 aa9.94□□□□□ -0.82
LINC02339-201ENST00000472649 MYSM1Q5VVJ2 828 aa9.94□□□□□ -0.82
LINC02339-201ENST00000472649 MRPL14Q6P1L8 145 aaKnown RBP9.94□□□□□ -0.82
LINC02339-201ENST00000472649 RSPH6AQ9H0K4 717 aa9.94□□□□□ -0.82
LINC02339-201ENST00000472649 IRF7Q92985 503 aa9.93□□□□□ -0.82
LINC02339-201ENST00000472649 ZFP42Q96MM3 310 aa9.93□□□□□ -0.82
LINC02339-201ENST00000472649 NR5A1Q13285 461 aa9.92□□□□□ -0.82
LINC02339-201ENST00000472649 FOXJ1Q92949 421 aa9.92□□□□□ -0.82
LINC02339-201ENST00000472649 CDK15Q96Q40 435 aa9.92□□□□□ -0.82
LINC02339-201ENST00000472649 UPP2O95045 317 aa9.91□□□□□ -0.82
LINC02339-201ENST00000472649 TIMP2P16035 220 aa9.91□□□□□ -0.82
LINC02339-201ENST00000472649 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.82
LINC02339-201ENST00000472649 CLK2P49760 499 aaKnown RBP9.9□□□□□ -0.82
LINC02339-201ENST00000472649 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
LINC02339-201ENST00000472649 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
LINC02339-201ENST00000472649 LILRB3O75022 631 aa9.89□□□□□ -0.83
LINC02339-201ENST00000472649 QPCTQ16769 361 aa9.89□□□□□ -0.83
LINC02339-201ENST00000472649 PURBQ96QR8 312 aaKnown RBP9.89□□□□□ -0.83
LINC02339-201ENST00000472649 PER1O15534 1290 aaPredicted RBP9.88□□□□□ -0.83
LINC02339-201ENST00000472649 ZIC2O95409 532 aaPredicted RBP9.88□□□□□ -0.83
LINC02339-201ENST00000472649 ZSCAN1Q8NBB4 408 aa9.88□□□□□ -0.83
LINC02339-201ENST00000472649 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
LINC02339-201ENST00000472649 GPKOWQ92917 476 aaPredicted RBP eCLIP9.87□□□□□ -0.83
LINC02339-201ENST00000472649 ATP1B4Q9UN42 357 aaPredicted RBP9.86□□□□□ -0.83
LINC02339-201ENST00000472649 H3BM21 787 aa9.85□□□□□ -0.83
LINC02339-201ENST00000472649 MAN1A2O60476 641 aa9.85□□□□□ -0.83
LINC02339-201ENST00000472649 VASH1Q7L8A9 365 aaPredicted RBP9.85□□□□□ -0.83
LINC02339-201ENST00000472649 MAGEB6P1A0A0J9YX57 407 aa9.84□□□□□ -0.83
LINC02339-201ENST00000472649 MAP4K5Q9Y4K4 846 aa9.84□□□□□ -0.83
LINC02339-201ENST00000472649 BMP2P12643 396 aa9.83□□□□□ -0.84
LINC02339-201ENST00000472649 FSHRP23945 695 aa9.83□□□□□ -0.84
LINC02339-201ENST00000472649 GMPRP36959 345 aa9.83□□□□□ -0.84
LINC02339-201ENST00000472649 VEGFBP49765 207 aa9.83□□□□□ -0.84
LINC02339-201ENST00000472649 C6orf118Q5T5N4 469 aa9.83□□□□□ -0.84
LINC02339-201ENST00000472649 ITPKCQ96DU7 683 aa9.83□□□□□ -0.84
LINC02339-201ENST00000472649 KLF16Q9BXK1 252 aaPredicted RBP9.83□□□□□ -0.84
LINC02339-201ENST00000472649 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
LINC02339-201ENST00000472649 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
LINC02339-201ENST00000472649 C4orf48Q5BLP8 95 aa9.82□□□□□ -0.84
LINC02339-201ENST00000472649 RTL5Q5HYW3 569 aaPredicted RBP9.82□□□□□ -0.84
LINC02339-201ENST00000472649 EMILIN1Q9Y6C2 1016 aa9.82□□□□□ -0.84
LINC02339-201ENST00000472649 CECR2Q9BXF3 1484 aa9.81□□□□□ -0.84
LINC02339-201ENST00000472649 NR3C2P08235 984 aa9.81□□□□□ -0.84
LINC02339-201ENST00000472649 GRM5P41594 1212 aa9.81□□□□□ -0.84
LINC02339-201ENST00000472649 TRMT44Q8IYL2 757 aaKnown RBP9.81□□□□□ -0.84
LINC02339-201ENST00000472649 C1QTNF2Q9BXJ5 285 aa9.81□□□□□ -0.84
LINC02339-201ENST00000472649 CARD14Q9BXL6 1004 aa9.81□□□□□ -0.84
LINC02339-201ENST00000472649 SH3BP5LQ7L8J4 393 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms