RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SKOR1P84550 965 aa6.94□□□□□ -1.3
VPS8-215ENST00000460158 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
VPS8-215ENST00000460158 CABLES1Q8TDN4 633 aa6.94□□□□□ -1.3
VPS8-215ENST00000460158 HRCP23327 699 aa6.93□□□□□ -1.3
VPS8-215ENST00000460158 RTL5Q5HYW3 569 aaPredicted RBP6.93□□□□□ -1.3
VPS8-215ENST00000460158 PPP2R2DQ66LE6 453 aa6.93□□□□□ -1.3
VPS8-215ENST00000460158 RETREG3Q86VR2 466 aa6.93□□□□□ -1.3
VPS8-215ENST00000460158 KIFC2Q96AC6 838 aa6.93□□□□□ -1.3
VPS8-215ENST00000460158 TRIM47Q96LD4 638 aa6.93□□□□□ -1.3
VPS8-215ENST00000460158 NUTM2BA6NNL0 878 aaPredicted RBP6.92□□□□□ -1.3
VPS8-215ENST00000460158 NUTM2EB1AL46 878 aaPredicted RBP6.92□□□□□ -1.3
VPS8-215ENST00000460158 WIPF1O43516 503 aa6.92□□□□□ -1.3
VPS8-215ENST00000460158 RFC5P40937 340 aa6.92□□□□□ -1.3
VPS8-215ENST00000460158 NUTM2DQ5VT03 806 aaPredicted RBP6.92□□□□□ -1.3
VPS8-215ENST00000460158 NUTM2AQ8IVF1 878 aaPredicted RBP6.92□□□□□ -1.3
VPS8-215ENST00000460158 SYMPKQ92797 1274 aaKnown RBP6.92□□□□□ -1.3
VPS8-215ENST00000460158 HPS1Q92902 700 aa6.92□□□□□ -1.3
VPS8-215ENST00000460158 ZBTB3Q9H5J0 574 aa6.92□□□□□ -1.3
VPS8-215ENST00000460158 PRPF38BQ5VTL8 546 aaKnown RBP6.91□□□□□ -1.3
VPS8-215ENST00000460158 NUDT12Q9BQG2 462 aa6.91□□□□□ -1.3
VPS8-215ENST00000460158 C6orf229H3BNL8 230 aa6.9□□□□□ -1.3
VPS8-215ENST00000460158 SNRPBP14678 240 aaKnown RBP6.9□□□□□ -1.3
VPS8-215ENST00000460158 MTMR2Q13614 643 aa6.9□□□□□ -1.3
VPS8-215ENST00000460158 TIMELESSQ9UNS1 1208 aa6.9□□□□□ -1.3
VPS8-215ENST00000460158 SIAH2O43255 324 aa6.89□□□□□ -1.31
VPS8-215ENST00000460158 ALDH1A1P00352 501 aa6.89□□□□□ -1.31
VPS8-215ENST00000460158 INSM1Q01101 510 aaPredicted RBP6.89□□□□□ -1.31
VPS8-215ENST00000460158 CFAP99D6REC4 459 aa6.88□□□□□ -1.31
VPS8-215ENST00000460158 TERTO14746 1132 aaKnown RBP6.88□□□□□ -1.31
VPS8-215ENST00000460158 STK17AQ9UEE5 414 aa6.88□□□□□ -1.31
VPS8-215ENST00000460158 SPDYE5A6NIY4 337 aa6.87□□□□□ -1.31
VPS8-215ENST00000460158 AP1G2O75843 785 aa6.87□□□□□ -1.31
VPS8-215ENST00000460158 CCNYL3P0C7X3 344 aa6.87□□□□□ -1.31
VPS8-215ENST00000460158 TMEM259Q4ZIN3 620 aa6.87□□□□□ -1.31
VPS8-215ENST00000460158 PTCRAQ6ISU1 281 aaPredicted RBP6.87□□□□□ -1.31
VPS8-215ENST00000460158 C14orf37Q86TY3 774 aa6.87□□□□□ -1.31
VPS8-215ENST00000460158 EHBP1Q8NDI1 1231 aa6.87□□□□□ -1.31
VPS8-215ENST00000460158 PRR7Q8TB68 274 aa6.87□□□□□ -1.31
VPS8-215ENST00000460158 PTPRNQ16849 979 aa6.86□□□□□ -1.31
VPS8-215ENST00000460158 TSC1Q92574 1164 aa6.86□□□□□ -1.31
VPS8-215ENST00000460158 SNRKQ9NRH2 765 aa6.86□□□□□ -1.31
VPS8-215ENST00000460158 FLIIQ13045 1269 aa6.85□□□□□ -1.31
VPS8-215ENST00000460158 MCM6Q14566 821 aa6.85□□□□□ -1.31
VPS8-215ENST00000460158 BANK1Q8NDB2 785 aa6.85□□□□□ -1.31
VPS8-215ENST00000460158 EVA1BQ9NVM1 165 aa6.85□□□□□ -1.31
VPS8-215ENST00000460158 WASF2Q9Y6W5 498 aa6.85□□□□□ -1.31
VPS8-215ENST00000460158 SH3BP2P78314 561 aa6.84□□□□□ -1.31
VPS8-215ENST00000460158 CTDSPL2Q05D32 466 aa6.84□□□□□ -1.31
VPS8-215ENST00000460158 DESI1Q6ICB0 168 aa6.84□□□□□ -1.31
VPS8-215ENST00000460158 CAPN5O15484 640 aaPredicted RBP6.83□□□□□ -1.32
VPS8-215ENST00000460158 USP17L8P0C7I0 530 aa6.83□□□□□ -1.32
VPS8-215ENST00000460158 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
VPS8-215ENST00000460158 HELBQ8NG08 1087 aaPredicted RBP6.83□□□□□ -1.32
VPS8-215ENST00000460158 UNC93B1Q9H1C4 597 aa6.83□□□□□ -1.32
VPS8-215ENST00000460158 PER1O15534 1290 aaPredicted RBP6.82□□□□□ -1.32
VPS8-215ENST00000460158 KCNH2Q12809 1159 aa6.82□□□□□ -1.32
VPS8-215ENST00000460158 ERICH6Q7L0X2 663 aa6.82□□□□□ -1.32
VPS8-215ENST00000460158 NPAS3Q8IXF0 933 aa6.82□□□□□ -1.32
VPS8-215ENST00000460158 MPNDQ8N594 471 aa6.82□□□□□ -1.32
VPS8-215ENST00000460158 MTMR14Q8NCE2 650 aa6.82□□□□□ -1.32
VPS8-215ENST00000460158 SLC16A10Q8TF71 515 aa6.82□□□□□ -1.32
VPS8-215ENST00000460158 TRIM46Q7Z4K8 759 aa6.81□□□□□ -1.32
VPS8-215ENST00000460158 LRRN4Q8WUT4 740 aa6.81□□□□□ -1.32
VPS8-215ENST00000460158 NXF1Q9UBU9 619 aaKnown RBP6.81□□□□□ -1.32
VPS8-215ENST00000460158 VARSP26640 1264 aaKnown RBP6.8□□□□□ -1.32
VPS8-215ENST00000460158 BAP1Q92560 729 aa6.8□□□□□ -1.32
VPS8-215ENST00000460158 HMX1Q9NP08 348 aaPredicted RBP6.8□□□□□ -1.32
VPS8-215ENST00000460158 BMP1P13497 986 aa6.79□□□□□ -1.32
VPS8-215ENST00000460158 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
VPS8-215ENST00000460158 LYPD8Q6UX82 237 aa6.79□□□□□ -1.32
VPS8-215ENST00000460158 ZNF511Q8NB15 262 aa6.79□□□□□ -1.32
VPS8-215ENST00000460158 CLUAP1Q96AJ1 413 aa6.79□□□□□ -1.32
VPS8-215ENST00000460158 POM121Q96HA1 1249 aa6.79□□□□□ -1.32
VPS8-215ENST00000460158 ZMYND15Q9H091 742 aa6.79□□□□□ -1.32
VPS8-215ENST00000460158 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
VPS8-215ENST00000460158 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
VPS8-215ENST00000460158 EPS8L1Q8TE68 723 aa6.77□□□□□ -1.33
VPS8-215ENST00000460158 IRF7Q92985 503 aa6.77□□□□□ -1.33
VPS8-215ENST00000460158 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.33
VPS8-215ENST00000460158 TRIM34Q9BYJ4 488 aa6.77□□□□□ -1.33
VPS8-215ENST00000460158 SOCS7O14512 581 aa6.76□□□□□ -1.33
VPS8-215ENST00000460158 NNTQ13423 1086 aa6.76□□□□□ -1.33
VPS8-215ENST00000460158 ZFP42Q96MM3 310 aa6.76□□□□□ -1.33
VPS8-215ENST00000460158 COG6Q9Y2V7 657 aa6.76□□□□□ -1.33
VPS8-215ENST00000460158 TLL2Q9Y6L7 1015 aa6.76□□□□□ -1.33
VPS8-215ENST00000460158 NR6A1Q15406 480 aa6.75□□□□□ -1.33
VPS8-215ENST00000460158 FAM174AQ8TBP5 190 aa6.75□□□□□ -1.33
VPS8-215ENST00000460158 GDPD2Q9HCC8 539 aa6.75□□□□□ -1.33
VPS8-215ENST00000460158 TBC1D2BQ9UPU7 963 aa6.75□□□□□ -1.33
VPS8-215ENST00000460158 A6NJR5 290 aa6.74□□□□□ -1.33
VPS8-215ENST00000460158 H3BM21 787 aa6.74□□□□□ -1.33
VPS8-215ENST00000460158 ADH1CP00326 375 aa6.74□□□□□ -1.33
VPS8-215ENST00000460158 SCARF1Q14162 830 aa6.74□□□□□ -1.33
VPS8-215ENST00000460158 CDK15Q96Q40 435 aa6.74□□□□□ -1.33
VPS8-215ENST00000460158 MAP10Q9P2G4 905 aa6.74□□□□□ -1.33
VPS8-215ENST00000460158 APBB1O00213 710 aa6.73□□□□□ -1.33
VPS8-215ENST00000460158 RAD21O60216 631 aa6.73□□□□□ -1.33
VPS8-215ENST00000460158 F12P00748 615 aaPredicted RBP6.73□□□□□ -1.33
VPS8-215ENST00000460158 TIMP2P16035 220 aa6.73□□□□□ -1.33
VPS8-215ENST00000460158 CTHP32929 405 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms