RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 UPP2O95045 317 aa8.94□□□□□ -0.98
R3HDM1-212ENST00000456040 SUZ12Q15022 739 aaKnown RBP8.94□□□□□ -0.98
R3HDM1-212ENST00000456040 LINC01559Q495D7 138 aa8.94□□□□□ -0.98
R3HDM1-212ENST00000456040 BAP1Q92560 729 aa8.94□□□□□ -0.98
R3HDM1-212ENST00000456040 CCDC102AQ96A19 550 aa8.94□□□□□ -0.98
R3HDM1-212ENST00000456040 TLL2Q9Y6L7 1015 aa8.94□□□□□ -0.98
R3HDM1-212ENST00000456040 FAM174AQ8TBP5 190 aa8.93□□□□□ -0.98
R3HDM1-212ENST00000456040 VSIG8P0DPA2 414 aa8.92□□□□□ -0.98
R3HDM1-212ENST00000456040 KCNMA1Q12791 1236 aa8.92□□□□□ -0.98
R3HDM1-212ENST00000456040 KCNH2Q12809 1159 aa8.92□□□□□ -0.98
R3HDM1-212ENST00000456040 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
R3HDM1-212ENST00000456040 FAM217BQ9NTX9 383 aaPredicted RBP8.91□□□□□ -0.98
R3HDM1-212ENST00000456040 SPDYE5A6NIY4 337 aa8.9□□□□□ -0.98
R3HDM1-212ENST00000456040 RNF225M0QZC1 329 aaPredicted RBP8.9□□□□□ -0.98
R3HDM1-212ENST00000456040 TIMP2P16035 220 aa8.9□□□□□ -0.98
R3HDM1-212ENST00000456040 TMEM151AQ8N4L1 468 aa8.89□□□□□ -0.99
R3HDM1-212ENST00000456040 KCTD17Q8N5Z5 321 aa8.89□□□□□ -0.99
R3HDM1-212ENST00000456040 CTHP32929 405 aa8.88□□□□□ -0.99
R3HDM1-212ENST00000456040 ARID5BQ14865 1188 aa8.88□□□□□ -0.99
R3HDM1-212ENST00000456040 SOBPA7XYQ1 873 aa8.87□□□□□ -0.99
R3HDM1-212ENST00000456040 PRR7Q8TB68 274 aa8.87□□□□□ -0.99
R3HDM1-212ENST00000456040 BMP2P12643 396 aa8.86□□□□□ -0.99
R3HDM1-212ENST00000456040 C6orf118Q5T5N4 469 aa8.86□□□□□ -0.99
R3HDM1-212ENST00000456040 DESI1Q6ICB0 168 aa8.86□□□□□ -0.99
R3HDM1-212ENST00000456040 SPTLC1O15269 473 aa8.85□□□□□ -0.99
R3HDM1-212ENST00000456040 GDF11O95390 407 aa8.85□□□□□ -0.99
R3HDM1-212ENST00000456040 ZIC2O95409 532 aaPredicted RBP8.85□□□□□ -0.99
R3HDM1-212ENST00000456040 NR5A1Q13285 461 aa8.85□□□□□ -0.99
R3HDM1-212ENST00000456040 MTMR2Q13614 643 aa8.85□□□□□ -0.99
R3HDM1-212ENST00000456040 AGERQ15109 404 aa8.85□□□□□ -0.99
R3HDM1-212ENST00000456040 AK7Q96M32 723 aa8.85□□□□□ -0.99
R3HDM1-212ENST00000456040 PCDHGC3Q9UN70 934 aa8.85□□□□□ -0.99
R3HDM1-212ENST00000456040 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
R3HDM1-212ENST00000456040 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
R3HDM1-212ENST00000456040 RASSF7Q02833 373 aa8.82□□□□□ -1
R3HDM1-212ENST00000456040 CDK15Q96Q40 435 aa8.82□□□□□ -1
R3HDM1-212ENST00000456040 AMHR2Q16671 573 aa8.81□□□□□ -1
R3HDM1-212ENST00000456040 SPIRE2Q8WWL2 714 aa8.81□□□□□ -1
R3HDM1-212ENST00000456040 TRIM66O15016 1216 aa8.8□□□□□ -1
R3HDM1-212ENST00000456040 TTLL12Q14166 644 aaPredicted RBP8.8□□□□□ -1
R3HDM1-212ENST00000456040 ITPKCQ96DU7 683 aa8.8□□□□□ -1
R3HDM1-212ENST00000456040 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
R3HDM1-212ENST00000456040 SLC24A3Q9HC58 644 aa8.8□□□□□ -1
R3HDM1-212ENST00000456040 NDUFV2P19404 249 aa8.79□□□□□ -1
R3HDM1-212ENST00000456040 DIXDC1Q155Q3 683 aa8.79□□□□□ -1
R3HDM1-212ENST00000456040 BPHLQ86WA6 291 aaPredicted RBP8.79□□□□□ -1
R3HDM1-212ENST00000456040 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
R3HDM1-212ENST00000456040 ZFAND3Q9H8U3 227 aa8.79□□□□□ -1
R3HDM1-212ENST00000456040 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.78□□□□□ -1
R3HDM1-212ENST00000456040 ADAMTS8Q9UP79 889 aa8.78□□□□□ -1
R3HDM1-212ENST00000456040 MOXD2PA6NHM9 499 aa8.77□□□□□ -1.01
R3HDM1-212ENST00000456040 LYPD8Q6UX82 237 aa8.77□□□□□ -1.01
R3HDM1-212ENST00000456040 CNTNAP3BQ96NU0 1288 aa8.77□□□□□ -1.01
R3HDM1-212ENST00000456040 TSEN34Q9BSV6 310 aaKnown RBP8.77□□□□□ -1.01
R3HDM1-212ENST00000456040 CNTNAP3Q9BZ76 1288 aa8.77□□□□□ -1.01
R3HDM1-212ENST00000456040 FOXJ1Q92949 421 aa8.76□□□□□ -1.01
R3HDM1-212ENST00000456040 IGHA1P01876 353 aa8.75□□□□□ -1.01
R3HDM1-212ENST00000456040 GIGYF2Q6Y7W6 1299 aaKnown RBP8.75□□□□□ -1.01
R3HDM1-212ENST00000456040 SVOPQ8N4V2 548 aa8.75□□□□□ -1.01
R3HDM1-212ENST00000456040 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
R3HDM1-212ENST00000456040 ARMC2Q8NEN0 867 aa8.75□□□□□ -1.01
R3HDM1-212ENST00000456040 GJA5P36382 358 aa8.74□□□□□ -1.01
R3HDM1-212ENST00000456040 MARSP56192 900 aaKnown RBP8.74□□□□□ -1.01
R3HDM1-212ENST00000456040 PDE4DQ08499 809 aa8.74□□□□□ -1.01
R3HDM1-212ENST00000456040 SOS2Q07890 1332 aaPredicted RBP8.74□□□□□ -1.01
R3HDM1-212ENST00000456040 GSK3AP49840 483 aa8.73□□□□□ -1.01
R3HDM1-212ENST00000456040 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
R3HDM1-212ENST00000456040 EMILIN1Q9Y6C2 1016 aa8.73□□□□□ -1.01
R3HDM1-212ENST00000456040 TTLL8A6PVC2 850 aa8.72□□□□□ -1.01
R3HDM1-212ENST00000456040 NR3C2P08235 984 aa8.72□□□□□ -1.01
R3HDM1-212ENST00000456040 ZBTB3Q9H5J0 574 aa8.72□□□□□ -1.01
R3HDM1-212ENST00000456040 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
R3HDM1-212ENST00000456040 GRM5P41594 1212 aa8.71□□□□□ -1.02
R3HDM1-212ENST00000456040 FOXK2Q01167 660 aa8.71□□□□□ -1.02
R3HDM1-212ENST00000456040 GPAT2Q6NUI2 795 aa8.71□□□□□ -1.02
R3HDM1-212ENST00000456040 VASH1Q7L8A9 365 aaPredicted RBP8.71□□□□□ -1.02
R3HDM1-212ENST00000456040 COL25A1Q9BXS0 654 aaPredicted RBP8.71□□□□□ -1.02
R3HDM1-212ENST00000456040 DNMT3AQ9Y6K1 912 aaPredicted RBP8.71□□□□□ -1.02
R3HDM1-212ENST00000456040 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
R3HDM1-212ENST00000456040 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
R3HDM1-212ENST00000456040 MAP10Q9P2G4 905 aa8.7□□□□□ -1.02
R3HDM1-212ENST00000456040 FSHRP23945 695 aa8.69□□□□□ -1.02
R3HDM1-212ENST00000456040 IRS1P35568 1242 aa8.69□□□□□ -1.02
R3HDM1-212ENST00000456040 PTSQ03393 145 aa8.69□□□□□ -1.02
R3HDM1-212ENST00000456040 NBPF14Q5TI25 921 aa8.69□□□□□ -1.02
R3HDM1-212ENST00000456040 SCARF2Q96GP6 870 aaPredicted RBP8.69□□□□□ -1.02
R3HDM1-212ENST00000456040 CCDC116Q8IYX3 515 aa8.68□□□□□ -1.02
R3HDM1-212ENST00000456040 GPR161Q8N6U8 529 aaKnown RBP8.68□□□□□ -1.02
R3HDM1-212ENST00000456040 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
R3HDM1-212ENST00000456040 PGPEP1Q9NXJ5 209 aa8.68□□□□□ -1.02
R3HDM1-212ENST00000456040 F12P00748 615 aaPredicted RBP8.67□□□□□ -1.02
R3HDM1-212ENST00000456040 RSBN1LQ6PCB5 846 aaPredicted RBP8.67□□□□□ -1.02
R3HDM1-212ENST00000456040 NANOS1Q8WY41 292 aaKnown RBP8.67□□□□□ -1.02
R3HDM1-212ENST00000456040 TSC1Q92574 1164 aa8.67□□□□□ -1.02
R3HDM1-212ENST00000456040 MAP4K5Q9Y4K4 846 aa8.67□□□□□ -1.02
R3HDM1-212ENST00000456040 FIGNL2A6NMB9 653 aa8.66□□□□□ -1.02
R3HDM1-212ENST00000456040 CFAP99D6REC4 459 aa8.66□□□□□ -1.02
R3HDM1-212ENST00000456040 KRT76Q01546 638 aa8.66□□□□□ -1.02
R3HDM1-212ENST00000456040 PRPF38BQ5VTL8 546 aaKnown RBP8.66□□□□□ -1.02
R3HDM1-212ENST00000456040 ZNF385CQ66K41 422 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms