RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 KIF3AQ9Y496 699 aa16.93■□□□□ 0.3
BRAT1-203ENST00000467558 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
BRAT1-203ENST00000467558 AIMP1Q12904 312 aaKnown RBP16.92■□□□□ 0.3
BRAT1-203ENST00000467558 HDGFL1Q5TGJ6 251 aa16.91■□□□□ 0.3
BRAT1-203ENST00000467558 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
BRAT1-203ENST00000467558 CSPP1Q1MSJ5 1256 aa16.91■□□□□ 0.3
BRAT1-203ENST00000467558 ZKSCAN1P17029 563 aaPredicted RBP16.9■□□□□ 0.3
BRAT1-203ENST00000467558 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
BRAT1-203ENST00000467558 NME9Q86XW9 330 aa16.9■□□□□ 0.3
BRAT1-203ENST00000467558 GCC1Q96CN9 775 aa16.9■□□□□ 0.3
BRAT1-203ENST00000467558 ADGRL2O95490 1459 aa16.9■□□□□ 0.3
BRAT1-203ENST00000467558 KCNH5Q8NCM2 988 aa16.9■□□□□ 0.3
BRAT1-203ENST00000467558 ERC2O15083 957 aa16.9■□□□□ 0.3
BRAT1-203ENST00000467558 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
BRAT1-203ENST00000467558 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
BRAT1-203ENST00000467558 C22orf23Q9BZE7 217 aa16.9■□□□□ 0.3
BRAT1-203ENST00000467558 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
BRAT1-203ENST00000467558 ANO2Q9NQ90 1003 aa16.89■□□□□ 0.29
BRAT1-203ENST00000467558 CHMP4CQ96CF2 233 aa16.89■□□□□ 0.29
BRAT1-203ENST00000467558 PZPP20742 1482 aa16.89■□□□□ 0.29
BRAT1-203ENST00000467558 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
BRAT1-203ENST00000467558 TNRQ92752 1358 aa16.88■□□□□ 0.29
BRAT1-203ENST00000467558 ARHGEF12Q9NZN5 1544 aa16.88■□□□□ 0.29
BRAT1-203ENST00000467558 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
BRAT1-203ENST00000467558 CDC45O75419 566 aa16.87■□□□□ 0.29
BRAT1-203ENST00000467558 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
BRAT1-203ENST00000467558 GOLGA6L3A6NEY3 463 aa16.87■□□□□ 0.29
BRAT1-203ENST00000467558 GLIPR1L2Q4G1C9 344 aa16.87■□□□□ 0.29
BRAT1-203ENST00000467558 GNAI2P04899 355 aa16.87■□□□□ 0.29
BRAT1-203ENST00000467558 TOMM22Q9NS69 142 aa16.86■□□□□ 0.29
BRAT1-203ENST00000467558 SURF6O75683 361 aaKnown RBP16.86■□□□□ 0.29
BRAT1-203ENST00000467558 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
BRAT1-203ENST00000467558 TESK2Q96S53 571 aa16.86■□□□□ 0.29
BRAT1-203ENST00000467558 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
BRAT1-203ENST00000467558 EMILIN1Q9Y6C2 1016 aa16.86■□□□□ 0.29
BRAT1-203ENST00000467558 AMER1Q5JTC6 1135 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-203ENST00000467558 PHF8Q9UPP1 1060 aa16.85■□□□□ 0.29
BRAT1-203ENST00000467558 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
BRAT1-203ENST00000467558 ATP6V1DQ9Y5K8 247 aa16.85■□□□□ 0.29
BRAT1-203ENST00000467558 UHRF1BP1LA0JNW5 1464 aa16.85■□□□□ 0.29
BRAT1-203ENST00000467558 RTN4Q9NQC3 1192 aaKnown RBP16.84■□□□□ 0.29
BRAT1-203ENST00000467558 RNF20Q5VTR2 975 aa16.84■□□□□ 0.29
BRAT1-203ENST00000467558 C1orf115Q9H7X2 142 aa16.84■□□□□ 0.29
BRAT1-203ENST00000467558 PRDM11Q9NQV5 511 aa16.84■□□□□ 0.29
BRAT1-203ENST00000467558 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
BRAT1-203ENST00000467558 CHMP5Q9NZZ3 219 aa16.84■□□□□ 0.29
BRAT1-203ENST00000467558 XPCQ01831 940 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-203ENST00000467558 RARSP54136 660 aaKnown RBP16.83■□□□□ 0.28
BRAT1-203ENST00000467558 TOM1L2Q6ZVM7 507 aa16.83■□□□□ 0.28
BRAT1-203ENST00000467558 STRN4Q9NRL3 753 aa16.83■□□□□ 0.28
BRAT1-203ENST00000467558 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
BRAT1-203ENST00000467558 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
BRAT1-203ENST00000467558 IFT57Q9NWB7 429 aa16.82■□□□□ 0.28
BRAT1-203ENST00000467558 NKTRP30414 1462 aaKnown RBP16.82■□□□□ 0.28
BRAT1-203ENST00000467558 G3V3G9 751 aa16.82■□□□□ 0.28
BRAT1-203ENST00000467558 DCAF8Q5TAQ9 597 aa16.82■□□□□ 0.28
BRAT1-203ENST00000467558 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
BRAT1-203ENST00000467558 SRCIN1Q9C0H9 1055 aa16.82■□□□□ 0.28
BRAT1-203ENST00000467558 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
BRAT1-203ENST00000467558 EIF2AK4Q9P2K8 1649 aaKnown RBP16.81■□□□□ 0.28
BRAT1-203ENST00000467558 CCDC34Q96HJ3 373 aa16.81■□□□□ 0.28
BRAT1-203ENST00000467558 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-203ENST00000467558 SKOR2Q2VWA4 1001 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-203ENST00000467558 FOXD4L5Q5VV16 416 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-203ENST00000467558 DUSP27Q5VZP5 1158 aa16.81■□□□□ 0.28
BRAT1-203ENST00000467558 FOXD4L4Q8WXT5 416 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-203ENST00000467558 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
BRAT1-203ENST00000467558 BACH2Q9BYV9 841 aa16.81■□□□□ 0.28
BRAT1-203ENST00000467558 ALDH1L2Q3SY69 923 aa16.8■□□□□ 0.28
BRAT1-203ENST00000467558 FAM184AQ8NB25 1140 aa16.8■□□□□ 0.28
BRAT1-203ENST00000467558 DDX49Q9Y6V7 483 aaKnown RBP16.8■□□□□ 0.28
BRAT1-203ENST00000467558 PHF14O94880 888 aa16.8■□□□□ 0.28
BRAT1-203ENST00000467558 CABP4P57796 275 aa16.8■□□□□ 0.28
BRAT1-203ENST00000467558 SSH1Q8WYL5 1049 aa16.8■□□□□ 0.28
BRAT1-203ENST00000467558 PARD3Q8TEW0 1356 aa16.8■□□□□ 0.28
BRAT1-203ENST00000467558 ASXL1Q8IXJ9 1541 aa16.79■□□□□ 0.28
BRAT1-203ENST00000467558 FOXO3O43524 673 aa16.79■□□□□ 0.28
BRAT1-203ENST00000467558 NEUROD6Q96NK8 337 aa16.79■□□□□ 0.28
BRAT1-203ENST00000467558 H3BQV1 296 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 UHRF1BP1Q6BDS2 1440 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 CPLX2Q6PUV4 134 aaKnown RBP16.78■□□□□ 0.28
BRAT1-203ENST00000467558 MCM10Q7L590 875 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 FYB1O15117 783 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 RPAP2Q8IXW5 612 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-203ENST00000467558 TMEM57Q8N5G2 664 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 ACEP12821 1306 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 RIMS2Q9UQ26 1411 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
BRAT1-203ENST00000467558 TTC21BQ7Z4L5 1316 aa16.77■□□□□ 0.28
BRAT1-203ENST00000467558 MEX3CQ5U5Q3 659 aaKnown RBP16.77■□□□□ 0.28
BRAT1-203ENST00000467558 CHAF1AQ13111 956 aaPredicted RBP16.77■□□□□ 0.27
BRAT1-203ENST00000467558 DCTN1Q14203 1278 aa16.77■□□□□ 0.27
BRAT1-203ENST00000467558 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
BRAT1-203ENST00000467558 NUCB2P80303 420 aa16.76■□□□□ 0.27
BRAT1-203ENST00000467558 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
BRAT1-203ENST00000467558 CHD1LQ86WJ1 897 aa16.76■□□□□ 0.27
BRAT1-203ENST00000467558 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms