RNA–Protein interactions for RNA: ENST00000452104.5

PRKD3-205, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-205ENST00000452104 TBC1D2Q9BYX2 928 aa8.07□□□□□ -1.12
PRKD3-205ENST00000452104 GOPCQ9HD26 462 aa8.07□□□□□ -1.12
PRKD3-205ENST00000452104 POLR3EQ9NVU0 708 aa8.07□□□□□ -1.12
PRKD3-205ENST00000452104 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
PRKD3-205ENST00000452104 RETREG3Q86VR2 466 aa8.06□□□□□ -1.12
PRKD3-205ENST00000452104 NUDT12Q9BQG2 462 aa8.06□□□□□ -1.12
PRKD3-205ENST00000452104 WASF2Q9Y6W5 498 aa8.06□□□□□ -1.12
PRKD3-205ENST00000452104 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
PRKD3-205ENST00000452104 NPAS3Q8IXF0 933 aa8.05□□□□□ -1.12
PRKD3-205ENST00000452104 NXF1Q9UBU9 619 aaKnown RBP8.05□□□□□ -1.12
PRKD3-205ENST00000452104 CAPN5O15484 640 aaPredicted RBP8.04□□□□□ -1.12
PRKD3-205ENST00000452104 GUCA2AQ02747 115 aa8.04□□□□□ -1.12
PRKD3-205ENST00000452104 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
PRKD3-205ENST00000452104 SPIRE2Q8WWL2 714 aa8.04□□□□□ -1.12
PRKD3-205ENST00000452104 SIAH2O43255 324 aa8.03□□□□□ -1.12
PRKD3-205ENST00000452104 IRF7Q92985 503 aa8.03□□□□□ -1.12
PRKD3-205ENST00000452104 CLK2P49760 499 aaKnown RBP8.02□□□□□ -1.13
PRKD3-205ENST00000452104 ERICH6Q7L0X2 663 aa8.02□□□□□ -1.13
PRKD3-205ENST00000452104 SYMPKQ92797 1274 aaKnown RBP8.02□□□□□ -1.13
PRKD3-205ENST00000452104 SHROOM4Q9ULL8 1493 aa8.01□□□□□ -1.13
PRKD3-205ENST00000452104 CCNYL3P0C7X3 344 aa8.01□□□□□ -1.13
PRKD3-205ENST00000452104 BMP1P13497 986 aa8.01□□□□□ -1.13
PRKD3-205ENST00000452104 PTCRAQ6ISU1 281 aaPredicted RBP8.01□□□□□ -1.13
PRKD3-205ENST00000452104 RIC3Q7Z5B4 369 aa8.01□□□□□ -1.13
PRKD3-205ENST00000452104 FDX1P10109 184 aa8□□□□□ -1.13
PRKD3-205ENST00000452104 TRIM46Q7Z4K8 759 aa8□□□□□ -1.13
PRKD3-205ENST00000452104 C14orf37Q86TY3 774 aa8□□□□□ -1.13
PRKD3-205ENST00000452104 PROCA1Q8NCQ7 364 aaPredicted RBP8□□□□□ -1.13
PRKD3-205ENST00000452104 MOXD2PA6NHM9 499 aa7.99□□□□□ -1.13
PRKD3-205ENST00000452104 C6orf229H3BNL8 230 aa7.99□□□□□ -1.13
PRKD3-205ENST00000452104 SH3BP2P78314 561 aa7.99□□□□□ -1.13
PRKD3-205ENST00000452104 CSPP1Q1MSJ5 1256 aa7.99□□□□□ -1.13
PRKD3-205ENST00000452104 NDUFV2P19404 249 aa7.98□□□□□ -1.13
PRKD3-205ENST00000452104 GMPRP36959 345 aa7.98□□□□□ -1.13
PRKD3-205ENST00000452104 PTPRNQ16849 979 aa7.98□□□□□ -1.13
PRKD3-205ENST00000452104 ZSCAN1Q8NBB4 408 aa7.98□□□□□ -1.13
PRKD3-205ENST00000452104 H3BM21 787 aa7.97□□□□□ -1.13
PRKD3-205ENST00000452104 RSBN1LQ6PCB5 846 aaPredicted RBP7.97□□□□□ -1.13
PRKD3-205ENST00000452104 LIMD1Q9UGP4 676 aa7.97□□□□□ -1.13
PRKD3-205ENST00000452104 NUTM2BA6NNL0 878 aaPredicted RBP7.96□□□□□ -1.14
PRKD3-205ENST00000452104 NUTM2EB1AL46 878 aaPredicted RBP7.96□□□□□ -1.14
PRKD3-205ENST00000452104 SPTLC1O15269 473 aa7.96□□□□□ -1.14
PRKD3-205ENST00000452104 NUTM2DQ5VT03 806 aaPredicted RBP7.96□□□□□ -1.14
PRKD3-205ENST00000452104 NUTM2AQ8IVF1 878 aaPredicted RBP7.96□□□□□ -1.14
PRKD3-205ENST00000452104 UNC93B1Q9H1C4 597 aa7.96□□□□□ -1.14
PRKD3-205ENST00000452104 EVA1BQ9NVM1 165 aa7.96□□□□□ -1.14
PRKD3-205ENST00000452104 VARSP26640 1264 aaKnown RBP7.95□□□□□ -1.14
PRKD3-205ENST00000452104 GJA5P36382 358 aa7.95□□□□□ -1.14
PRKD3-205ENST00000452104 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.95□□□□□ -1.14
PRKD3-205ENST00000452104 PCDHGC3Q9UN70 934 aa7.95□□□□□ -1.14
PRKD3-205ENST00000452104 TIMELESSQ9UNS1 1208 aa7.95□□□□□ -1.14
PRKD3-205ENST00000452104 SCARF1Q14162 830 aa7.94□□□□□ -1.14
PRKD3-205ENST00000452104 MPNDQ8N594 471 aa7.94□□□□□ -1.14
PRKD3-205ENST00000452104 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
PRKD3-205ENST00000452104 SPDYE5A6NIY4 337 aa7.93□□□□□ -1.14
PRKD3-205ENST00000452104 KCNH2Q12809 1159 aa7.93□□□□□ -1.14
PRKD3-205ENST00000452104 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
PRKD3-205ENST00000452104 ZNF511Q8NB15 262 aa7.93□□□□□ -1.14
PRKD3-205ENST00000452104 BAP1Q92560 729 aa7.93□□□□□ -1.14
PRKD3-205ENST00000452104 PCDHB15Q9Y5E8 787 aa7.93□□□□□ -1.14
PRKD3-205ENST00000452104 TLL2Q9Y6L7 1015 aa7.93□□□□□ -1.14
PRKD3-205ENST00000452104 VEGFBP49765 207 aa7.92□□□□□ -1.14
PRKD3-205ENST00000452104 NNTQ13423 1086 aa7.92□□□□□ -1.14
PRKD3-205ENST00000452104 TUSC1Q2TAM9 212 aa7.92□□□□□ -1.14
PRKD3-205ENST00000452104 DESI1Q6ICB0 168 aa7.92□□□□□ -1.14
PRKD3-205ENST00000452104 ZBTB3Q9H5J0 574 aa7.92□□□□□ -1.14
PRKD3-205ENST00000452104 ADH1CP00326 375 aa7.91□□□□□ -1.14
PRKD3-205ENST00000452104 FLIIQ13045 1269 aa7.91□□□□□ -1.14
PRKD3-205ENST00000452104 QPCTQ16769 361 aa7.91□□□□□ -1.14
PRKD3-205ENST00000452104 MRPL14Q6P1L8 145 aaKnown RBP7.91□□□□□ -1.14
PRKD3-205ENST00000452104 PRR7Q8TB68 274 aa7.91□□□□□ -1.14
PRKD3-205ENST00000452104 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
PRKD3-205ENST00000452104 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
PRKD3-205ENST00000452104 RFC5P40937 340 aa7.9□□□□□ -1.14
PRKD3-205ENST00000452104 MTMR2Q13614 643 aa7.9□□□□□ -1.14
PRKD3-205ENST00000452104 TMEM259Q4ZIN3 620 aa7.9□□□□□ -1.14
PRKD3-205ENST00000452104 PRPF38BQ5VTL8 546 aaKnown RBP7.9□□□□□ -1.14
PRKD3-205ENST00000452104 CABLES1Q8TDN4 633 aa7.9□□□□□ -1.14
PRKD3-205ENST00000452104 LILRB3O75022 631 aa7.89□□□□□ -1.15
PRKD3-205ENST00000452104 HRCP23327 699 aa7.89□□□□□ -1.15
PRKD3-205ENST00000452104 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
PRKD3-205ENST00000452104 FAM174AQ8TBP5 190 aa7.89□□□□□ -1.15
PRKD3-205ENST00000452104 AP1G2O75843 785 aa7.88□□□□□ -1.15
PRKD3-205ENST00000452104 TIMP2P16035 220 aa7.88□□□□□ -1.15
PRKD3-205ENST00000452104 PPP2R2DQ66LE6 453 aa7.88□□□□□ -1.15
PRKD3-205ENST00000452104 TSC1Q92574 1164 aa7.88□□□□□ -1.15
PRKD3-205ENST00000452104 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
PRKD3-205ENST00000452104 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
PRKD3-205ENST00000452104 SMARCA4P51532 1647 aa7.87□□□□□ -1.15
PRKD3-205ENST00000452104 VSIG8P0DPA2 414 aa7.86□□□□□ -1.15
PRKD3-205ENST00000452104 CTHP32929 405 aa7.86□□□□□ -1.15
PRKD3-205ENST00000452104 CECR2Q9BXF3 1484 aa7.86□□□□□ -1.15
PRKD3-205ENST00000452104 FBXO31Q5XUX0 539 aaPredicted RBP7.85□□□□□ -1.15
PRKD3-205ENST00000452104 BANK1Q8NDB2 785 aa7.85□□□□□ -1.15
PRKD3-205ENST00000452104 HELBQ8NG08 1087 aaPredicted RBP7.85□□□□□ -1.15
PRKD3-205ENST00000452104 UBTFP17480 764 aaKnown RBP7.84□□□□□ -1.15
PRKD3-205ENST00000452104 MCM6Q14566 821 aa7.84□□□□□ -1.15
PRKD3-205ENST00000452104 LYPD8Q6UX82 237 aa7.84□□□□□ -1.15
PRKD3-205ENST00000452104 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
PRKD3-205ENST00000452104 MAN1A2O60476 641 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms