RNA–Protein interactions for RNA: ENST00000460841.1

C4A-245, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-245ENST00000460841 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
C4A-245ENST00000460841 TRIM26Q12899 539 aaPredicted RBP22.51■■□□□ 1.19
C4A-245ENST00000460841 RALGAPBQ86X10 1494 aa22.51■■□□□ 1.19
C4A-245ENST00000460841 TRPM1Q7Z4N2 1603 aa22.5■■□□□ 1.19
C4A-245ENST00000460841 NUTM2GQ5VZR2 741 aa22.5■■□□□ 1.19
C4A-245ENST00000460841 GLI3P10071 1580 aa22.5■■□□□ 1.19
C4A-245ENST00000460841 POLR3AO14802 1390 aaPredicted RBP22.5■■□□□ 1.19
C4A-245ENST00000460841 VPS72Q15906 364 aa22.49■■□□□ 1.19
C4A-245ENST00000460841 CCDC9Q9Y3X0 531 aaKnown RBP22.49■■□□□ 1.19
C4A-245ENST00000460841 EP400Q96L91 3159 aa22.49■■□□□ 1.19
C4A-245ENST00000460841 ROCK2O75116 1388 aaKnown RBP22.49■■□□□ 1.19
C4A-245ENST00000460841 PLCH1Q4KWH8 1693 aa22.49■■□□□ 1.19
C4A-245ENST00000460841 TOPAZ1Q8N9V7 1692 aa22.49■■□□□ 1.19
C4A-245ENST00000460841 CCDC125Q86Z20 511 aa22.48■■□□□ 1.19
C4A-245ENST00000460841 QRICH2Q9H0J4 1663 aa22.48■■□□□ 1.19
C4A-245ENST00000460841 BTG4Q9NY30 223 aa22.47■■□□□ 1.19
C4A-245ENST00000460841 ZRANB1Q9UGI0 708 aa22.46■■□□□ 1.19
C4A-245ENST00000460841 PPIP5K1Q6PFW1 1433 aa22.46■■□□□ 1.19
C4A-245ENST00000460841 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.19
C4A-245ENST00000460841 CABP1Q9NZU7 370 aa22.44■■□□□ 1.18
C4A-245ENST00000460841 CRYBG1Q9Y4K1 1723 aa22.44■■□□□ 1.18
C4A-245ENST00000460841 SEPT12Q8IYM1 358 aa22.43■■□□□ 1.18
C4A-245ENST00000460841 ABTB2Q8N961 1025 aa22.43■■□□□ 1.18
C4A-245ENST00000460841 PRDM11Q9NQV5 511 aa22.43■■□□□ 1.18
C4A-245ENST00000460841 EVC2Q86UK5 1308 aa22.41■■□□□ 1.18
C4A-245ENST00000460841 ZC3H6P61129 1189 aaKnown RBP22.41■■□□□ 1.18
C4A-245ENST00000460841 CHRNA2Q15822 529 aa22.41■■□□□ 1.18
C4A-245ENST00000460841 COL14A1Q05707 1796 aaKnown RBP22.4■■□□□ 1.18
C4A-245ENST00000460841 KIAA0232Q92628 1395 aa22.4■■□□□ 1.18
C4A-245ENST00000460841 ONECUT3O60422 494 aaPredicted RBP22.4■■□□□ 1.18
C4A-245ENST00000460841 NRAPQ86VF7 1730 aa22.4■■□□□ 1.18
C4A-245ENST00000460841 TONSLQ96HA7 1378 aa22.39■■□□□ 1.18
C4A-245ENST00000460841 BRWD3Q6RI45 1802 aa22.38■■□□□ 1.17
C4A-245ENST00000460841 FAM98CQ17RN3 349 aaKnown RBP22.37■■□□□ 1.17
C4A-245ENST00000460841 CARD11Q9BXL7 1154 aa22.37■■□□□ 1.17
C4A-245ENST00000460841 PHRF1Q9P1Y6 1649 aaKnown RBP22.37■■□□□ 1.17
C4A-245ENST00000460841 A0A0G2JS52 829 aa22.36■■□□□ 1.17
C4A-245ENST00000460841 MYT1Q01538 1121 aa22.36■■□□□ 1.17
C4A-245ENST00000460841 SPATA31A5Q5VU36 1347 aa22.34■■□□□ 1.17
C4A-245ENST00000460841 SPATA31A7Q8IWB4 1347 aa22.34■■□□□ 1.17
C4A-245ENST00000460841 NLRP13Q86W25 1043 aa22.34■■□□□ 1.17
C4A-245ENST00000460841 STRN4Q9NRL3 753 aa22.34■■□□□ 1.17
C4A-245ENST00000460841 USP19O94966 1318 aa22.33■■□□□ 1.17
C4A-245ENST00000460841 USP6P35125 1406 aa22.33■■□□□ 1.17
C4A-245ENST00000460841 KRT27Q7Z3Y8 459 aa22.33■■□□□ 1.17
C4A-245ENST00000460841 GCP02774 474 aa22.32■■□□□ 1.16
C4A-245ENST00000460841 SF3B2Q13435 895 aaKnown RBP22.32■■□□□ 1.16
C4A-245ENST00000460841 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
C4A-245ENST00000460841 NLRP6P59044 892 aa22.31■■□□□ 1.16
C4A-245ENST00000460841 NRKQ7Z2Y5 1582 aa22.3■■□□□ 1.16
C4A-245ENST00000460841 BRD4O60885 1362 aaPredicted RBP22.3■■□□□ 1.16
C4A-245ENST00000460841 DEFB132Q7Z7B7 95 aa22.29■■□□□ 1.16
C4A-245ENST00000460841 SSH2Q76I76 1423 aa22.29■■□□□ 1.16
C4A-245ENST00000460841 EVA1CP58658 441 aa22.28■■□□□ 1.16
C4A-245ENST00000460841 SPATA31A1Q5TZJ5 1347 aa22.28■■□□□ 1.16
C4A-245ENST00000460841 CPDO75976 1380 aa22.27■■□□□ 1.16
C4A-245ENST00000460841 ZNF692Q9BU19 519 aaPredicted RBP22.27■■□□□ 1.16
C4A-245ENST00000460841 USP35Q9P2H5 1018 aa22.27■■□□□ 1.16
C4A-245ENST00000460841 CAMTA1Q9Y6Y1 1673 aa22.26■■□□□ 1.15
C4A-245ENST00000460841 SBNO2Q9Y2G9 1366 aa22.26■■□□□ 1.15
C4A-245ENST00000460841 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
C4A-245ENST00000460841 FAM182BQ5T319 152 aa22.26■■□□□ 1.15
C4A-245ENST00000460841 TTC21BQ7Z4L5 1316 aa22.26■■□□□ 1.15
C4A-245ENST00000460841 LARP1Q6PKG0 1096 aaKnown RBP22.25■■□□□ 1.15
C4A-245ENST00000460841 PIK3C2AO00443 1686 aa22.23■■□□□ 1.15
C4A-245ENST00000460841 CPSF1Q10570 1443 aaKnown RBP22.23■■□□□ 1.15
C4A-245ENST00000460841 LMO7Q8WWI1 1683 aa22.22■■□□□ 1.15
C4A-245ENST00000460841 KTN1Q86UP2 1357 aaKnown RBP22.22■■□□□ 1.15
C4A-245ENST00000460841 AKAP12Q02952 1782 aa22.22■■□□□ 1.15
C4A-245ENST00000460841 TMC1Q8TDI8 760 aa22.21■■□□□ 1.15
C4A-245ENST00000460841 THSD7AQ9UPZ6 1657 aa22.2■■□□□ 1.15
C4A-245ENST00000460841 SLC12A5Q9H2X9 1139 aa22.2■■□□□ 1.14
C4A-245ENST00000460841 SLIT3O75094 1523 aa22.2■■□□□ 1.14
C4A-245ENST00000460841 ST20-MTHFSA0A0A6YYL1 179 aa22.19■■□□□ 1.14
C4A-245ENST00000460841 SOX12O15370 315 aa22.19■■□□□ 1.14
C4A-245ENST00000460841 TTC21AQ8NDW8 1320 aa22.18■■□□□ 1.14
C4A-245ENST00000460841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.18■■□□□ 1.14
C4A-245ENST00000460841 PCGF6Q9BYE7 350 aa22.18■■□□□ 1.14
C4A-245ENST00000460841 BARGINQ6ZT62 677 aa22.17■■□□□ 1.14
C4A-245ENST00000460841 TCP11L2Q8N4U5 519 aa22.17■■□□□ 1.14
C4A-245ENST00000460841 TESK2Q96S53 571 aa22.17■■□□□ 1.14
C4A-245ENST00000460841 AXIN2Q9Y2T1 843 aa22.17■■□□□ 1.14
C4A-245ENST00000460841 COL5A2P05997 1499 aaPredicted RBP22.16■■□□□ 1.14
C4A-245ENST00000460841 CD163L1Q9NR16 1453 aa22.16■■□□□ 1.14
C4A-245ENST00000460841 AATKQ6ZMQ8 1374 aa22.16■■□□□ 1.14
C4A-245ENST00000460841 BAG6P46379 1132 aa22.16■■□□□ 1.14
C4A-245ENST00000460841 ARHGEF25Q86VW2 580 aa22.15■■□□□ 1.14
C4A-245ENST00000460841 NME9Q86XW9 330 aa22.14■■□□□ 1.13
C4A-245ENST00000460841 KCNH5Q8NCM2 988 aa22.14■■□□□ 1.13
C4A-245ENST00000460841 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
C4A-245ENST00000460841 MON2Q7Z3U7 1717 aa22.13■■□□□ 1.13
C4A-245ENST00000460841 COL18A1P39060 1754 aa22.12■■□□□ 1.13
C4A-245ENST00000460841 PUS7Q96PZ0 661 aaKnown RBP22.12■■□□□ 1.13
C4A-245ENST00000460841 PDE3BQ13370 1112 aa22.11■■□□□ 1.13
C4A-245ENST00000460841 THRAP3Q9Y2W1 955 aaKnown RBP22.11■■□□□ 1.13
C4A-245ENST00000460841 CRB1P82279 1406 aa22.11■■□□□ 1.13
C4A-245ENST00000460841 PSDA5PKW4 1024 aaPredicted RBP22.1■■□□□ 1.13
C4A-245ENST00000460841 FAM196AQ6ZSG2 479 aa22.1■■□□□ 1.13
C4A-245ENST00000460841 TOM1L2Q6ZVM7 507 aa22.1■■□□□ 1.13
C4A-245ENST00000460841 TRIM37O94972 964 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms