RNA–Protein interactions for RNA: ENST00000467018.3

RPL39P38-201, Transcript of ribosomal protein L39 pseudogene 38, humanhuman

BASIC

Gene RPL39P38, Length 153 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P38-201ENST00000467018 SCARF1Q14162 830 aa6.44□□□□□ -1.38
RPL39P38-201ENST00000467018 SPIRE2Q8WWL2 714 aa6.44□□□□□ -1.38
RPL39P38-201ENST00000467018 NDUFV2P19404 249 aa6.43□□□□□ -1.38
RPL39P38-201ENST00000467018 DESI1Q6ICB0 168 aa6.43□□□□□ -1.38
RPL39P38-201ENST00000467018 PRR7Q8TB68 274 aa6.43□□□□□ -1.38
RPL39P38-201ENST00000467018 MOXD2PA6NHM9 499 aa6.42□□□□□ -1.38
RPL39P38-201ENST00000467018 SUZ12Q15022 739 aaKnown RBP6.42□□□□□ -1.38
RPL39P38-201ENST00000467018 CDK15Q96Q40 435 aa6.42□□□□□ -1.38
RPL39P38-201ENST00000467018 KCNMA1Q12791 1236 aa6.41□□□□□ -1.38
RPL39P38-201ENST00000467018 MTMR2Q13614 643 aa6.41□□□□□ -1.38
RPL39P38-201ENST00000467018 SSTR3P32745 418 aaPredicted RBP6.4□□□□□ -1.38
RPL39P38-201ENST00000467018 ITPKCQ96DU7 683 aa6.4□□□□□ -1.38
RPL39P38-201ENST00000467018 ZFAND3Q9H8U3 227 aa6.4□□□□□ -1.38
RPL39P38-201ENST00000467018 KDM2AQ9Y2K7 1162 aa6.4□□□□□ -1.38
RPL39P38-201ENST00000467018 SPDYE5A6NIY4 337 aa6.39□□□□□ -1.39
RPL39P38-201ENST00000467018 PPFIA3O75145 1194 aa6.39□□□□□ -1.39
RPL39P38-201ENST00000467018 ZIC2O95409 532 aaPredicted RBP6.39□□□□□ -1.39
RPL39P38-201ENST00000467018 KRI1Q8N9T8 703 aaKnown RBP6.39□□□□□ -1.39
RPL39P38-201ENST00000467018 FAM174AQ8TBP5 190 aa6.39□□□□□ -1.39
RPL39P38-201ENST00000467018 FOXJ1Q92949 421 aa6.39□□□□□ -1.39
RPL39P38-201ENST00000467018 MAN1A2O60476 641 aa6.38□□□□□ -1.39
RPL39P38-201ENST00000467018 NR3C2P08235 984 aa6.38□□□□□ -1.39
RPL39P38-201ENST00000467018 LYPD8Q6UX82 237 aa6.38□□□□□ -1.39
RPL39P38-201ENST00000467018 TULP1O00294 542 aaPredicted RBP6.37□□□□□ -1.39
RPL39P38-201ENST00000467018 F12P00748 615 aaPredicted RBP6.37□□□□□ -1.39
RPL39P38-201ENST00000467018 GRM5P41594 1212 aa6.37□□□□□ -1.39
RPL39P38-201ENST00000467018 NR5A1Q13285 461 aa6.37□□□□□ -1.39
RPL39P38-201ENST00000467018 C4orf48Q5BLP8 95 aa6.37□□□□□ -1.39
RPL39P38-201ENST00000467018 C6orf118Q5T5N4 469 aa6.37□□□□□ -1.39
RPL39P38-201ENST00000467018 KCTD17Q8N5Z5 321 aa6.37□□□□□ -1.39
RPL39P38-201ENST00000467018 CFAP99D6REC4 459 aa6.36□□□□□ -1.39
RPL39P38-201ENST00000467018 CTHP32929 405 aa6.36□□□□□ -1.39
