RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 ARHGEF10O15013 1369 aa25.03■■□□□ 1.6
LMNA-211ENST00000470199 USP6P35125 1406 aa25.03■■□□□ 1.6
LMNA-211ENST00000470199 CD163L1Q9NR16 1453 aa25.02■■□□□ 1.6
LMNA-211ENST00000470199 CPSF1Q10570 1443 aaKnown RBP25.02■■□□□ 1.6
LMNA-211ENST00000470199 SLC24A1O60721 1099 aa25■■□□□ 1.59
LMNA-211ENST00000470199 C8orf37Q96NL8 207 aa25■■□□□ 1.59
LMNA-211ENST00000470199 SSH2Q76I76 1423 aa25■■□□□ 1.59
LMNA-211ENST00000470199 AKAP12Q02952 1782 aa24.98■■□□□ 1.59
LMNA-211ENST00000470199 KTN1Q86UP2 1357 aaKnown RBP24.97■■□□□ 1.59
LMNA-211ENST00000470199 ABTB2Q8N961 1025 aa24.97■■□□□ 1.59
LMNA-211ENST00000470199 ZNF692Q9BU19 519 aaPredicted RBP24.97■■□□□ 1.59
LMNA-211ENST00000470199 TTC21BQ7Z4L5 1316 aa24.96■■□□□ 1.59
LMNA-211ENST00000470199 C11orf95C9JLR9 678 aaPredicted RBP24.96■■□□□ 1.59
LMNA-211ENST00000470199 POTEAQ6S8J7 498 aa24.96■■□□□ 1.59
LMNA-211ENST00000470199 ABCA3Q99758 1704 aa24.95■■□□□ 1.59
LMNA-211ENST00000470199 AFF2P51816 1311 aa24.95■■□□□ 1.58
LMNA-211ENST00000470199 HAP1P54257 671 aaPredicted RBP24.95■■□□□ 1.58
LMNA-211ENST00000470199 ILDR2Q71H61 639 aa24.95■■□□□ 1.58
LMNA-211ENST00000470199 A0A1W2PP64 1363 aa24.94■■□□□ 1.58
LMNA-211ENST00000470199 NGLY1Q96IV0 654 aa24.94■■□□□ 1.58
LMNA-211ENST00000470199 CRYBG1Q9Y4K1 1723 aa24.92■■□□□ 1.58
LMNA-211ENST00000470199 HDGFL2Q7Z4V5 671 aaPredicted RBP24.92■■□□□ 1.58
LMNA-211ENST00000470199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.92■■□□□ 1.58
LMNA-211ENST00000470199 POLR3GLQ9BT43 218 aa24.92■■□□□ 1.58
LMNA-211ENST00000470199 NRKQ7Z2Y5 1582 aa24.92■■□□□ 1.58
LMNA-211ENST00000470199 MON2Q7Z3U7 1717 aa24.92■■□□□ 1.58
LMNA-211ENST00000470199 BRD4O60885 1362 aaPredicted RBP24.92■■□□□ 1.58
LMNA-211ENST00000470199 CDCA8Q53HL2 280 aa24.91■■□□□ 1.58
LMNA-211ENST00000470199 TERF2IPQ9NYB0 399 aa24.91■■□□□ 1.58
LMNA-211ENST00000470199 ZRANB1Q9UGI0 708 aa24.91■■□□□ 1.58
LMNA-211ENST00000470199 PIK3C2AO00443 1686 aa24.9■■□□□ 1.58
LMNA-211ENST00000470199 NLRP6P59044 892 aa24.89■■□□□ 1.58
LMNA-211ENST00000470199 NINLQ9Y2I6 1382 aa24.89■■□□□ 1.57
LMNA-211ENST00000470199 FAM83GA6ND36 823 aa24.88■■□□□ 1.57
LMNA-211ENST00000470199 NME9Q86XW9 330 aa24.88■■□□□ 1.57
LMNA-211ENST00000470199 MARF1Q9Y4F3 1742 aaKnown RBP24.88■■□□□ 1.57
LMNA-211ENST00000470199 USP19O94966 1318 aa24.87■■□□□ 1.57
LMNA-211ENST00000470199 NLRP13Q86W25 1043 aa24.87■■□□□ 1.57
LMNA-211ENST00000470199 FNBP4Q8N3X1 1017 aaPredicted RBP24.87■■□□□ 1.57
LMNA-211ENST00000470199 MYOM1P52179 1685 aa24.87■■□□□ 1.57
LMNA-211ENST00000470199 TTC21AQ8NDW8 1320 aa24.86■■□□□ 1.57
LMNA-211ENST00000470199 PHRF1Q9P1Y6 1649 aaKnown RBP24.86■■□□□ 1.57
LMNA-211ENST00000470199 ANKRD36BQ8N2N9 1353 aa24.86■■□□□ 1.57
LMNA-211ENST00000470199 ZC3H6P61129 1189 aaKnown RBP24.85■■□□□ 1.57
LMNA-211ENST00000470199 ZNF772Q68DY9 489 aaPredicted RBP24.85■■□□□ 1.57
LMNA-211ENST00000470199 USP21Q9UK80 565 aa24.85■■□□□ 1.57
LMNA-211ENST00000470199 EDC4Q6P2E9 1401 aaKnown RBP24.85■■□□□ 1.57
LMNA-211ENST00000470199 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.57
LMNA-211ENST00000470199 GCP02774 474 aa24.83■■□□□ 1.57
LMNA-211ENST00000470199 KIAA0232Q92628 1395 aa24.82■■□□□ 1.56
LMNA-211ENST00000470199 CHRNA2Q15822 529 aa24.82■■□□□ 1.56
LMNA-211ENST00000470199 CARD14Q9BXL6 1004 aa24.82■■□□□ 1.56
LMNA-211ENST00000470199 SLIT2O94813 1529 aa24.81■■□□□ 1.56
LMNA-211ENST00000470199 QTRT2Q9H974 415 aaKnown RBP24.81■■□□□ 1.56
LMNA-211ENST00000470199 SOX12O15370 315 aa24.8■■□□□ 1.56
LMNA-211ENST00000470199 SLIT3O75094 1523 aa24.8■■□□□ 1.56
LMNA-211ENST00000470199 KIF7Q2M1P5 1343 aa24.8■■□□□ 1.56
LMNA-211ENST00000470199 PRDM11Q9NQV5 511 aa24.79■■□□□ 1.56
LMNA-211ENST00000470199 USP31Q70CQ4 1352 aa24.79■■□□□ 1.56
LMNA-211ENST00000470199 PLCH1Q4KWH8 1693 aa24.78■■□□□ 1.56
LMNA-211ENST00000470199 BTG4Q9NY30 223 aa24.77■■□□□ 1.56
LMNA-211ENST00000470199 ZBTB7CA1YPR0 619 aa24.76■■□□□ 1.55
LMNA-211ENST00000470199 UNC5CLQ8IV45 518 aa24.76■■□□□ 1.55
LMNA-211ENST00000470199 ATRNO75882 1429 aa24.76■■□□□ 1.55
LMNA-211ENST00000470199 COL14A1Q05707 1796 aaKnown RBP24.75■■□□□ 1.55
LMNA-211ENST00000470199 CPDO75976 1380 aa24.74■■□□□ 1.55
LMNA-211ENST00000470199 NSD3Q9BZ95 1437 aa24.74■■□□□ 1.55
LMNA-211ENST00000470199 OVOS2A0A0J9YW53 1432 aa24.73■■□□□ 1.55
LMNA-211ENST00000470199 OVOS2Q6IE36 1432 aa24.73■■□□□ 1.55
LMNA-211ENST00000470199 FYB1O15117 783 aa24.73■■□□□ 1.55
LMNA-211ENST00000470199 RXRBP28702 533 aa24.73■■□□□ 1.55
LMNA-211ENST00000470199 GGNBP2Q9H3C7 697 aa24.73■■□□□ 1.55
LMNA-211ENST00000470199 PANK3Q9H999 370 aa24.73■■□□□ 1.55
LMNA-211ENST00000470199 TRPC5Q9UL62 973 aaPredicted RBP24.73■■□□□ 1.55
LMNA-211ENST00000470199 NFAT5O94916 1531 aa24.71■■□□□ 1.55
LMNA-211ENST00000470199 WASHC2AQ641Q2 1341 aa24.71■■□□□ 1.55
LMNA-211ENST00000470199 USP54Q70EL1 1684 aa24.71■■□□□ 1.55
LMNA-211ENST00000470199 NRAPQ86VF7 1730 aa24.7■■□□□ 1.54
LMNA-211ENST00000470199 FBLN1P23142 703 aa24.7■■□□□ 1.54
LMNA-211ENST00000470199 KCNH5Q8NCM2 988 aa24.7■■□□□ 1.54
LMNA-211ENST00000470199 NWD2Q9ULI1 1742 aa24.69■■□□□ 1.54
LMNA-211ENST00000470199 CCDC7Q96M83 1385 aa24.69■■□□□ 1.54
LMNA-211ENST00000470199 CAMTA1Q9Y6Y1 1673 aa24.69■■□□□ 1.54
LMNA-211ENST00000470199 RBM6P78332 1123 aaKnown RBP24.69■■□□□ 1.54
LMNA-211ENST00000470199 ARHGEF25Q86VW2 580 aa24.69■■□□□ 1.54
LMNA-211ENST00000470199 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.69■■□□□ 1.54
LMNA-211ENST00000470199 COG3Q96JB2 828 aa24.68■■□□□ 1.54
LMNA-211ENST00000470199 LMO7Q8WWI1 1683 aa24.67■■□□□ 1.54
LMNA-211ENST00000470199 VPS72Q15906 364 aa24.67■■□□□ 1.54
LMNA-211ENST00000470199 GJD4Q96KN9 370 aaPredicted RBP24.67■■□□□ 1.54
LMNA-211ENST00000470199 STRN4Q9NRL3 753 aa24.67■■□□□ 1.54
LMNA-211ENST00000470199 AXIN2Q9Y2T1 843 aa24.67■■□□□ 1.54
LMNA-211ENST00000470199 GLI3P10071 1580 aa24.65■■□□□ 1.54
LMNA-211ENST00000470199 CCDC9Q9Y3X0 531 aaKnown RBP24.65■■□□□ 1.54
LMNA-211ENST00000470199 AATKQ6ZMQ8 1374 aa24.65■■□□□ 1.54
LMNA-211ENST00000470199 COL18A1P39060 1754 aa24.64■■□□□ 1.53
LMNA-211ENST00000470199 RGS12O14924 1447 aa24.63■■□□□ 1.53
LMNA-211ENST00000470199 KIF20BQ96Q89 1820 aa24.62■■□□□ 1.53
LMNA-211ENST00000470199 ZEB1P37275 1124 aaPredicted RBP24.61■■□□□ 1.53
LMNA-211ENST00000470199 EVA1CP58658 441 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms