RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 FLIIQ13045 1269 aa4.01□□□□□ -1.77
NUCKS1-202ENST00000464938 TRIM32Q13049 653 aa4.01□□□□□ -1.77
NUCKS1-202ENST00000464938 MSS51Q4VC12 460 aa4.01□□□□□ -1.77
NUCKS1-202ENST00000464938 PRPF38BQ5VTL8 546 aaKnown RBP4.01□□□□□ -1.77
NUCKS1-202ENST00000464938 BRICD5Q6PL45 260 aa4.01□□□□□ -1.77
NUCKS1-202ENST00000464938 BANK1Q8NDB2 785 aa4.01□□□□□ -1.77
NUCKS1-202ENST00000464938 SLC27A5Q9Y2P5 690 aa4.01□□□□□ -1.77
NUCKS1-202ENST00000464938 H3BM21 787 aa4□□□□□ -1.77
NUCKS1-202ENST00000464938 SOCS7O14512 581 aa4□□□□□ -1.77
NUCKS1-202ENST00000464938 RFC5P40937 340 aa4□□□□□ -1.77
NUCKS1-202ENST00000464938 FUT2Q10981 343 aa4□□□□□ -1.77
NUCKS1-202ENST00000464938 QPCTQ16769 361 aa4□□□□□ -1.77
NUCKS1-202ENST00000464938 TMEM259Q4ZIN3 620 aa4□□□□□ -1.77
NUCKS1-202ENST00000464938 FMNL1O95466 1100 aaPredicted RBP3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 FDX1P10109 184 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 HRCP23327 699 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 ATP6V1AP38606 617 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 MMP16P51512 607 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 SKOR1P84550 965 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 RTL5Q5HYW3 569 aaPredicted RBP3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 RNF19BQ6ZMZ0 732 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 TRIM46Q7Z4K8 759 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 C14orf37Q86TY3 774 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 SLC16A10Q8TF71 515 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 IRF7Q92985 503 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 HLA-CQ95604 372 aa3.99□□□□□ -1.77
NUCKS1-202ENST00000464938 VSIG8P0DPA2 414 aa3.98□□□□□ -1.77
NUCKS1-202ENST00000464938 MCM6Q14566 821 aa3.98□□□□□ -1.77
NUCKS1-202ENST00000464938 GRIPAP1Q4V328 841 aa3.98□□□□□ -1.77
NUCKS1-202ENST00000464938 ZMYND15Q9H091 742 aa3.98□□□□□ -1.77
NUCKS1-202ENST00000464938 SPDYE5A6NIY4 337 aa3.97□□□□□ -1.77
NUCKS1-202ENST00000464938 A6NJR5 290 aa3.97□□□□□ -1.77
NUCKS1-202ENST00000464938 GUCA2AQ02747 115 aa3.97□□□□□ -1.77
NUCKS1-202ENST00000464938 KCNMA1Q12791 1236 aa3.97□□□□□ -1.77
NUCKS1-202ENST00000464938 CABLES1Q8TDN4 633 aa3.97□□□□□ -1.77
NUCKS1-202ENST00000464938 ZBTB3Q9H5J0 574 aa3.97□□□□□ -1.77
NUCKS1-202ENST00000464938 ZBTB24O43167 697 aaPredicted RBP3.96□□□□□ -1.78
NUCKS1-202ENST00000464938 SIAH2O43255 324 aa3.96□□□□□ -1.78
NUCKS1-202ENST00000464938 DXOO77932 396 aaKnown RBP3.96□□□□□ -1.78
NUCKS1-202ENST00000464938 BMP1P13497 986 aa3.96□□□□□ -1.78
NUCKS1-202ENST00000464938 WNT7BP56706 349 aa3.96□□□□□ -1.78
NUCKS1-202ENST00000464938 SNRKQ9NRH2 765 aa3.96□□□□□ -1.78
NUCKS1-202ENST00000464938 CFAP99D6REC4 459 aa3.95□□□□□ -1.78
NUCKS1-202ENST00000464938 VEGFBP49765 207 aa3.95□□□□□ -1.78
NUCKS1-202ENST00000464938 MTMR2Q13614 643 aa3.95□□□□□ -1.78
NUCKS1-202ENST00000464938 CSPP1Q1MSJ5 1256 aa3.95□□□□□ -1.78
NUCKS1-202ENST00000464938 RC3H1Q5TC82 1133 aaKnown RBP3.95□□□□□ -1.78
NUCKS1-202ENST00000464938 DESI1Q6ICB0 168 aa3.95□□□□□ -1.78
NUCKS1-202ENST00000464938 FNBP4Q8N3X1 1017 aaPredicted RBP3.95□□□□□ -1.78
NUCKS1-202ENST00000464938 MTMR14Q8NCE2 650 aa3.95□□□□□ -1.78
NUCKS1-202ENST00000464938 Q3C1V9 767 aa3.94□□□□□ -1.78
NUCKS1-202ENST00000464938 RETREG3Q86VR2 466 aa3.94□□□□□ -1.78
NUCKS1-202ENST00000464938 SYMPKQ92797 1274 aaKnown RBP3.94□□□□□ -1.78
NUCKS1-202ENST00000464938 GJD4Q96KN9 370 aaPredicted RBP3.94□□□□□ -1.78
NUCKS1-202ENST00000464938 NUTM2BA6NNL0 878 aaPredicted RBP3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 NUTM2EB1AL46 878 aaPredicted RBP3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 AP1G2O75843 785 aa3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 USP17L8P0C7I0 530 aa3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 CTDSPL2Q05D32 466 aa3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 NUTM2DQ5VT03 806 aaPredicted RBP3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 NUTM2AQ8IVF1 878 aaPredicted RBP3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 KCTD17Q8N5Z5 321 aa3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 PRR7Q8TB68 274 aa3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 TRIM34Q9BYJ4 488 aa3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 COG6Q9Y2V7 657 aa3.93□□□□□ -1.78
NUCKS1-202ENST00000464938 C6orf229H3BNL8 230 aa3.92□□□□□ -1.78
NUCKS1-202ENST00000464938 GPR37L1O60883 481 aa3.92□□□□□ -1.78
NUCKS1-202ENST00000464938 ALDH1A1P00352 501 aa3.92□□□□□ -1.78
NUCKS1-202ENST00000464938 LYPD8Q6UX82 237 aa3.92□□□□□ -1.78
NUCKS1-202ENST00000464938 CLUAP1Q96AJ1 413 aa3.92□□□□□ -1.78
NUCKS1-202ENST00000464938 POM121Q96HA1 1249 aa3.92□□□□□ -1.78
NUCKS1-202ENST00000464938 USB1Q9BQ65 265 aaKnown RBP3.92□□□□□ -1.78
NUCKS1-202ENST00000464938 TRAK2O60296 914 aa3.91□□□□□ -1.78
NUCKS1-202ENST00000464938 UBTFP17480 764 aaKnown RBP3.91□□□□□ -1.78
NUCKS1-202ENST00000464938 ZFP42Q96MM3 310 aa3.91□□□□□ -1.78
NUCKS1-202ENST00000464938 HMX1Q9NP08 348 aaPredicted RBP3.91□□□□□ -1.78
NUCKS1-202ENST00000464938 ATP1B4Q9UN42 357 aaPredicted RBP3.91□□□□□ -1.78
NUCKS1-202ENST00000464938 CAPN5O15484 640 aaPredicted RBP3.9□□□□□ -1.79
NUCKS1-202ENST00000464938 PER1O15534 1290 aaPredicted RBP3.9□□□□□ -1.79
NUCKS1-202ENST00000464938 HELBQ8NG08 1087 aaPredicted RBP3.9□□□□□ -1.79
NUCKS1-202ENST00000464938 LRRN4Q8WUT4 740 aa3.9□□□□□ -1.79
NUCKS1-202ENST00000464938 F12P00748 615 aaPredicted RBP3.89□□□□□ -1.79
NUCKS1-202ENST00000464938 JUNDP17535 347 aa3.89□□□□□ -1.79
NUCKS1-202ENST00000464938 IRF5Q13568 498 aa3.89□□□□□ -1.79
NUCKS1-202ENST00000464938 PROSER2Q86WR7 435 aaPredicted RBP3.89□□□□□ -1.79
NUCKS1-202ENST00000464938 C1orf115Q9H7X2 142 aa3.89□□□□□ -1.79
NUCKS1-202ENST00000464938 GDPD2Q9HCC8 539 aa3.89□□□□□ -1.79
NUCKS1-202ENST00000464938 APBB1O00213 710 aa3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 SUPT5HO00267 1087 aaKnown RBP3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 KRT76Q01546 638 aa3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 RASSF7Q02833 373 aa3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 PTPRNQ16849 979 aa3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 PTCRAQ6ISU1 281 aaPredicted RBP3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 EPS8L1Q8TE68 723 aa3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 EVA1BQ9NVM1 165 aa3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 TBC1D2BQ9UPU7 963 aa3.88□□□□□ -1.79
NUCKS1-202ENST00000464938 RAD21O60216 631 aa3.87□□□□□ -1.79
NUCKS1-202ENST00000464938 XP32Q5T750 250 aa3.87□□□□□ -1.79
NUCKS1-202ENST00000464938 TMEM151AQ8N4L1 468 aa3.87□□□□□ -1.79
NUCKS1-202ENST00000464938 KLF16Q9BXK1 252 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms