RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	SMC5	Q8IY18	1101 aa		4.27	□□□□□ -1.73
TTC3-214	ENST00000472398	ZDHHC16	Q969W1	377 aa		4.27	□□□□□ -1.73
TTC3-214	ENST00000472398	C8orf37	Q96NL8	207 aa		4.27	□□□□□ -1.73
TTC3-214	ENST00000472398	SPOCK3	Q9BQ16	436 aa		4.27	□□□□□ -1.73
TTC3-214	ENST00000472398	UBA5	Q9GZZ9	404 aa		4.27	□□□□□ -1.73
TTC3-214	ENST00000472398	SBNO2	Q9Y2G9	1366 aa		4.27	□□□□□ -1.73
TTC3-214	ENST00000472398	EPB41L2	O43491	1005 aa	Known RBP	4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	POLD1	P28340	1107 aa		4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	TSR1	Q2NL82	804 aa	Known RBP	4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	LARGE2	Q8N3Y3	721 aa		4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	SH3BP5	O60239	455 aa		4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	NUDT7	P0C024	238 aa		4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	ZNF16	P17020	682 aa	Predicted RBP	4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	ARMCX6	Q7L4S7	300 aa		4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	KRI1	Q8N9T8	703 aa	Known RBP	4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	KHSRP	Q92945	711 aa	Known RBP eCLIP	4.26	□□□□□ -1.73	1e-6	■■□□□ 12
TTC3-214	ENST00000472398	CCDC102A	Q96A19	550 aa		4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	CDHR5	Q9HBB8	845 aa		4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	FAN1	Q9Y2M0	1017 aa		4.26	□□□□□ -1.73
TTC3-214	ENST00000472398	MAP3K7	O43318	606 aa		4.25	□□□□□ -1.73
TTC3-214	ENST00000472398	FECH	P22830	423 aa		4.25	□□□□□ -1.73
TTC3-214	ENST00000472398	BDNF	P23560	247 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	C6orf132	Q5T0Z8	1188 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	ZNF710	Q8N1W2	664 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	TMUB1	Q9BVT8	246 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	BCL2L12	Q9HB09	334 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	HDAC5	Q9UQL6	1122 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	ERBB3	P21860	1342 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	TTC36	A6NLP5	189 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	CNGB1	Q14028	1251 aa	Predicted RBP	4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	NAALADL2	Q58DX5	795 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	CCDC181	Q5TID7	509 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	GET4	Q7L5D6	327 aa	Predicted RBP	4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	NBPF11	Q86T75	865 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	ZNF454	Q8N9F8	522 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	ADAM33	Q9BZ11	813 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	LHX6	Q9UPM6	363 aa		4.24	□□□□□ -1.73
TTC3-214	ENST00000472398	EXOC5	O00471	708 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	NBPF1	Q3BBV0	1214 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	PPP4R3B	Q5MIZ7	849 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	C11orf96	Q7Z7L8	435 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	CACTIN-AS1	Q8N1I8	211 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	MPND	Q8N594	471 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	ATL2	Q8NHH9	583 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	METTL14	Q9HCE5	456 aa	Known RBP	4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	DHX16	O60231	1041 aa	Known RBP	4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	ZC3H6	P61129	1189 aa	Known RBP	4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	C4orf46	Q504U0	113 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	ZNF280D	Q6N043	979 aa		4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	RBM33	Q96EV2	1170 aa	Known RBP	4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	ZNF830	Q96NB3	372 aa	Predicted RBP	4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	GNL3L	Q9NVN8	582 aa	Known RBP	4.23	□□□□□ -1.73
TTC3-214	ENST00000472398	PPP1R15A	O75807	674 aa	Predicted RBP	4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	SEMA3F	Q13275	785 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	RTL5	Q5HYW3	569 aa	Predicted RBP	4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	ZNF787	Q6DD87	383 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	NLGN1	Q8N2Q7	840 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	TSPAN18	Q96SJ8	248 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	CHPF2	Q9P2E5	772 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	RPGRIP1L	Q68CZ1	1315 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	ZNF500	O60304	480 aa	Predicted RBP	4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	ARID4A	P29374	1257 aa	Predicted RBP	4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	GYS2	P54840	703 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	EVA1C	P58658	441 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	TRAF7	Q6Q0C0	670 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	SPACA7	Q96KW9	195 aa		4.22	□□□□□ -1.73
TTC3-214	ENST00000472398	PPP1R3G	B7ZBB8	358 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	PPP4C	P60510	307 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	EGFLAM	Q63HQ2	1017 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	PARP9	Q8IXQ6	854 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	NRBP1	Q9UHY1	535 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	ADGRG1	Q9Y653	693 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	CFAP69	A5D8W1	941 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	GOLGA6C	A6NDK9	693 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	GOLGA6B	A6NDN3	693 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	OAT	P04181	439 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	GOLGA6D	P0CG33	693 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	PRSS12	P56730	875 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	CREBRF	Q8IUR6	639 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	EGFL6	Q8IUX8	553 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	CXorf38	Q8TB03	319 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	DDRGK1	Q96HY6	314 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	ARHGEF10L	Q9HCE6	1279 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	GOLGA6A	Q9NYA3	693 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	COG6	Q9Y2V7	657 aa		4.21	□□□□□ -1.74
TTC3-214	ENST00000472398	CCDC189	A1A4V9	331 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	SCP2	P22307	547 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	PDE6B	P35913	854 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	CASC1	Q6TDU7	716 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	DDX46	Q7L014	1031 aa	Known RBP	4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	PXYLP1	Q8TE99	480 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	LNPK	Q9C0E8	428 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	COL9A1	P20849	921 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	NBPF20	Q3BBV1	942 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	ZKSCAN2	Q63HK3	967 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	PADI6	Q6TGC4	694 aa		4.2	□□□□□ -1.74
TTC3-214	ENST00000472398	METTL3	Q86U44	580 aa	Known RBP	4.2	□□□□□ -1.74

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