RPL39P38-201ENST00000467018 KRT76Q01546 638 aa6.36□□□□□ -1.39
RPL39P38-201ENST00000467018 ARID5BQ14865 1188 aa6.36□□□□□ -1.39
RPL39P38-201ENST00000467018 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
RPL39P38-201ENST00000467018 MAP10Q9P2G4 905 aa6.36□□□□□ -1.39
RPL39P38-201ENST00000467018 SOS2Q07890 1332 aaPredicted RBP6.35□□□□□ -1.39
RPL39P38-201ENST00000467018 GJA5P36382 358 aa6.35□□□□□ -1.39
RPL39P38-201ENST00000467018 MEIOBQ8N635 442 aa6.35□□□□□ -1.39
RPL39P38-201ENST00000467018 DNMT3LQ9UJW3 386 aa6.35□□□□□ -1.39
RPL39P38-201ENST00000467018 BMP2P12643 396 aa6.34□□□□□ -1.39
RPL39P38-201ENST00000467018 RSBN1LQ6PCB5 846 aaPredicted RBP6.34□□□□□ -1.39
RPL39P38-201ENST00000467018 AMHR2Q16671 573 aa6.33□□□□□ -1.4
RPL39P38-201ENST00000467018 GIGYF2Q6Y7W6 1299 aaKnown RBP6.33□□□□□ -1.4
RPL39P38-201ENST00000467018 GPR161Q8N6U8 529 aaKnown RBP6.33□□□□□ -1.4
RPL39P38-201ENST00000467018 PCDHB15Q9Y5E8 787 aa6.33□□□□□ -1.4
RPL39P38-201ENST00000467018 RASSF7Q02833 373 aa6.32□□□□□ -1.4
RPL39P38-201ENST00000467018 TTLL12Q14166 644 aaPredicted RBP6.32□□□□□ -1.4
RPL39P38-201ENST00000467018 TMEM151AQ8N4L1 468 aa6.32□□□□□ -1.4
RPL39P38-201ENST00000467018 BEGAINQ9BUH8 593 aa6.32□□□□□ -1.4
RPL39P38-201ENST00000467018 TBC1D2Q9BYX2 928 aa6.32□□□□□ -1.4
RPL39P38-201ENST00000467018 SPTLC1O15269 473 aa6.31□□□□□ -1.4
RPL39P38-201ENST00000467018 UPP2O95045 317 aa6.31□□□□□ -1.4
RPL39P38-201ENST00000467018 GDF11O95390 407 aa6.31□□□□□ -1.4
RPL39P38-201ENST00000467018 HRCP23327 699 aa6.31□□□□□ -1.4
RPL39P38-201ENST00000467018 HAP1P54257 671 aaPredicted RBP6.31□□□□□ -1.4
RPL39P38-201ENST00000467018 BPHLQ86WA6 291 aaPredicted RBP6.31□□□□□ -1.4
RPL39P38-201ENST00000467018 C1QTNF2Q9BXJ5 285 aa6.31□□□□□ -1.4
RPL39P38-201ENST00000467018 ADAMTS8Q9UP79 889 aa6.31□□□□□ -1.4
RPL39P38-201ENST00000467018 PER1O15534 1290 aaPredicted RBP6.3□□□□□ -1.4
RPL39P38-201ENST00000467018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.3□□□□□ -1.4
RPL39P38-201ENST00000467018 SH3RF1Q7Z6J0 888 aa6.3□□□□□ -1.4
RPL39P38-201ENST00000467018 CNTNAP3BQ96NU0 1288 aa6.3□□□□□ -1.4
RPL39P38-201ENST00000467018 CNTNAP3Q9BZ76 1288 aa6.3□□□□□ -1.4
RPL39P38-201ENST00000467018 ZBTB3Q9H5J0 574 aa6.3□□□□□ -1.4
RPL39P38-201ENST00000467018 FSHRP23945 695 aa6.29□□□□□ -1.4
RPL39P38-201ENST00000467018 AGERQ15109 404 aa6.29□□□□□ -1.4
RPL39P38-201ENST00000467018 NANOS1Q8WY41 292 aaKnown RBP6.29□□□□□ -1.4
RPL39P38-201ENST00000467018 MAP4K5Q9Y4K4 846 aa6.29□□□□□ -1.4
RPL39P38-201ENST00000467018 RNF225M0QZC1 329 aaPredicted RBP6.28□□□□□ -1.4
RPL39P38-201ENST00000467018 PTSQ03393 145 aa6.28□□□□□ -1.4
RPL39P38-201ENST00000467018 DIXDC1Q155Q3 683 aa6.28□□□□□ -1.4
RPL39P38-201ENST00000467018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.28□□□□□ -1.4
RPL39P38-201ENST00000467018 PRPF38BQ5VTL8 546 aaKnown RBP6.28□□□□□ -1.4
RPL39P38-201ENST00000467018 BARGINQ6ZT62 677 aa6.28□□□□□ -1.4
RPL39P38-201ENST00000467018 CABLES1Q8TDN4 633 aa6.28□□□□□ -1.4
RPL39P38-201ENST00000467018 TSEN34Q9BSV6 310 aaKnown RBP6.28□□□□□ -1.4
RPL39P38-201ENST00000467018 TTLL8A6PVC2 850 aa6.27□□□□□ -1.41
RPL39P38-201ENST00000467018 RNFT1Q5M7Z0 435 aa6.27□□□□□ -1.41
RPL39P38-201ENST00000467018 ZNF385CQ66K41 422 aaPredicted RBP6.27□□□□□ -1.41
RPL39P38-201ENST00000467018 SH3BP5LQ7L8J4 393 aa6.27□□□□□ -1.41
RPL39P38-201ENST00000467018 TRMT44Q8IYL2 757 aaKnown RBP6.27□□□□□ -1.41
RPL39P38-201ENST00000467018 COL25A1Q9BXS0 654 aaPredicted RBP6.27□□□□□ -1.41
RPL39P38-201ENST00000467018 ZMYND10O75800 440 aa6.26□□□□□ -1.41
RPL39P38-201ENST00000467018 EMILIN1Q9Y6C2 1016 aa6.26□□□□□ -1.41
RPL39P38-201ENST00000467018 VASH1Q7L8A9 365 aaPredicted RBP6.25□□□□□ -1.41
RPL39P38-201ENST00000467018 RIC3Q7Z5B4 369 aa6.25□□□□□ -1.41
RPL39P38-201ENST00000467018 PARP9Q8IXQ6 854 aa6.25□□□□□ -1.41
RPL39P38-201ENST00000467018 CCDC116Q8IYX3 515 aa6.25□□□□□ -1.41
RPL39P38-201ENST00000467018 CCDC155Q8N6L0 562 aa6.25□□□□□ -1.41
RPL39P38-201ENST00000467018 ARHGEF15O94989 841 aa6.24□□□□□ -1.41
RPL39P38-201ENST00000467018 SLURP2P0DP57 97 aa6.24□□□□□ -1.41
RPL39P38-201ENST00000467018 QPCTQ16769 361 aa6.24□□□□□ -1.41
RPL39P38-201ENST00000467018 Q6ZVU0 165 aa6.24□□□□□ -1.41
RPL39P38-201ENST00000467018 SVOPQ8N4V2 548 aa6.24□□□□□ -1.41
RPL39P38-201ENST00000467018 ARMC2Q8NEN0 867 aa6.24□□□□□ -1.41
RPL39P38-201ENST00000467018 WHAMMQ8TF30 809 aa6.24□□□□□ -1.41
RPL39P38-201ENST00000467018 SLC35F4A4IF30 521 aa6.23□□□□□ -1.41
RPL39P38-201ENST00000467018 FIGNL2A6NMB9 653 aa6.23□□□□□ -1.41
RPL39P38-201ENST00000467018 SPINT1O43278 529 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms