RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 ABCA3Q99758 1704 aa37.92■■■■□ 3.66
SNX5-206ENST00000469704 UNC5CLQ8IV45 518 aa37.92■■■■□ 3.66
SNX5-206ENST00000469704 PPIP5K1Q6PFW1 1433 aa37.91■■■■□ 3.66
SNX5-206ENST00000469704 PLEKHG5O94827 1062 aa37.9■■■■□ 3.66
SNX5-206ENST00000469704 RALGAPBQ86X10 1494 aa37.9■■■■□ 3.66
SNX5-206ENST00000469704 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.9■■■■□ 3.66
SNX5-206ENST00000469704 RGS12O14924 1447 aa37.86■■■■□ 3.65
SNX5-206ENST00000469704 BRD4O60885 1362 aaPredicted RBP37.85■■■■□ 3.65
SNX5-206ENST00000469704 GJD4Q96KN9 370 aaPredicted RBP37.85■■■■□ 3.65
SNX5-206ENST00000469704 CABP1Q9NZU7 370 aa37.85■■■■□ 3.65
SNX5-206ENST00000469704 FAM83GA6ND36 823 aa37.84■■■■□ 3.65
SNX5-206ENST00000469704 SBNO2Q9Y2G9 1366 aa37.83■■■■□ 3.65
SNX5-206ENST00000469704 NWD2Q9ULI1 1742 aa37.82■■■■□ 3.65
SNX5-206ENST00000469704 CLSPNQ9HAW4 1339 aa37.82■■■■□ 3.64
SNX5-206ENST00000469704 PCGF6Q9BYE7 350 aa37.81■■■■□ 3.64
SNX5-206ENST00000469704 CRYBG1Q9Y4K1 1723 aa37.8■■■■□ 3.64
SNX5-206ENST00000469704 PLCH1Q4KWH8 1693 aa37.77■■■■□ 3.64
SNX5-206ENST00000469704 ABTB2Q8N961 1025 aa37.77■■■■□ 3.64
SNX5-206ENST00000469704 TIMELESSQ9UNS1 1208 aa37.77■■■■□ 3.64
SNX5-206ENST00000469704 VPS72Q15906 364 aa37.76■■■■□ 3.64
SNX5-206ENST00000469704 UPF1Q92900 1129 aaKnown RBP eCLIP37.76■■■■□ 3.64
SNX5-206ENST00000469704 ZNF692Q9BU19 519 aaPredicted RBP37.75■■■■□ 3.63
SNX5-206ENST00000469704 ATAD2Q6PL18 1390 aa37.74■■■■□ 3.63
SNX5-206ENST00000469704 COL14A1Q05707 1796 aaKnown RBP37.73■■■■□ 3.63
SNX5-206ENST00000469704 USP6P35125 1406 aa37.71■■■■□ 3.63
SNX5-206ENST00000469704 NUTM2GQ5VZR2 741 aa37.71■■■■□ 3.63
SNX5-206ENST00000469704 NLRP13Q86W25 1043 aa37.71■■■■□ 3.63
SNX5-206ENST00000469704 BTG4Q9NY30 223 aa37.71■■■■□ 3.63
SNX5-206ENST00000469704 PRDM11Q9NQV5 511 aa37.69■■■■□ 3.62
SNX5-206ENST00000469704 SLC24A1O60721 1099 aa37.68■■■■□ 3.62
SNX5-206ENST00000469704 PHRF1Q9P1Y6 1649 aaKnown RBP37.68■■■■□ 3.62
SNX5-206ENST00000469704 GLI3P10071 1580 aa37.68■■■■□ 3.62
SNX5-206ENST00000469704 PUS7Q96PZ0 661 aaKnown RBP37.66■■■■□ 3.62
SNX5-206ENST00000469704 USP19O94966 1318 aa37.65■■■■□ 3.62
SNX5-206ENST00000469704 SSH2Q76I76 1423 aa37.65■■■■□ 3.62
SNX5-206ENST00000469704 KIAA0232Q92628 1395 aa37.65■■■■□ 3.62
SNX5-206ENST00000469704 ONECUT3O60422 494 aaPredicted RBP37.64■■■■□ 3.62
SNX5-206ENST00000469704 CCDC9Q9Y3X0 531 aaKnown RBP37.64■■■■□ 3.62
SNX5-206ENST00000469704 NRAPQ86VF7 1730 aa37.62■■■■□ 3.61
SNX5-206ENST00000469704 ZC3H6P61129 1189 aaKnown RBP37.62■■■■□ 3.61
SNX5-206ENST00000469704 CPSF1Q10570 1443 aaKnown RBP37.61■■■■□ 3.61
SNX5-206ENST00000469704 ST20-MTHFSA0A0A6YYL1 179 aa37.6■■■■□ 3.61
SNX5-206ENST00000469704 GCP02774 474 aa37.6■■■■□ 3.61
SNX5-206ENST00000469704 NLRP6P59044 892 aa37.6■■■■□ 3.61
SNX5-206ENST00000469704 AKAP12Q02952 1782 aa37.6■■■■□ 3.61
SNX5-206ENST00000469704 CPDO75976 1380 aa37.57■■■■□ 3.61
SNX5-206ENST00000469704 TESK2Q96S53 571 aa37.57■■■■□ 3.6
SNX5-206ENST00000469704 TTC21BQ7Z4L5 1316 aa37.57■■■■□ 3.6
SNX5-206ENST00000469704 CHRNA2Q15822 529 aa37.56■■■■□ 3.6
SNX5-206ENST00000469704 NRKQ7Z2Y5 1582 aa37.55■■■■□ 3.6
SNX5-206ENST00000469704 TTC21AQ8NDW8 1320 aa37.55■■■■□ 3.6
SNX5-206ENST00000469704 KTN1Q86UP2 1357 aaKnown RBP37.55■■■■□ 3.6
SNX5-206ENST00000469704 SEPT12Q8IYM1 358 aa37.54■■■■□ 3.6
SNX5-206ENST00000469704 SPATA31A5Q5VU36 1347 aa37.52■■■■□ 3.6
SNX5-206ENST00000469704 SPATA31A7Q8IWB4 1347 aa37.52■■■■□ 3.6
SNX5-206ENST00000469704 TMC1Q8TDI8 760 aa37.5■■■■□ 3.59
SNX5-206ENST00000469704 PIK3C2AO00443 1686 aa37.49■■■■□ 3.59
SNX5-206ENST00000469704 CCER1Q8TC90 406 aaPredicted RBP37.48■■■■□ 3.59
SNX5-206ENST00000469704 SLC12A5Q9H2X9 1139 aa37.48■■■■□ 3.59
SNX5-206ENST00000469704 SLIT3O75094 1523 aa37.47■■■■□ 3.59
SNX5-206ENST00000469704 HDGFL2Q7Z4V5 671 aaPredicted RBP37.47■■■■□ 3.59
SNX5-206ENST00000469704 BRWD3Q6RI45 1802 aa37.47■■■■□ 3.59
SNX5-206ENST00000469704 USP47Q96K76 1375 aa37.46■■■■□ 3.59
SNX5-206ENST00000469704 EVA1CP58658 441 aa37.46■■■■□ 3.59
SNX5-206ENST00000469704 CCDC125Q86Z20 511 aa37.46■■■■□ 3.59
SNX5-206ENST00000469704 MON2Q7Z3U7 1717 aa37.46■■■■□ 3.59
SNX5-206ENST00000469704 FAM98CQ17RN3 349 aaKnown RBP37.45■■■■□ 3.59
SNX5-206ENST00000469704 TERF2IPQ9NYB0 399 aa37.45■■■■□ 3.59
SNX5-206ENST00000469704 CD163L1Q9NR16 1453 aa37.45■■■■□ 3.59
SNX5-206ENST00000469704 KCNH5Q8NCM2 988 aa37.44■■■■□ 3.58
SNX5-206ENST00000469704 STRN4Q9NRL3 753 aa37.44■■■■□ 3.58
SNX5-206ENST00000469704 EP400Q96L91 3159 aa37.43■■■■□ 3.58
SNX5-206ENST00000469704 CAMTA1Q9Y6Y1 1673 aa37.43■■■■□ 3.58
SNX5-206ENST00000469704 NINLQ9Y2I6 1382 aa37.42■■■■□ 3.58
SNX5-206ENST00000469704 SPATA31A1Q5TZJ5 1347 aa37.42■■■■□ 3.58
SNX5-206ENST00000469704 LMO7Q8WWI1 1683 aa37.42■■■■□ 3.58
SNX5-206ENST00000469704 KRT27Q7Z3Y8 459 aa37.41■■■■□ 3.58
SNX5-206ENST00000469704 TMF1P82094 1093 aa37.4■■■■□ 3.58
SNX5-206ENST00000469704 AATKQ6ZMQ8 1374 aa37.39■■■■□ 3.58
SNX5-206ENST00000469704 A0A0G2JS52 829 aa37.38■■■■□ 3.57
SNX5-206ENST00000469704 MYT1Q01538 1121 aa37.38■■■■□ 3.57
SNX5-206ENST00000469704 USP31Q70CQ4 1352 aa37.37■■■■□ 3.57
SNX5-206ENST00000469704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.36■■■■□ 3.57
SNX5-206ENST00000469704 EDC4Q6P2E9 1401 aaKnown RBP37.36■■■■□ 3.57
SNX5-206ENST00000469704 A0A1W2PP64 1363 aa37.34■■■■□ 3.57
SNX5-206ENST00000469704 ARHGEF25Q86VW2 580 aa37.34■■■■□ 3.57
SNX5-206ENST00000469704 LARP1Q6PKG0 1096 aaKnown RBP37.33■■■■□ 3.57
SNX5-206ENST00000469704 CDCA8Q53HL2 280 aa37.32■■■■□ 3.56
SNX5-206ENST00000469704 BARGINQ6ZT62 677 aa37.32■■■■□ 3.56
SNX5-206ENST00000469704 COL5A2P05997 1499 aaPredicted RBP37.31■■■■□ 3.56
SNX5-206ENST00000469704 ZBTB7CA1YPR0 619 aa37.3■■■■□ 3.56
SNX5-206ENST00000469704 THRAP3Q9Y2W1 955 aaKnown RBP37.3■■■■□ 3.56
SNX5-206ENST00000469704 THSD7AQ9UPZ6 1657 aa37.3■■■■□ 3.56
SNX5-206ENST00000469704 USP54Q70EL1 1684 aa37.29■■■■□ 3.56
SNX5-206ENST00000469704 COL18A1P39060 1754 aa37.29■■■■□ 3.56
SNX5-206ENST00000469704 NME9Q86XW9 330 aa37.28■■■■□ 3.56
SNX5-206ENST00000469704 USP35Q9P2H5 1018 aa37.28■■■■□ 3.56
SNX5-206ENST00000469704 TCP11L2Q8N4U5 519 aa37.27■■■■□ 3.56
SNX5-206ENST00000469704 ZRANB1Q9UGI0 708 aa37.27■■■■□ 3.56
SNX5-206ENST00000469704 BLMP54132 1417 aaPredicted RBP37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms