RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 PLEKHG5O94827 1062 aa31.92■■■□□ 2.7
TRAF4-207ENST00000461195 USP21Q9UK80 565 aa31.92■■■□□ 2.7
TRAF4-207ENST00000461195 TIMELESSQ9UNS1 1208 aa31.9■■■□□ 2.7
TRAF4-207ENST00000461195 SBNO2Q9Y2G9 1366 aa31.9■■■□□ 2.7
TRAF4-207ENST00000461195 RBM6P78332 1123 aaKnown RBP31.88■■■□□ 2.69
TRAF4-207ENST00000461195 RGS12O14924 1447 aa31.85■■■□□ 2.69
TRAF4-207ENST00000461195 CABP1Q9NZU7 370 aa31.85■■■□□ 2.69
TRAF4-207ENST00000461195 CCER1Q8TC90 406 aaPredicted RBP31.84■■■□□ 2.69
TRAF4-207ENST00000461195 TRPC5Q9UL62 973 aaPredicted RBP31.84■■■□□ 2.69
TRAF4-207ENST00000461195 BCL9LQ86UU0 1499 aa31.84■■■□□ 2.69
TRAF4-207ENST00000461195 CRYBG1Q9Y4K1 1723 aa31.82■■■□□ 2.68
TRAF4-207ENST00000461195 SLIT2O94813 1529 aa31.81■■■□□ 2.68
TRAF4-207ENST00000461195 ATRNO75882 1429 aa31.81■■■□□ 2.68
TRAF4-207ENST00000461195 ATAD2Q6PL18 1390 aa31.81■■■□□ 2.68
TRAF4-207ENST00000461195 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.8■■■□□ 2.68
TRAF4-207ENST00000461195 BRD4O60885 1362 aaPredicted RBP31.79■■■□□ 2.68
TRAF4-207ENST00000461195 PLCH1Q4KWH8 1693 aa31.77■■■□□ 2.68
TRAF4-207ENST00000461195 UNC5CLQ8IV45 518 aa31.77■■■□□ 2.68
TRAF4-207ENST00000461195 USP6P35125 1406 aa31.76■■■□□ 2.68
TRAF4-207ENST00000461195 NWD2Q9ULI1 1742 aa31.76■■■□□ 2.67
TRAF4-207ENST00000461195 NUTM2GQ5VZR2 741 aa31.75■■■□□ 2.67
TRAF4-207ENST00000461195 ABTB2Q8N961 1025 aa31.75■■■□□ 2.67
TRAF4-207ENST00000461195 PHRF1Q9P1Y6 1649 aaKnown RBP31.75■■■□□ 2.67
TRAF4-207ENST00000461195 ST20-MTHFSA0A0A6YYL1 179 aa31.74■■■□□ 2.67
TRAF4-207ENST00000461195 FAM83GA6ND36 823 aa31.74■■■□□ 2.67
TRAF4-207ENST00000461195 AKAP12Q02952 1782 aa31.73■■■□□ 2.67
TRAF4-207ENST00000461195 ZNF692Q9BU19 519 aaPredicted RBP31.72■■■□□ 2.67
TRAF4-207ENST00000461195 COL14A1Q05707 1796 aaKnown RBP31.71■■■□□ 2.67
TRAF4-207ENST00000461195 SLC24A1O60721 1099 aa31.7■■■□□ 2.67
TRAF4-207ENST00000461195 TESK2Q96S53 571 aa31.7■■■□□ 2.67
TRAF4-207ENST00000461195 USP47Q96K76 1375 aa31.69■■■□□ 2.66
TRAF4-207ENST00000461195 GJD4Q96KN9 370 aaPredicted RBP31.69■■■□□ 2.66
TRAF4-207ENST00000461195 SSH2Q76I76 1423 aa31.68■■■□□ 2.66
TRAF4-207ENST00000461195 NLRP13Q86W25 1043 aa31.68■■■□□ 2.66
TRAF4-207ENST00000461195 PUS7Q96PZ0 661 aaKnown RBP31.68■■■□□ 2.66
TRAF4-207ENST00000461195 CPSF1Q10570 1443 aaKnown RBP31.66■■■□□ 2.66
TRAF4-207ENST00000461195 PRDM11Q9NQV5 511 aa31.66■■■□□ 2.66
TRAF4-207ENST00000461195 USP19O94966 1318 aa31.66■■■□□ 2.66
TRAF4-207ENST00000461195 NRAPQ86VF7 1730 aa31.64■■■□□ 2.66
TRAF4-207ENST00000461195 BTG4Q9NY30 223 aa31.64■■■□□ 2.66
TRAF4-207ENST00000461195 KIAA0232Q92628 1395 aa31.64■■■□□ 2.66
TRAF4-207ENST00000461195 NRKQ7Z2Y5 1582 aa31.64■■■□□ 2.65
TRAF4-207ENST00000461195 VPS72Q15906 364 aa31.63■■■□□ 2.65
TRAF4-207ENST00000461195 TMC1Q8TDI8 760 aa31.63■■■□□ 2.65
TRAF4-207ENST00000461195 KTN1Q86UP2 1357 aaKnown RBP31.63■■■□□ 2.65
TRAF4-207ENST00000461195 MON2Q7Z3U7 1717 aa31.63■■■□□ 2.65
TRAF4-207ENST00000461195 PIK3C2AO00443 1686 aa31.62■■■□□ 2.65
TRAF4-207ENST00000461195 GLI3P10071 1580 aa31.62■■■□□ 2.65
TRAF4-207ENST00000461195 ZC3H6P61129 1189 aaKnown RBP31.62■■■□□ 2.65
TRAF4-207ENST00000461195 TTC21BQ7Z4L5 1316 aa31.61■■■□□ 2.65
TRAF4-207ENST00000461195 NLRP6P59044 892 aa31.61■■■□□ 2.65
TRAF4-207ENST00000461195 TTC21AQ8NDW8 1320 aa31.59■■■□□ 2.65
TRAF4-207ENST00000461195 SLC12A5Q9H2X9 1139 aa31.59■■■□□ 2.65
TRAF4-207ENST00000461195 CCDC9Q9Y3X0 531 aaKnown RBP31.59■■■□□ 2.65
TRAF4-207ENST00000461195 CD163L1Q9NR16 1453 aa31.59■■■□□ 2.65
TRAF4-207ENST00000461195 GCP02774 474 aa31.58■■■□□ 2.65
TRAF4-207ENST00000461195 CHRNA2Q15822 529 aa31.57■■■□□ 2.64
TRAF4-207ENST00000461195 HDGFL2Q7Z4V5 671 aaPredicted RBP31.57■■■□□ 2.64
TRAF4-207ENST00000461195 CPDO75976 1380 aa31.56■■■□□ 2.64
TRAF4-207ENST00000461195 TMF1P82094 1093 aa31.56■■■□□ 2.64
TRAF4-207ENST00000461195 SLIT3O75094 1523 aa31.55■■■□□ 2.64
TRAF4-207ENST00000461195 TERF2IPQ9NYB0 399 aa31.55■■■□□ 2.64
TRAF4-207ENST00000461195 NINLQ9Y2I6 1382 aa31.55■■■□□ 2.64
TRAF4-207ENST00000461195 SRCAPQ6ZRS2 3230 aa31.51■■■□□ 2.64
TRAF4-207ENST00000461195 EP400Q96L91 3159 aa31.51■■■□□ 2.64
TRAF4-207ENST00000461195 A0A1W2PP64 1363 aa31.5■■■□□ 2.63
TRAF4-207ENST00000461195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.49■■■□□ 2.63
TRAF4-207ENST00000461195 EDC4Q6P2E9 1401 aaKnown RBP31.49■■■□□ 2.63
TRAF4-207ENST00000461195 LMO7Q8WWI1 1683 aa31.48■■■□□ 2.63
TRAF4-207ENST00000461195 CDCA8Q53HL2 280 aa31.48■■■□□ 2.63
TRAF4-207ENST00000461195 ONECUT3O60422 494 aaPredicted RBP31.47■■■□□ 2.63
TRAF4-207ENST00000461195 SPATA31A5Q5VU36 1347 aa31.47■■■□□ 2.63
TRAF4-207ENST00000461195 SPATA31A7Q8IWB4 1347 aa31.47■■■□□ 2.63
TRAF4-207ENST00000461195 CAMTA1Q9Y6Y1 1673 aa31.46■■■□□ 2.63
TRAF4-207ENST00000461195 KCNH5Q8NCM2 988 aa31.46■■■□□ 2.63
TRAF4-207ENST00000461195 STRN4Q9NRL3 753 aa31.46■■■□□ 2.63
TRAF4-207ENST00000461195 SEPT12Q8IYM1 358 aa31.45■■■□□ 2.63
TRAF4-207ENST00000461195 BRWD3Q6RI45 1802 aa31.45■■■□□ 2.62
TRAF4-207ENST00000461195 EVA1CP58658 441 aa31.44■■■□□ 2.62
TRAF4-207ENST00000461195 USP54Q70EL1 1684 aa31.44■■■□□ 2.62
TRAF4-207ENST00000461195 USP31Q70CQ4 1352 aa31.43■■■□□ 2.62
TRAF4-207ENST00000461195 ZBTB7CA1YPR0 619 aa31.43■■■□□ 2.62
TRAF4-207ENST00000461195 FAM98CQ17RN3 349 aaKnown RBP31.42■■■□□ 2.62
TRAF4-207ENST00000461195 NME9Q86XW9 330 aa31.42■■■□□ 2.62
TRAF4-207ENST00000461195 ZRANB1Q9UGI0 708 aa31.41■■■□□ 2.62
TRAF4-207ENST00000461195 AATKQ6ZMQ8 1374 aa31.41■■■□□ 2.62
TRAF4-207ENST00000461195 CCDC125Q86Z20 511 aa31.4■■■□□ 2.62
TRAF4-207ENST00000461195 SPATA31A1Q5TZJ5 1347 aa31.4■■■□□ 2.62
TRAF4-207ENST00000461195 ANKRD36BQ8N2N9 1353 aa31.4■■■□□ 2.62
TRAF4-207ENST00000461195 A0A0G2JS52 829 aa31.39■■■□□ 2.62
TRAF4-207ENST00000461195 SOX12O15370 315 aa31.39■■■□□ 2.62
TRAF4-207ENST00000461195 EIF4G2P78344 907 aaKnown RBP eCLIP31.39■■■□□ 2.62
TRAF4-207ENST00000461195 MYT1Q01538 1121 aa31.39■■■□□ 2.62
TRAF4-207ENST00000461195 NFAT5O94916 1531 aa31.39■■■□□ 2.61
TRAF4-207ENST00000461195 COL18A1P39060 1754 aa31.38■■■□□ 2.61
TRAF4-207ENST00000461195 ARHGEF25Q86VW2 580 aa31.37■■■□□ 2.61
TRAF4-207ENST00000461195 COL5A2P05997 1499 aaPredicted RBP31.37■■■□□ 2.61
TRAF4-207ENST00000461195 LARP1Q6PKG0 1096 aaKnown RBP31.35■■■□□ 2.61
TRAF4-207ENST00000461195 THSD7AQ9UPZ6 1657 aa31.33■■■□□ 2.61
TRAF4-207ENST00000461195 HSPA5P11021 654 aaKnown RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms