RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 FAM83GA6ND36 823 aa29.66■■■□□ 2.34
CD58-204ENST00000464088 RGPD1P0DJD0 1748 aa29.62■■■□□ 2.33
CD58-204ENST00000464088 PSDA5PKW4 1024 aaPredicted RBP29.62■■■□□ 2.33
CD58-204ENST00000464088 POGKQ9P215 609 aa29.61■■■□□ 2.33
CD58-204ENST00000464088 TRPM3Q9HCF6 1732 aaPredicted RBP29.6■■■□□ 2.33
CD58-204ENST00000464088 LMOD2Q6P5Q4 547 aa29.6■■■□□ 2.33
CD58-204ENST00000464088 ADGRB2O60241 1585 aa29.6■■■□□ 2.33
CD58-204ENST00000464088 SAFB2Q14151 953 aaKnown RBP eCLIP29.59■■■□□ 2.332e-6■■■□□ 14.6
CD58-204ENST00000464088 ANKARQ7Z5J8 1434 aa29.59■■■□□ 2.33
CD58-204ENST00000464088 COL14A1Q05707 1796 aaKnown RBP29.59■■■□□ 2.33
CD58-204ENST00000464088 PLEKHG5O94827 1062 aa29.58■■■□□ 2.33
CD58-204ENST00000464088 FAM98CQ17RN3 349 aaKnown RBP29.58■■■□□ 2.33
CD58-204ENST00000464088 CARD11Q9BXL7 1154 aa29.58■■■□□ 2.33
CD58-204ENST00000464088 ALS2Q96Q42 1657 aa29.57■■■□□ 2.32
CD58-204ENST00000464088 A0A0G2JS52 829 aa29.56■■■□□ 2.32
CD58-204ENST00000464088 MYT1Q01538 1121 aa29.56■■■□□ 2.32
CD58-204ENST00000464088 BTG4Q9NY30 223 aa29.56■■■□□ 2.32
CD58-204ENST00000464088 DISP2A7MBM2 1401 aa29.55■■■□□ 2.32
CD58-204ENST00000464088 QRICH2Q9H0J4 1663 aa29.53■■■□□ 2.32
CD58-204ENST00000464088 CENPJQ9HC77 1338 aaPredicted RBP29.53■■■□□ 2.32
CD58-204ENST00000464088 EN1Q05925 392 aaPredicted RBP29.53■■■□□ 2.32
CD58-204ENST00000464088 PMFBP1Q8TBY8 1022 aa29.53■■■□□ 2.32
CD58-204ENST00000464088 TNS1Q9HBL0 1735 aaKnown RBP29.53■■■□□ 2.32
CD58-204ENST00000464088 THSD7AQ9UPZ6 1657 aa29.53■■■□□ 2.32
CD58-204ENST00000464088 MINK1Q8N4C8 1332 aaPredicted RBP29.51■■■□□ 2.32
CD58-204ENST00000464088 CRYBG1Q9Y4K1 1723 aa29.51■■■□□ 2.31
CD58-204ENST00000464088 EIF3AQ14152 1382 aaKnown RBP29.51■■■□□ 2.31
CD58-204ENST00000464088 SPATA31A5Q5VU36 1347 aa29.5■■■□□ 2.31
CD58-204ENST00000464088 SPATA31A7Q8IWB4 1347 aa29.5■■■□□ 2.31
CD58-204ENST00000464088 HIRIP3Q9BW71 556 aaPredicted RBP29.48■■■□□ 2.31
CD58-204ENST00000464088 R3HDM1Q15032 1099 aaKnown RBP29.46■■■□□ 2.31
CD58-204ENST00000464088 FAM182BQ5T319 152 aa29.45■■■□□ 2.31
CD58-204ENST00000464088 WASLO00401 505 aaPredicted RBP29.44■■■□□ 2.3
CD58-204ENST00000464088 SBNO2Q9Y2G9 1366 aa29.42■■■□□ 2.3
CD58-204ENST00000464088 USP47Q96K76 1375 aa29.41■■■□□ 2.3
CD58-204ENST00000464088 TULP4Q9NRJ4 1543 aa29.41■■■□□ 2.3
CD58-204ENST00000464088 PRR36Q9H6K5 1346 aa29.41■■■□□ 2.3
CD58-204ENST00000464088 EZH2Q15910 746 aaKnown RBP29.39■■■□□ 2.3
CD58-204ENST00000464088 CAMKK2Q96RR4 588 aa29.39■■■□□ 2.3
CD58-204ENST00000464088 SPATA31A1Q5TZJ5 1347 aa29.37■■■□□ 2.29
CD58-204ENST00000464088 ST20-MTHFSA0A0A6YYL1 179 aa29.36■■■□□ 2.29
CD58-204ENST00000464088 CDK19Q9BWU1 502 aa29.36■■■□□ 2.29
CD58-204ENST00000464088 PRDM11Q9NQV5 511 aa29.36■■■□□ 2.29
CD58-204ENST00000464088 PARD3Q8TEW0 1356 aa29.36■■■□□ 2.29
CD58-204ENST00000464088 FAM196AQ6ZSG2 479 aa29.35■■■□□ 2.29
CD58-204ENST00000464088 ATP7BP35670 1465 aa29.35■■■□□ 2.29
CD58-204ENST00000464088 TESK2Q96S53 571 aa29.34■■■□□ 2.29
CD58-204ENST00000464088 RREB1Q92766 1687 aa29.33■■■□□ 2.29
CD58-204ENST00000464088 TRIM37O94972 964 aa29.32■■■□□ 2.28
CD58-204ENST00000464088 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
CD58-204ENST00000464088 PHRF1Q9P1Y6 1649 aaKnown RBP29.31■■■□□ 2.28
CD58-204ENST00000464088 EVC2Q86UK5 1308 aa29.3■■■□□ 2.28
CD58-204ENST00000464088 NGDNQ8NEJ9 315 aaKnown RBP29.3■■■□□ 2.28
CD58-204ENST00000464088 ITSN1Q15811 1721 aa29.3■■■□□ 2.28
CD58-204ENST00000464088 KIAA0232Q92628 1395 aa29.29■■■□□ 2.28
CD58-204ENST00000464088 NUDT16Q96DE0 195 aaKnown RBP29.29■■■□□ 2.28
CD58-204ENST00000464088 PAK3O75914 559 aaPredicted RBP29.28■■■□□ 2.28
CD58-204ENST00000464088 APBA3O96018 575 aa29.27■■■□□ 2.28
CD58-204ENST00000464088 CABP2Q9NPB3 220 aa29.27■■■□□ 2.28
CD58-204ENST00000464088 NUP188Q5SRE5 1749 aa29.27■■■□□ 2.28
CD58-204ENST00000464088 SRPK2P78362 688 aaKnown RBP29.25■■■□□ 2.27
CD58-204ENST00000464088 BARGINQ6ZT62 677 aa29.25■■■□□ 2.27
CD58-204ENST00000464088 EIF4G2P78344 907 aaKnown RBP eCLIP29.23■■■□□ 2.27
CD58-204ENST00000464088 CHRNA2Q15822 529 aa29.23■■■□□ 2.27
CD58-204ENST00000464088 CCDC61Q9Y6R9 512 aa29.23■■■□□ 2.27
CD58-204ENST00000464088 STRN4Q9NRL3 753 aa29.22■■■□□ 2.27
CD58-204ENST00000464088 SLC24A1O60721 1099 aa29.21■■■□□ 2.27
CD58-204ENST00000464088 HSPA5P11021 654 aaKnown RBP29.21■■■□□ 2.27
CD58-204ENST00000464088 SSH2Q76I76 1423 aa29.2■■■□□ 2.26
CD58-204ENST00000464088 PLEKHG3A1L390 1219 aa29.18■■■□□ 2.26
CD58-204ENST00000464088 YY1P25490 414 aa29.18■■■□□ 2.26
CD58-204ENST00000464088 ZC3H6P61129 1189 aaKnown RBP29.18■■■□□ 2.26
CD58-204ENST00000464088 PDE3BQ13370 1112 aa29.18■■■□□ 2.26
CD58-204ENST00000464088 PUS7Q96PZ0 661 aaKnown RBP29.18■■■□□ 2.26
CD58-204ENST00000464088 PPIP5K1Q6PFW1 1433 aa29.18■■■□□ 2.26
CD58-204ENST00000464088 NBPF14Q5TI25 921 aa29.17■■■□□ 2.26
CD58-204ENST00000464088 LMO7Q8WWI1 1683 aa29.16■■■□□ 2.26
CD58-204ENST00000464088 CAMTA1Q9Y6Y1 1673 aa29.15■■■□□ 2.26
CD58-204ENST00000464088 POLR3AO14802 1390 aaPredicted RBP29.15■■■□□ 2.26
CD58-204ENST00000464088 NRKQ7Z2Y5 1582 aa29.15■■■□□ 2.26
CD58-204ENST00000464088 TMF1P82094 1093 aa29.15■■■□□ 2.26
CD58-204ENST00000464088 USP35Q9P2H5 1018 aa29.15■■■□□ 2.26
CD58-204ENST00000464088 EVA1CP58658 441 aa29.14■■■□□ 2.26
CD58-204ENST00000464088 CPDO75976 1380 aa29.13■■■□□ 2.25
CD58-204ENST00000464088 PARP4Q9UKK3 1724 aaKnown RBP29.12■■■□□ 2.25
CD58-204ENST00000464088 TCP11L2Q8N4U5 519 aa29.12■■■□□ 2.25
CD58-204ENST00000464088 CABP1Q9NZU7 370 aa29.12■■■□□ 2.25
CD58-204ENST00000464088 NUTM2GQ5VZR2 741 aa29.11■■■□□ 2.25
CD58-204ENST00000464088 LARP1Q6PKG0 1096 aaKnown RBP29.11■■■□□ 2.25
CD58-204ENST00000464088 THRAP3Q9Y2W1 955 aaKnown RBP29.11■■■□□ 2.25
CD58-204ENST00000464088 ACEP12821 1306 aa29.11■■■□□ 2.25
CD58-204ENST00000464088 SPON1Q9HCB6 807 aa29.1■■■□□ 2.25
CD58-204ENST00000464088 RGPD3A6NKT7 1758 aaPredicted RBP29.08■■■□□ 2.25
CD58-204ENST00000464088 RGPD4Q7Z3J3 1758 aa29.08■■■□□ 2.25
CD58-204ENST00000464088 C11orf95C9JLR9 678 aaPredicted RBP29.08■■■□□ 2.25
CD58-204ENST00000464088 KCNQ2O43526 872 aa29.08■■■□□ 2.25
CD58-204ENST00000464088 ZEB1P37275 1124 aaPredicted RBP29.08■■■□□ 2.25
CD58-204ENST00000464088 NINLQ9Y2I6 1382 aa29.08■■■□□ 2.25
CD58-204ENST00000464088 USP19O94966 1318 aa29.07■■■□□ 2.24
CD58-204ENST00000464088 AKAP12Q02952 1782 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms