RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SPATA31A6Q5VVP1 1343 aa17.08■□□□□ 0.32
PRKCB-205ENST00000472066 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
PRKCB-205ENST00000472066 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
PRKCB-205ENST00000472066 ANKRD36BQ8N2N9 1353 aa17.07■□□□□ 0.32
PRKCB-205ENST00000472066 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
PRKCB-205ENST00000472066 ABTB2Q8N961 1025 aa17.06■□□□□ 0.32
PRKCB-205ENST00000472066 CCDC7Q96M83 1385 aa17.05■□□□□ 0.32
PRKCB-205ENST00000472066 TRPM3Q9HCF6 1732 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-205ENST00000472066 NUTM2BA6NNL0 878 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-205ENST00000472066 NUTM2EB1AL46 878 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-205ENST00000472066 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
PRKCB-205ENST00000472066 NUTM2AQ8IVF1 878 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-205ENST00000472066 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
PRKCB-205ENST00000472066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRKCB-205ENST00000472066 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
PRKCB-205ENST00000472066 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
PRKCB-205ENST00000472066 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
PRKCB-205ENST00000472066 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
PRKCB-205ENST00000472066 PANK3Q9H999 370 aa17.03■□□□□ 0.32
PRKCB-205ENST00000472066 SHPRHQ149N8 1683 aa17.03■□□□□ 0.32
PRKCB-205ENST00000472066 NLRP6P59044 892 aa17.02■□□□□ 0.32
PRKCB-205ENST00000472066 NLRP13Q86W25 1043 aa17.02■□□□□ 0.32
PRKCB-205ENST00000472066 AKAP12Q02952 1782 aa17.01■□□□□ 0.31
PRKCB-205ENST00000472066 ALS2Q96Q42 1657 aa17.01■□□□□ 0.31
PRKCB-205ENST00000472066 COL22A1Q8NFW1 1626 aaPredicted RBP17■□□□□ 0.31
PRKCB-205ENST00000472066 NME9Q86XW9 330 aa17■□□□□ 0.31
PRKCB-205ENST00000472066 MYOM1P52179 1685 aa17■□□□□ 0.31
PRKCB-205ENST00000472066 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
PRKCB-205ENST00000472066 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
PRKCB-205ENST00000472066 ADAMTS2O95450 1211 aa16.98■□□□□ 0.31
PRKCB-205ENST00000472066 LRP6O75581 1613 aa16.98■□□□□ 0.31
PRKCB-205ENST00000472066 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
PRKCB-205ENST00000472066 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
PRKCB-205ENST00000472066 USP19O94966 1318 aa16.97■□□□□ 0.31
PRKCB-205ENST00000472066 FYB1O15117 783 aa16.97■□□□□ 0.31
PRKCB-205ENST00000472066 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
PRKCB-205ENST00000472066 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
PRKCB-205ENST00000472066 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.31
PRKCB-205ENST00000472066 GCP02774 474 aa16.96■□□□□ 0.31
PRKCB-205ENST00000472066 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
PRKCB-205ENST00000472066 COG3Q96JB2 828 aa16.94■□□□□ 0.3
PRKCB-205ENST00000472066 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
PRKCB-205ENST00000472066 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
PRKCB-205ENST00000472066 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
PRKCB-205ENST00000472066 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
PRKCB-205ENST00000472066 KCNH5Q8NCM2 988 aa16.93■□□□□ 0.3
PRKCB-205ENST00000472066 C8orf37Q96NL8 207 aa16.93■□□□□ 0.3
PRKCB-205ENST00000472066 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
PRKCB-205ENST00000472066 FAM83GA6ND36 823 aa16.92■□□□□ 0.3
PRKCB-205ENST00000472066 ZC3H6P61129 1189 aaKnown RBP16.92■□□□□ 0.3
PRKCB-205ENST00000472066 NGLY1Q96IV0 654 aa16.92■□□□□ 0.3
PRKCB-205ENST00000472066 OVOS2A0A0J9YW53 1432 aa16.91■□□□□ 0.3
PRKCB-205ENST00000472066 OVOS2Q6IE36 1432 aa16.91■□□□□ 0.3
PRKCB-205ENST00000472066 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-205ENST00000472066 SLIT3O75094 1523 aa16.91■□□□□ 0.3
PRKCB-205ENST00000472066 SOX12O15370 315 aa16.9■□□□□ 0.3
PRKCB-205ENST00000472066 KIAA0232Q92628 1395 aa16.89■□□□□ 0.3
PRKCB-205ENST00000472066 FNBP4Q8N3X1 1017 aaPredicted RBP16.89■□□□□ 0.29
PRKCB-205ENST00000472066 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
PRKCB-205ENST00000472066 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
PRKCB-205ENST00000472066 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
PRKCB-205ENST00000472066 PRDM11Q9NQV5 511 aa16.88■□□□□ 0.29
PRKCB-205ENST00000472066 AFF2P51816 1311 aa16.88■□□□□ 0.29
PRKCB-205ENST00000472066 CPDO75976 1380 aa16.88■□□□□ 0.29
PRKCB-205ENST00000472066 DDX10Q13206 875 aaKnown RBP16.87■□□□□ 0.29
PRKCB-205ENST00000472066 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
PRKCB-205ENST00000472066 ARHGEF25Q86VW2 580 aa16.87■□□□□ 0.29
PRKCB-205ENST00000472066 RGS17Q9UGC6 210 aaPredicted RBP16.87■□□□□ 0.29
PRKCB-205ENST00000472066 PHRF1Q9P1Y6 1649 aaKnown RBP16.87■□□□□ 0.29
PRKCB-205ENST00000472066 ABCA3Q99758 1704 aa16.87■□□□□ 0.29
PRKCB-205ENST00000472066 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
PRKCB-205ENST00000472066 FBLN1P23142 703 aa16.85■□□□□ 0.29
PRKCB-205ENST00000472066 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
PRKCB-205ENST00000472066 USP21Q9UK80 565 aa16.85■□□□□ 0.29
PRKCB-205ENST00000472066 NSD2O96028 1365 aa16.85■□□□□ 0.29
PRKCB-205ENST00000472066 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
PRKCB-205ENST00000472066 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
PRKCB-205ENST00000472066 ZNF772Q68DY9 489 aaPredicted RBP16.84■□□□□ 0.29
PRKCB-205ENST00000472066 SLIT2O94813 1529 aa16.84■□□□□ 0.29
PRKCB-205ENST00000472066 NFAT5O94916 1531 aa16.84■□□□□ 0.29
PRKCB-205ENST00000472066 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
PRKCB-205ENST00000472066 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
PRKCB-205ENST00000472066 MORC1Q86VD1 984 aa16.83■□□□□ 0.28
PRKCB-205ENST00000472066 UNC5CLQ8IV45 518 aa16.83■□□□□ 0.28
PRKCB-205ENST00000472066 BCL9LQ86UU0 1499 aa16.82■□□□□ 0.28
PRKCB-205ENST00000472066 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
PRKCB-205ENST00000472066 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
PRKCB-205ENST00000472066 MAP3K19Q56UN5 1328 aa16.81■□□□□ 0.28
PRKCB-205ENST00000472066 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
PRKCB-205ENST00000472066 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
PRKCB-205ENST00000472066 QTRT2Q9H974 415 aaKnown RBP16.81■□□□□ 0.28
PRKCB-205ENST00000472066 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-205ENST00000472066 POTEAQ6S8J7 498 aa16.8■□□□□ 0.28
PRKCB-205ENST00000472066 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
PRKCB-205ENST00000472066 COL14A1Q05707 1796 aaKnown RBP16.79■□□□□ 0.28
PRKCB-205ENST00000472066 EVA1CP58658 441 aa16.79■□□□□ 0.28
PRKCB-205ENST00000472066 IP6K1Q92551 441 aa16.79■□□□□ 0.28
PRKCB-205ENST00000472066 TRPC5Q9UL62 973 aaPredicted RBP16.79■□□□□ 0.28
PRKCB-205ENST00000472066 AMPHP49418 695 aa16.78■□□□□ 0.28
PRKCB-205ENST00000472066 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms