RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 DLC1Q96QB1 1528 aa20.43■□□□□ 0.86
PABPC4-208ENST00000461578 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
PABPC4-208ENST00000461578 TNS1Q9HBL0 1735 aaKnown RBP20.42■□□□□ 0.86
PABPC4-208ENST00000461578 TRAK1Q9UPV9 953 aa20.42■□□□□ 0.86
PABPC4-208ENST00000461578 PAK3O75914 559 aaPredicted RBP20.41■□□□□ 0.86
PABPC4-208ENST00000461578 EZH2Q15910 746 aaKnown RBP20.41■□□□□ 0.86
PABPC4-208ENST00000461578 PRR36Q9H6K5 1346 aa20.41■□□□□ 0.86
PABPC4-208ENST00000461578 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
PABPC4-208ENST00000461578 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
PABPC4-208ENST00000461578 PRDM11Q9NQV5 511 aa20.4■□□□□ 0.86
PABPC4-208ENST00000461578 CRYBG1Q9Y4K1 1723 aa20.39■□□□□ 0.86
PABPC4-208ENST00000461578 NGDNQ8NEJ9 315 aaKnown RBP20.38■□□□□ 0.85
PABPC4-208ENST00000461578 TULP4Q9NRJ4 1543 aa20.37■□□□□ 0.85
PABPC4-208ENST00000461578 DISP2A7MBM2 1401 aa20.37■□□□□ 0.85
PABPC4-208ENST00000461578 TRIM37O94972 964 aa20.37■□□□□ 0.85
PABPC4-208ENST00000461578 ADGRB1O14514 1584 aa20.37■□□□□ 0.85
PABPC4-208ENST00000461578 EIF3AQ14152 1382 aaKnown RBP20.36■□□□□ 0.85
PABPC4-208ENST00000461578 CHRNA2Q15822 529 aa20.36■□□□□ 0.85
PABPC4-208ENST00000461578 STRN4Q9NRL3 753 aa20.36■□□□□ 0.85
PABPC4-208ENST00000461578 WASLO00401 505 aaPredicted RBP20.35■□□□□ 0.85
PABPC4-208ENST00000461578 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
PABPC4-208ENST00000461578 CAMKK2Q96RR4 588 aa20.34■□□□□ 0.85
PABPC4-208ENST00000461578 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
PABPC4-208ENST00000461578 APBA3O96018 575 aa20.33■□□□□ 0.85
PABPC4-208ENST00000461578 USP35Q9P2H5 1018 aa20.33■□□□□ 0.85
PABPC4-208ENST00000461578 KDM2AQ9Y2K7 1162 aa20.33■□□□□ 0.85
PABPC4-208ENST00000461578 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
PABPC4-208ENST00000461578 FAM196AQ6ZSG2 479 aa20.32■□□□□ 0.84
PABPC4-208ENST00000461578 ZC3H6P61129 1189 aaKnown RBP20.31■□□□□ 0.84
PABPC4-208ENST00000461578 PHRF1Q9P1Y6 1649 aaKnown RBP20.31■□□□□ 0.84
PABPC4-208ENST00000461578 ITSN1Q15811 1721 aa20.27■□□□□ 0.84
PABPC4-208ENST00000461578 ATP7BP35670 1465 aa20.27■□□□□ 0.84
PABPC4-208ENST00000461578 DCAF11Q8TEB1 546 aa20.27■□□□□ 0.84
PABPC4-208ENST00000461578 RREB1Q92766 1687 aa20.26■□□□□ 0.83
PABPC4-208ENST00000461578 EVA1CP58658 441 aa20.26■□□□□ 0.83
PABPC4-208ENST00000461578 PDE3BQ13370 1112 aa20.26■□□□□ 0.83
PABPC4-208ENST00000461578 NUDT16Q96DE0 195 aaKnown RBP20.26■□□□□ 0.83
PABPC4-208ENST00000461578 NUP188Q5SRE5 1749 aa20.25■□□□□ 0.83
PABPC4-208ENST00000461578 PARD3Q8TEW0 1356 aa20.25■□□□□ 0.83
PABPC4-208ENST00000461578 YY1P25490 414 aa20.24■□□□□ 0.83
PABPC4-208ENST00000461578 SSH2Q76I76 1423 aa20.24■□□□□ 0.83
PABPC4-208ENST00000461578 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
PABPC4-208ENST00000461578 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
PABPC4-208ENST00000461578 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
PABPC4-208ENST00000461578 LARP1Q6PKG0 1096 aaKnown RBP20.22■□□□□ 0.83
PABPC4-208ENST00000461578 BARGINQ6ZT62 677 aa20.22■□□□□ 0.83
PABPC4-208ENST00000461578 CAMTA1Q9Y6Y1 1673 aa20.2■□□□□ 0.82
PABPC4-208ENST00000461578 TCP11L2Q8N4U5 519 aa20.2■□□□□ 0.82
PABPC4-208ENST00000461578 CDK19Q9BWU1 502 aa20.2■□□□□ 0.82
PABPC4-208ENST00000461578 PPP1R1BQ9UD71 204 aaPredicted RBP20.2■□□□□ 0.82
PABPC4-208ENST00000461578 ACEP12821 1306 aa20.2■□□□□ 0.82
PABPC4-208ENST00000461578 NRKQ7Z2Y5 1582 aa20.2■□□□□ 0.82
PABPC4-208ENST00000461578 RAB3GAP2Q9H2M9 1393 aa20.2■□□□□ 0.82
PABPC4-208ENST00000461578 ABTB2Q8N961 1025 aa20.18■□□□□ 0.82
PABPC4-208ENST00000461578 TOPAZ1Q8N9V7 1692 aa20.17■□□□□ 0.82
PABPC4-208ENST00000461578 POLR3AO14802 1390 aaPredicted RBP20.17■□□□□ 0.82
PABPC4-208ENST00000461578 LMO7Q8WWI1 1683 aa20.16■□□□□ 0.82
PABPC4-208ENST00000461578 SPON1Q9HCB6 807 aa20.16■□□□□ 0.82
PABPC4-208ENST00000461578 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.81
PABPC4-208ENST00000461578 KCNQ2O43526 872 aa20.14■□□□□ 0.81
PABPC4-208ENST00000461578 CCDC61Q9Y6R9 512 aa20.14■□□□□ 0.81
PABPC4-208ENST00000461578 CPDO75976 1380 aa20.13■□□□□ 0.81
PABPC4-208ENST00000461578 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
PABPC4-208ENST00000461578 USP19O94966 1318 aa20.12■□□□□ 0.81
PABPC4-208ENST00000461578 THRAP3Q9Y2W1 955 aaKnown RBP20.12■□□□□ 0.81
PABPC4-208ENST00000461578 PLEKHG3A1L390 1219 aa20.11■□□□□ 0.81
PABPC4-208ENST00000461578 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
PABPC4-208ENST00000461578 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
PABPC4-208ENST00000461578 COL5A2P05997 1499 aaPredicted RBP20.11■□□□□ 0.81
PABPC4-208ENST00000461578 GCP02774 474 aa20.1■□□□□ 0.81
PABPC4-208ENST00000461578 NLRP13Q86W25 1043 aa20.1■□□□□ 0.81
PABPC4-208ENST00000461578 OVOS2A0A0G2JMS6 1433 aa20.09■□□□□ 0.81
PABPC4-208ENST00000461578 OVOS2A0A0J9YW53 1432 aa20.09■□□□□ 0.81
PABPC4-208ENST00000461578 OVOS2Q6IE36 1432 aa20.09■□□□□ 0.81
PABPC4-208ENST00000461578 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.81
PABPC4-208ENST00000461578 CRB1P82279 1406 aa20.08■□□□□ 0.8
PABPC4-208ENST00000461578 SRPK2P78362 688 aaKnown RBP20.07■□□□□ 0.8
PABPC4-208ENST00000461578 ANO8Q9HCE9 1232 aaPredicted RBP20.07■□□□□ 0.8
PABPC4-208ENST00000461578 PPIP5K1Q6PFW1 1433 aa20.07■□□□□ 0.8
PABPC4-208ENST00000461578 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
PABPC4-208ENST00000461578 LRRC37A3O60309 1634 aa20.06■□□□□ 0.8
PABPC4-208ENST00000461578 SBF2Q86WG5 1849 aa20.06■□□□□ 0.8
PABPC4-208ENST00000461578 C11orf95C9JLR9 678 aaPredicted RBP20.05■□□□□ 0.8
PABPC4-208ENST00000461578 PTF1AQ7RTS3 328 aa20.05■□□□□ 0.8
PABPC4-208ENST00000461578 DDB1Q16531 1140 aa20.04■□□□□ 0.8
PABPC4-208ENST00000461578 PDGFDQ9GZP0 370 aaPredicted RBP20.04■□□□□ 0.8
PABPC4-208ENST00000461578 CABP2Q9NPB3 220 aa20.04■□□□□ 0.8
PABPC4-208ENST00000461578 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
PABPC4-208ENST00000461578 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
PABPC4-208ENST00000461578 TOM1L2Q6ZVM7 507 aa20.03■□□□□ 0.8
PABPC4-208ENST00000461578 CASZ1Q86V15 1759 aa20.03■□□□□ 0.8
PABPC4-208ENST00000461578 PLSCR1O15162 318 aa20.02■□□□□ 0.8
PABPC4-208ENST00000461578 ZBTB7AO95365 584 aa20.02■□□□□ 0.8
PABPC4-208ENST00000461578 NLRP6P59044 892 aa20.02■□□□□ 0.8
PABPC4-208ENST00000461578 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
PABPC4-208ENST00000461578 BCL11BQ9C0K0 894 aaPredicted RBP20.02■□□□□ 0.8
PABPC4-208ENST00000461578 KIAA1210Q9ULL0 1709 aa20■□□□□ 0.79
PABPC4-208ENST00000461578 AATKQ6ZMQ8 1374 aa19.99■□□□□ 0.79
PABPC4-208ENST00000461578 MYOM1P52179 1685 aa19.99■□□□□ 0.79
PABPC4-208ENST00000461578 WNK3Q9BYP7 1800 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms