RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 COL14A1Q05707 1796 aaKnown RBP25.16■■□□□ 1.62
TRIM56-203ENST00000467847 ONECUT3O60422 494 aaPredicted RBP25.15■■□□□ 1.62
TRIM56-203ENST00000467847 PAK3O75914 559 aaPredicted RBP25.15■■□□□ 1.62
TRIM56-203ENST00000467847 CRYBG1Q9Y4K1 1723 aa25.15■■□□□ 1.62
TRIM56-203ENST00000467847 BTG4Q9NY30 223 aa25.14■■□□□ 1.62
TRIM56-203ENST00000467847 ATP7BP35670 1465 aa25.14■■□□□ 1.61
TRIM56-203ENST00000467847 KIAA1210Q9ULL0 1709 aa25.12■■□□□ 1.61
TRIM56-203ENST00000467847 A0A0G2JS52 829 aa25.12■■□□□ 1.61
TRIM56-203ENST00000467847 MYT1Q01538 1121 aa25.12■■□□□ 1.61
TRIM56-203ENST00000467847 KRT27Q7Z3Y8 459 aa25.12■■□□□ 1.61
TRIM56-203ENST00000467847 NUDT16Q96DE0 195 aaKnown RBP25.12■■□□□ 1.61
TRIM56-203ENST00000467847 FAM98CQ17RN3 349 aaKnown RBP25.09■■□□□ 1.61
TRIM56-203ENST00000467847 CDK19Q9BWU1 502 aa25.09■■□□□ 1.61
TRIM56-203ENST00000467847 TOPAZ1Q8N9V7 1692 aa25.07■■□□□ 1.6
TRIM56-203ENST00000467847 PRDM11Q9NQV5 511 aa25.06■■□□□ 1.6
TRIM56-203ENST00000467847 PHRF1Q9P1Y6 1649 aaKnown RBP25.04■■□□□ 1.6
TRIM56-203ENST00000467847 PSDA5PKW4 1024 aaPredicted RBP25.04■■□□□ 1.6
TRIM56-203ENST00000467847 BAG6P46379 1132 aa25.04■■□□□ 1.6
TRIM56-203ENST00000467847 SPATA31A5Q5VU36 1347 aa25.04■■□□□ 1.6
TRIM56-203ENST00000467847 SPATA31A7Q8IWB4 1347 aa25.04■■□□□ 1.6
TRIM56-203ENST00000467847 LRP5O75197 1615 aa25.04■■□□□ 1.6
TRIM56-203ENST00000467847 POLR3AO14802 1390 aaPredicted RBP25.03■■□□□ 1.6
TRIM56-203ENST00000467847 NBPF1Q3BBV0 1214 aa25.02■■□□□ 1.6
TRIM56-203ENST00000467847 CCDC61Q9Y6R9 512 aa25.02■■□□□ 1.6
TRIM56-203ENST00000467847 ACEP12821 1306 aa25.02■■□□□ 1.6
TRIM56-203ENST00000467847 KIAA0232Q92628 1395 aa25.02■■□□□ 1.6
TRIM56-203ENST00000467847 NUTM2GQ5VZR2 741 aa25.01■■□□□ 1.59
TRIM56-203ENST00000467847 CHRNA2Q15822 529 aa24.99■■□□□ 1.59
TRIM56-203ENST00000467847 NBPF8Q3BBV2 869 aa24.99■■□□□ 1.59
TRIM56-203ENST00000467847 THSD7AQ9UPZ6 1657 aa24.99■■□□□ 1.59
TRIM56-203ENST00000467847 PLEKHG3A1L390 1219 aa24.98■■□□□ 1.59
TRIM56-203ENST00000467847 ZC3H6P61129 1189 aaKnown RBP24.97■■□□□ 1.59
TRIM56-203ENST00000467847 RGPD1P0DJD0 1748 aa24.96■■□□□ 1.59
TRIM56-203ENST00000467847 SPATA31A1Q5TZJ5 1347 aa24.95■■□□□ 1.58
TRIM56-203ENST00000467847 CENPJQ9HC77 1338 aaPredicted RBP24.95■■□□□ 1.58
TRIM56-203ENST00000467847 SRPK2P78362 688 aaKnown RBP24.95■■□□□ 1.58
TRIM56-203ENST00000467847 FAM182BQ5T319 152 aa24.95■■□□□ 1.58
TRIM56-203ENST00000467847 STRN4Q9NRL3 753 aa24.95■■□□□ 1.58
TRIM56-203ENST00000467847 QRICH2Q9H0J4 1663 aa24.94■■□□□ 1.58
TRIM56-203ENST00000467847 NRKQ7Z2Y5 1582 aa24.94■■□□□ 1.58
TRIM56-203ENST00000467847 ABTB2Q8N961 1025 aa24.94■■□□□ 1.58
TRIM56-203ENST00000467847 PPIP5K1Q6PFW1 1433 aa24.93■■□□□ 1.58
TRIM56-203ENST00000467847 CABP2Q9NPB3 220 aa24.91■■□□□ 1.58
TRIM56-203ENST00000467847 EVA1CP58658 441 aa24.89■■□□□ 1.58
TRIM56-203ENST00000467847 EN1Q05925 392 aaPredicted RBP24.89■■□□□ 1.58
TRIM56-203ENST00000467847 USP19O94966 1318 aa24.88■■□□□ 1.57
TRIM56-203ENST00000467847 SSH2Q76I76 1423 aa24.88■■□□□ 1.57
TRIM56-203ENST00000467847 R3HDM1Q15032 1099 aaKnown RBP24.88■■□□□ 1.57
TRIM56-203ENST00000467847 USP35Q9P2H5 1018 aa24.88■■□□□ 1.57
TRIM56-203ENST00000467847 TNS1Q9HBL0 1735 aaKnown RBP24.88■■□□□ 1.57
TRIM56-203ENST00000467847 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
TRIM56-203ENST00000467847 CPDO75976 1380 aa24.87■■□□□ 1.57
TRIM56-203ENST00000467847 CAMTA1Q9Y6Y1 1673 aa24.87■■□□□ 1.57
TRIM56-203ENST00000467847 LMO7Q8WWI1 1683 aa24.86■■□□□ 1.57
TRIM56-203ENST00000467847 NLRP13Q86W25 1043 aa24.86■■□□□ 1.57
TRIM56-203ENST00000467847 DISP2A7MBM2 1401 aa24.84■■□□□ 1.57
TRIM56-203ENST00000467847 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.57
TRIM56-203ENST00000467847 BRD4O60885 1362 aaPredicted RBP24.83■■□□□ 1.57
TRIM56-203ENST00000467847 GCP02774 474 aa24.83■■□□□ 1.57
TRIM56-203ENST00000467847 LARP1Q6PKG0 1096 aaKnown RBP24.83■■□□□ 1.57
TRIM56-203ENST00000467847 FAM196AQ6ZSG2 479 aa24.83■■□□□ 1.57
TRIM56-203ENST00000467847 BARGINQ6ZT62 677 aa24.83■■□□□ 1.57
TRIM56-203ENST00000467847 CABP1Q9NZU7 370 aa24.83■■□□□ 1.57
TRIM56-203ENST00000467847 USP6P35125 1406 aa24.81■■□□□ 1.56
TRIM56-203ENST00000467847 TRIM37O94972 964 aa24.8■■□□□ 1.56
TRIM56-203ENST00000467847 TCP11L2Q8N4U5 519 aa24.8■■□□□ 1.56
TRIM56-203ENST00000467847 SIN3AQ96ST3 1273 aa24.8■■□□□ 1.56
TRIM56-203ENST00000467847 PDE3BQ13370 1112 aa24.79■■□□□ 1.56
TRIM56-203ENST00000467847 EVC2Q86UK5 1308 aa24.79■■□□□ 1.56
TRIM56-203ENST00000467847 COL5A2P05997 1499 aaPredicted RBP24.77■■□□□ 1.56
TRIM56-203ENST00000467847 ZBTB7CA1YPR0 619 aa24.77■■□□□ 1.56
TRIM56-203ENST00000467847 NLRP6P59044 892 aa24.77■■□□□ 1.56
TRIM56-203ENST00000467847 NEUROD1Q13562 356 aa24.77■■□□□ 1.56
TRIM56-203ENST00000467847 EZH2Q15910 746 aaKnown RBP24.77■■□□□ 1.56
TRIM56-203ENST00000467847 ROCK2O75116 1388 aaKnown RBP24.77■■□□□ 1.56
TRIM56-203ENST00000467847 THRAP3Q9Y2W1 955 aaKnown RBP24.76■■□□□ 1.55
TRIM56-203ENST00000467847 PIK3C2AO00443 1686 aa24.75■■□□□ 1.55
TRIM56-203ENST00000467847 SLIT3O75094 1523 aa24.75■■□□□ 1.55
TRIM56-203ENST00000467847 APBA3O96018 575 aa24.74■■□□□ 1.55
TRIM56-203ENST00000467847 CAMKK2Q96RR4 588 aa24.74■■□□□ 1.55
TRIM56-203ENST00000467847 PARP4Q9UKK3 1724 aaKnown RBP24.74■■□□□ 1.55
TRIM56-203ENST00000467847 CRB1P82279 1406 aa24.72■■□□□ 1.55
TRIM56-203ENST00000467847 AATKQ6ZMQ8 1374 aa24.72■■□□□ 1.55
TRIM56-203ENST00000467847 YY1P25490 414 aa24.72■■□□□ 1.55
TRIM56-203ENST00000467847 PARD3Q8TEW0 1356 aa24.71■■□□□ 1.55
TRIM56-203ENST00000467847 AKAP12Q02952 1782 aa24.71■■□□□ 1.55
TRIM56-203ENST00000467847 RREB1Q92766 1687 aa24.69■■□□□ 1.54
TRIM56-203ENST00000467847 COL18A1P39060 1754 aa24.68■■□□□ 1.54
TRIM56-203ENST00000467847 ZNF692Q9BU19 519 aaPredicted RBP24.68■■□□□ 1.54
TRIM56-203ENST00000467847 TTC21BQ7Z4L5 1316 aa24.66■■□□□ 1.54
TRIM56-203ENST00000467847 DCAF8L1A6NGE4 600 aa24.66■■□□□ 1.54
TRIM56-203ENST00000467847 LRRC37A3O60309 1634 aa24.65■■□□□ 1.54
TRIM56-203ENST00000467847 CPSF1Q10570 1443 aaKnown RBP24.65■■□□□ 1.54
TRIM56-203ENST00000467847 NUP188Q5SRE5 1749 aa24.65■■□□□ 1.54
TRIM56-203ENST00000467847 TOM1L2Q6ZVM7 507 aa24.65■■□□□ 1.54
TRIM56-203ENST00000467847 NBPF14Q5TI25 921 aa24.64■■□□□ 1.54
TRIM56-203ENST00000467847 PPP1R1BQ9UD71 204 aaPredicted RBP24.64■■□□□ 1.54
TRIM56-203ENST00000467847 TTC21AQ8NDW8 1320 aa24.63■■□□□ 1.53
TRIM56-203ENST00000467847 WNK3Q9BYP7 1800 aa24.63■■□□□ 1.53
TRIM56-203ENST00000467847 RGPD5Q99666 1765 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms