RNA–Protein interactions for RNA: ENST00000455403.1

SAMM50P1-201, Transcript of SAMM50 sorting and assembly machinery component pseudogene 1, humanhuman

BASIC

Gene SAMM50P1, Length 1,399 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50P1-201ENST00000455403 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
SAMM50P1-201ENST00000455403 APLP1P51693 650 aa8.94□□□□□ -0.98
SAMM50P1-201ENST00000455403 SRPK2P78362 688 aaKnown RBP8.94□□□□□ -0.98
SAMM50P1-201ENST00000455403 QPCTQ16769 361 aa8.94□□□□□ -0.98
SAMM50P1-201ENST00000455403 CHD1O14646 1710 aa8.94□□□□□ -0.98
SAMM50P1-201ENST00000455403 CEP164Q9UPV0 1460 aa8.94□□□□□ -0.98
SAMM50P1-201ENST00000455403 SPTLC1O15269 473 aa8.93□□□□□ -0.98
SAMM50P1-201ENST00000455403 AP1G2O75843 785 aa8.93□□□□□ -0.98
SAMM50P1-201ENST00000455403 CSB-PGBD3P0DP91 1061 aa8.93□□□□□ -0.98
SAMM50P1-201ENST00000455403 HDGFL1Q5TGJ6 251 aa8.93□□□□□ -0.98
SAMM50P1-201ENST00000455403 NUTM1Q86Y26 1132 aa8.93□□□□□ -0.98
SAMM50P1-201ENST00000455403 IVNS1ABPQ9Y6Y0 642 aa8.93□□□□□ -0.98
SAMM50P1-201ENST00000455403 KIF13AQ9H1H9 1805 aa8.92□□□□□ -0.98
SAMM50P1-201ENST00000455403 HOXA2O43364 376 aa8.92□□□□□ -0.98
SAMM50P1-201ENST00000455403 FUT2Q10981 343 aa8.92□□□□□ -0.98
SAMM50P1-201ENST00000455403 TUSC1Q2TAM9 212 aa8.92□□□□□ -0.98
SAMM50P1-201ENST00000455403 RSBN1LQ6PCB5 846 aaPredicted RBP8.92□□□□□ -0.98
SAMM50P1-201ENST00000455403 PRM3Q9NNZ6 103 aa8.92□□□□□ -0.98
SAMM50P1-201ENST00000455403 USP17L8P0C7I0 530 aa8.91□□□□□ -0.98
SAMM50P1-201ENST00000455403 PTPN5P54829 565 aa8.91□□□□□ -0.98
SAMM50P1-201ENST00000455403 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
SAMM50P1-201ENST00000455403 GJA5P36382 358 aa8.9□□□□□ -0.98
SAMM50P1-201ENST00000455403 CCDC27Q2M243 656 aa8.9□□□□□ -0.98
SAMM50P1-201ENST00000455403 RTL5Q5HYW3 569 aaPredicted RBP8.9□□□□□ -0.98
SAMM50P1-201ENST00000455403 HCSTQ9UBK5 93 aa8.9□□□□□ -0.98
SAMM50P1-201ENST00000455403 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.98
SAMM50P1-201ENST00000455403 BAZ1BQ9UIG0 1483 aaKnown RBP8.9□□□□□ -0.99
SAMM50P1-201ENST00000455403 MOXD2PA6NHM9 499 aa8.89□□□□□ -0.99
SAMM50P1-201ENST00000455403 LILRB3O75022 631 aa8.89□□□□□ -0.99
SAMM50P1-201ENST00000455403 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
SAMM50P1-201ENST00000455403 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
SAMM50P1-201ENST00000455403 GJD4Q96KN9 370 aaPredicted RBP8.89□□□□□ -0.99
SAMM50P1-201ENST00000455403 NDUFV2P19404 249 aa8.88□□□□□ -0.99
SAMM50P1-201ENST00000455403 PCDHB15Q9Y5E8 787 aa8.88□□□□□ -0.99
SAMM50P1-201ENST00000455403 GPR37L1O60883 481 aa8.87□□□□□ -0.99
SAMM50P1-201ENST00000455403 MORN1Q5T089 497 aa8.87□□□□□ -0.99
SAMM50P1-201ENST00000455403 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.99
SAMM50P1-201ENST00000455403 PPP1R12CQ9BZL4 782 aa8.87□□□□□ -0.99
SAMM50P1-201ENST00000455403 AMOTL2Q9Y2J4 779 aa8.87□□□□□ -0.99
SAMM50P1-201ENST00000455403 PCDHB3Q9Y5E6 796 aa8.87□□□□□ -0.99
SAMM50P1-201ENST00000455403 GAPVD1Q14C86 1478 aa8.87□□□□□ -0.99
SAMM50P1-201ENST00000455403 FAM69CQ0P6D2 419 aa8.86□□□□□ -0.99
SAMM50P1-201ENST00000455403 CABLES1Q8TDN4 633 aa8.86□□□□□ -0.99
SAMM50P1-201ENST00000455403 NDUFB9Q9Y6M9 179 aa8.86□□□□□ -0.99
SAMM50P1-201ENST00000455403 FDX1P10109 184 aa8.85□□□□□ -0.99
SAMM50P1-201ENST00000455403 VAC14Q08AM6 782 aa8.85□□□□□ -0.99
SAMM50P1-201ENST00000455403 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
SAMM50P1-201ENST00000455403 HLA-CQ95604 372 aa8.85□□□□□ -0.99
SAMM50P1-201ENST00000455403 ZCCHC6Q5VYS8 1495 aaKnown RBP8.84□□□□□ -0.99
SAMM50P1-201ENST00000455403 SMARCA4P51532 1647 aa8.84□□□□□ -0.99
SAMM50P1-201ENST00000455403 PALM3A6NDB9 673 aaPredicted RBP8.84□□□□□ -0.99
SAMM50P1-201ENST00000455403 TMEM88BA6NKF7 163 aa8.84□□□□□ -0.99
SAMM50P1-201ENST00000455403 GUCA2AQ02747 115 aa8.84□□□□□ -0.99
SAMM50P1-201ENST00000455403 NEUROD1Q13562 356 aa8.84□□□□□ -0.99
SAMM50P1-201ENST00000455403 BLOC1S3Q6QNY0 202 aa8.84□□□□□ -0.99
SAMM50P1-201ENST00000455403 HMX1Q9NP08 348 aaPredicted RBP8.84□□□□□ -0.99
SAMM50P1-201ENST00000455403 NUTM2BA6NNL0 878 aaPredicted RBP8.83□□□□□ -1
SAMM50P1-201ENST00000455403 NUTM2EB1AL46 878 aaPredicted RBP8.83□□□□□ -1
SAMM50P1-201ENST00000455403 LMOD1P29536 600 aaPredicted RBP8.83□□□□□ -1
SAMM50P1-201ENST00000455403 NUTM2DQ5VT03 806 aaPredicted RBP8.83□□□□□ -1
SAMM50P1-201ENST00000455403 NUTM2AQ8IVF1 878 aaPredicted RBP8.83□□□□□ -1
SAMM50P1-201ENST00000455403 UCN2Q96RP3 112 aa8.83□□□□□ -1
SAMM50P1-201ENST00000455403 VRTNQ9H8Y1 702 aa8.83□□□□□ -1
SAMM50P1-201ENST00000455403 PCDHGC3Q9UN70 934 aa8.83□□□□□ -1
SAMM50P1-201ENST00000455403 SLC27A5Q9Y2P5 690 aa8.83□□□□□ -1
SAMM50P1-201ENST00000455403 UNCXA6NJT0 531 aa8.82□□□□□ -1
SAMM50P1-201ENST00000455403 NR1I2O75469 434 aa8.82□□□□□ -1
SAMM50P1-201ENST00000455403 WASHC4Q2M389 1173 aa8.82□□□□□ -1
SAMM50P1-201ENST00000455403 CDCA8Q53HL2 280 aa8.82□□□□□ -1
SAMM50P1-201ENST00000455403 PRPF38BQ5VTL8 546 aaKnown RBP8.82□□□□□ -1
SAMM50P1-201ENST00000455403 MTRQ99707 1265 aa8.82□□□□□ -1
SAMM50P1-201ENST00000455403 SALL2Q9Y467 1007 aaPredicted RBP8.82□□□□□ -1
SAMM50P1-201ENST00000455403 Q3C1V9 767 aa8.81□□□□□ -1
SAMM50P1-201ENST00000455403 TJAP1Q5JTD0 557 aa8.81□□□□□ -1
SAMM50P1-201ENST00000455403 TRIM34Q9BYJ4 488 aa8.81□□□□□ -1
SAMM50P1-201ENST00000455403 ALG2Q9H553 416 aa8.81□□□□□ -1
SAMM50P1-201ENST00000455403 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
SAMM50P1-201ENST00000455403 IFT140Q96RY7 1462 aa8.8□□□□□ -1
SAMM50P1-201ENST00000455403 ITGBL1O95965 494 aaPredicted RBP8.8□□□□□ -1
SAMM50P1-201ENST00000455403 COPS2P61201 443 aa8.8□□□□□ -1
SAMM50P1-201ENST00000455403 SCUBE3Q8IX30 993 aa8.8□□□□□ -1
SAMM50P1-201ENST00000455403 IL21Q9HBE4 155 aa8.8□□□□□ -1
SAMM50P1-201ENST00000455403 ZPR1O75312 459 aa8.79□□□□□ -1
SAMM50P1-201ENST00000455403 THAP11Q96EK4 314 aa8.79□□□□□ -1
SAMM50P1-201ENST00000455403 TFIP11Q9UBB9 837 aaKnown RBP8.79□□□□□ -1
SAMM50P1-201ENST00000455403 URB2Q14146 1524 aaKnown RBP8.78□□□□□ -1
SAMM50P1-201ENST00000455403 CLASP1Q7Z460 1538 aa8.78□□□□□ -1
SAMM50P1-201ENST00000455403 ATG7O95352 703 aa8.78□□□□□ -1
SAMM50P1-201ENST00000455403 MTMR2Q13614 643 aa8.78□□□□□ -1
SAMM50P1-201ENST00000455403 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
SAMM50P1-201ENST00000455403 USP35Q9P2H5 1018 aa8.78□□□□□ -1
SAMM50P1-201ENST00000455403 CTDSPL2Q05D32 466 aa8.77□□□□□ -1.01
SAMM50P1-201ENST00000455403 BRICD5Q6PL45 260 aa8.77□□□□□ -1.01
SAMM50P1-201ENST00000455403 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
SAMM50P1-201ENST00000455403 EIF4G3O43432 1585 aaKnown RBP8.77□□□□□ -1.01
SAMM50P1-201ENST00000455403 RETREG3Q86VR2 466 aa8.76□□□□□ -1.01
SAMM50P1-201ENST00000455403 PRR7Q8TB68 274 aa8.76□□□□□ -1.01
SAMM50P1-201ENST00000455403 C6orf229H3BNL8 230 aa8.75□□□□□ -1.01
SAMM50P1-201ENST00000455403 FMNL1O95466 1100 aaPredicted RBP8.75□□□□□ -1.01
SAMM50P1-201ENST00000455403 GNEQ9Y223 722 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms