RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 RGPD1P0DJD0 1748 aa24.22■■□□□ 1.47
SHF-202ENST00000458022 EIF3AQ14152 1382 aaKnown RBP24.21■■□□□ 1.47
SHF-202ENST00000458022 ALS2Q96Q42 1657 aa24.21■■□□□ 1.47
SHF-202ENST00000458022 THSD7AQ9UPZ6 1657 aa24.21■■□□□ 1.47
SHF-202ENST00000458022 PRR36Q9H6K5 1346 aa24.2■■□□□ 1.46
SHF-202ENST00000458022 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
SHF-202ENST00000458022 ADGRB1O14514 1584 aa24.18■■□□□ 1.46
SHF-202ENST00000458022 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
SHF-202ENST00000458022 PRDM11Q9NQV5 511 aa24.18■■□□□ 1.46
SHF-202ENST00000458022 CAMKK2Q96RR4 588 aa24.17■■□□□ 1.46
SHF-202ENST00000458022 TULP4Q9NRJ4 1543 aa24.16■■□□□ 1.46
SHF-202ENST00000458022 TNS1Q9HBL0 1735 aaKnown RBP24.15■■□□□ 1.46
SHF-202ENST00000458022 SPATA31A1Q5TZJ5 1347 aa24.15■■□□□ 1.46
SHF-202ENST00000458022 TRAK1Q9UPV9 953 aa24.15■■□□□ 1.46
SHF-202ENST00000458022 MINK1Q8N4C8 1332 aaPredicted RBP24.14■■□□□ 1.46
SHF-202ENST00000458022 WASLO00401 505 aaPredicted RBP24.14■■□□□ 1.45
SHF-202ENST00000458022 FAM196AQ6ZSG2 479 aa24.14■■□□□ 1.45
SHF-202ENST00000458022 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.45
SHF-202ENST00000458022 NGDNQ8NEJ9 315 aaKnown RBP24.13■■□□□ 1.45
SHF-202ENST00000458022 CRYBG1Q9Y4K1 1723 aa24.13■■□□□ 1.45
SHF-202ENST00000458022 TRIM37O94972 964 aa24.12■■□□□ 1.45
SHF-202ENST00000458022 PAK3O75914 559 aaPredicted RBP24.11■■□□□ 1.45
SHF-202ENST00000458022 KIAA0232Q92628 1395 aa24.11■■□□□ 1.45
SHF-202ENST00000458022 APBA3O96018 575 aa24.08■■□□□ 1.45
SHF-202ENST00000458022 CHRNA2Q15822 529 aa24.07■■□□□ 1.44
SHF-202ENST00000458022 STRN4Q9NRL3 753 aa24.07■■□□□ 1.44
SHF-202ENST00000458022 BARGINQ6ZT62 677 aa24.05■■□□□ 1.44
SHF-202ENST00000458022 ATP7BP35670 1465 aa24.05■■□□□ 1.44
SHF-202ENST00000458022 ZC3H6P61129 1189 aaKnown RBP24.02■■□□□ 1.44
SHF-202ENST00000458022 NUDT16Q96DE0 195 aaKnown RBP24.02■■□□□ 1.44
SHF-202ENST00000458022 SSH2Q76I76 1423 aa24.01■■□□□ 1.43
SHF-202ENST00000458022 PDE3BQ13370 1112 aa24.01■■□□□ 1.43
SHF-202ENST00000458022 USP35Q9P2H5 1018 aa24.01■■□□□ 1.43
SHF-202ENST00000458022 PHRF1Q9P1Y6 1649 aaKnown RBP24■■□□□ 1.43
SHF-202ENST00000458022 YY1P25490 414 aa24■■□□□ 1.43
SHF-202ENST00000458022 EVA1CP58658 441 aa23.99■■□□□ 1.43
SHF-202ENST00000458022 NBPF8Q3BBV2 869 aa23.99■■□□□ 1.43
SHF-202ENST00000458022 NBPF14Q5TI25 921 aa23.99■■□□□ 1.43
SHF-202ENST00000458022 STAC3Q96MF2 364 aa23.99■■□□□ 1.43
SHF-202ENST00000458022 RREB1Q92766 1687 aa23.99■■□□□ 1.43
SHF-202ENST00000458022 DCAF11Q8TEB1 546 aa23.98■■□□□ 1.43
SHF-202ENST00000458022 KDM2AQ9Y2K7 1162 aa23.98■■□□□ 1.43
SHF-202ENST00000458022 POLR3AO14802 1390 aaPredicted RBP23.98■■□□□ 1.43
SHF-202ENST00000458022 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
SHF-202ENST00000458022 TCP11L2Q8N4U5 519 aa23.97■■□□□ 1.43
SHF-202ENST00000458022 CPDO75976 1380 aa23.96■■□□□ 1.43
SHF-202ENST00000458022 LARP1Q6PKG0 1096 aaKnown RBP23.96■■□□□ 1.43
SHF-202ENST00000458022 ITSN1Q15811 1721 aa23.95■■□□□ 1.42
SHF-202ENST00000458022 NUP188Q5SRE5 1749 aa23.95■■□□□ 1.42
SHF-202ENST00000458022 CAMTA1Q9Y6Y1 1673 aa23.95■■□□□ 1.42
SHF-202ENST00000458022 CDK19Q9BWU1 502 aa23.94■■□□□ 1.42
SHF-202ENST00000458022 SPON1Q9HCB6 807 aa23.94■■□□□ 1.42
SHF-202ENST00000458022 THRAP3Q9Y2W1 955 aaKnown RBP23.94■■□□□ 1.42
SHF-202ENST00000458022 ACEP12821 1306 aa23.93■■□□□ 1.42
SHF-202ENST00000458022 NRKQ7Z2Y5 1582 aa23.93■■□□□ 1.42
SHF-202ENST00000458022 USP19O94966 1318 aa23.92■■□□□ 1.42
SHF-202ENST00000458022 PLEKHG3A1L390 1219 aa23.92■■□□□ 1.42
SHF-202ENST00000458022 CCDC61Q9Y6R9 512 aa23.92■■□□□ 1.42
SHF-202ENST00000458022 NINLQ9Y2I6 1382 aa23.91■■□□□ 1.42
SHF-202ENST00000458022 C11orf95C9JLR9 678 aaPredicted RBP23.91■■□□□ 1.42
SHF-202ENST00000458022 KCNQ2O43526 872 aa23.91■■□□□ 1.42
SHF-202ENST00000458022 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
SHF-202ENST00000458022 ARHGEF28Q8N1W1 1705 aaKnown RBP23.9■■□□□ 1.42
SHF-202ENST00000458022 LMO7Q8WWI1 1683 aa23.9■■□□□ 1.42
SHF-202ENST00000458022 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
SHF-202ENST00000458022 PPP1R1BQ9UD71 204 aaPredicted RBP23.9■■□□□ 1.42
SHF-202ENST00000458022 TOPAZ1Q8N9V7 1692 aa23.87■■□□□ 1.41
SHF-202ENST00000458022 COL5A2P05997 1499 aaPredicted RBP23.86■■□□□ 1.41
SHF-202ENST00000458022 DCAF8L1A6NGE4 600 aa23.85■■□□□ 1.41
SHF-202ENST00000458022 GCP02774 474 aa23.85■■□□□ 1.41
SHF-202ENST00000458022 NLRP13Q86W25 1043 aa23.85■■□□□ 1.41
SHF-202ENST00000458022 OVOS2A0A0G2JMS6 1433 aa23.84■■□□□ 1.41
SHF-202ENST00000458022 OVOS2A0A0J9YW53 1432 aa23.84■■□□□ 1.41
SHF-202ENST00000458022 OVOS2Q6IE36 1432 aa23.84■■□□□ 1.41
SHF-202ENST00000458022 PLSCR1O15162 318 aa23.84■■□□□ 1.41
SHF-202ENST00000458022 CRB1P82279 1406 aa23.84■■□□□ 1.41
SHF-202ENST00000458022 PARP4Q9UKK3 1724 aaKnown RBP23.83■■□□□ 1.41
SHF-202ENST00000458022 PEAK1Q9H792 1746 aa23.8■■□□□ 1.4
SHF-202ENST00000458022 BRD4O60885 1362 aaPredicted RBP23.79■■□□□ 1.4
SHF-202ENST00000458022 ANO8Q9HCE9 1232 aaPredicted RBP23.79■■□□□ 1.4
SHF-202ENST00000458022 RGPD3A6NKT7 1758 aaPredicted RBP23.78■■□□□ 1.4
SHF-202ENST00000458022 RGPD4Q7Z3J3 1758 aa23.78■■□□□ 1.4
SHF-202ENST00000458022 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
SHF-202ENST00000458022 DDB1Q16531 1140 aa23.77■■□□□ 1.4
SHF-202ENST00000458022 BCL11BQ9C0K0 894 aaPredicted RBP23.77■■□□□ 1.4
SHF-202ENST00000458022 PPIP5K1Q6PFW1 1433 aa23.76■■□□□ 1.39
SHF-202ENST00000458022 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
SHF-202ENST00000458022 BCL9O00512 1426 aa23.74■■□□□ 1.39
SHF-202ENST00000458022 LRRC37A3O60309 1634 aa23.73■■□□□ 1.39
SHF-202ENST00000458022 PTF1AQ7RTS3 328 aa23.73■■□□□ 1.39
SHF-202ENST00000458022 SLIT3O75094 1523 aa23.73■■□□□ 1.39
SHF-202ENST00000458022 CASZ1Q86V15 1759 aa23.73■■□□□ 1.39
SHF-202ENST00000458022 TOM1L2Q6ZVM7 507 aa23.72■■□□□ 1.39
SHF-202ENST00000458022 PROM2Q8N271 834 aa23.72■■□□□ 1.39
SHF-202ENST00000458022 PDGFDQ9GZP0 370 aaPredicted RBP23.72■■□□□ 1.39
SHF-202ENST00000458022 USP6P35125 1406 aa23.71■■□□□ 1.39
SHF-202ENST00000458022 ZBTB7CA1YPR0 619 aa23.71■■□□□ 1.39
SHF-202ENST00000458022 PTGER2P43116 358 aa23.71■■□□□ 1.39
SHF-202ENST00000458022 NLRP6P59044 892 aa23.71■■□□□ 1.39
SHF-202ENST00000458022 MARCH10Q8NA82 808 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms