RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 GJA5P36382 358 aa7.09□□□□□ -1.27
HMGB3P22-202ENST00000451823 ZNF511Q8NB15 262 aa7.09□□□□□ -1.27
HMGB3P22-202ENST00000451823 CABLES1Q8TDN4 633 aa7.09□□□□□ -1.27
HMGB3P22-202ENST00000451823 KIFC2Q96AC6 838 aa7.09□□□□□ -1.27
HMGB3P22-202ENST00000451823 PLEKHG3A1L390 1219 aa7.08□□□□□ -1.28
HMGB3P22-202ENST00000451823 VARSP26640 1264 aaKnown RBP7.08□□□□□ -1.28
HMGB3P22-202ENST00000451823 ZBTB3Q9H5J0 574 aa7.08□□□□□ -1.28
HMGB3P22-202ENST00000451823 NUTM2BA6NNL0 878 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P22-202ENST00000451823 NUTM2EB1AL46 878 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P22-202ENST00000451823 BMP1P13497 986 aa7.07□□□□□ -1.28
HMGB3P22-202ENST00000451823 PDE4DQ08499 809 aa7.07□□□□□ -1.28
HMGB3P22-202ENST00000451823 NUTM2DQ5VT03 806 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P22-202ENST00000451823 TRIM46Q7Z4K8 759 aa7.07□□□□□ -1.28
HMGB3P22-202ENST00000451823 NUTM2AQ8IVF1 878 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P22-202ENST00000451823 ARID5BQ14865 1188 aa7.06□□□□□ -1.28
HMGB3P22-202ENST00000451823 TSC1Q92574 1164 aa7.06□□□□□ -1.28
HMGB3P22-202ENST00000451823 FOXJ1Q92949 421 aa7.06□□□□□ -1.28
HMGB3P22-202ENST00000451823 SLC24A3Q9HC58 644 aa7.06□□□□□ -1.28
HMGB3P22-202ENST00000451823 TLL2Q9Y6L7 1015 aa7.06□□□□□ -1.28
HMGB3P22-202ENST00000451823 PER1O15534 1290 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P22-202ENST00000451823 PRPF38BQ5VTL8 546 aaKnown RBP7.05□□□□□ -1.28
HMGB3P22-202ENST00000451823 MPNDQ8N594 471 aa7.05□□□□□ -1.28
HMGB3P22-202ENST00000451823 MAP10Q9P2G4 905 aa7.05□□□□□ -1.28
HMGB3P22-202ENST00000451823 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
HMGB3P22-202ENST00000451823 NNTQ13423 1086 aa7.04□□□□□ -1.28
HMGB3P22-202ENST00000451823 AGERQ15109 404 aa7.04□□□□□ -1.28
HMGB3P22-202ENST00000451823 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
HMGB3P22-202ENST00000451823 FAM174AQ8TBP5 190 aa7.04□□□□□ -1.28
HMGB3P22-202ENST00000451823 ZFP42Q96MM3 310 aa7.04□□□□□ -1.28
HMGB3P22-202ENST00000451823 QPCTQ16769 361 aa7.03□□□□□ -1.28
HMGB3P22-202ENST00000451823 MYSM1Q5VVJ2 828 aa7.03□□□□□ -1.28
HMGB3P22-202ENST00000451823 NXF1Q9UBU9 619 aaKnown RBP7.03□□□□□ -1.28
HMGB3P22-202ENST00000451823 WIPF1O43516 503 aa7.02□□□□□ -1.29
HMGB3P22-202ENST00000451823 F12P00748 615 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P22-202ENST00000451823 WDR4P57081 412 aaKnown RBP7.02□□□□□ -1.29
HMGB3P22-202ENST00000451823 RTL5Q5HYW3 569 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P22-202ENST00000451823 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
HMGB3P22-202ENST00000451823 POLR3EQ9NVU0 708 aa7.02□□□□□ -1.29
HMGB3P22-202ENST00000451823 LILRB3O75022 631 aa7.01□□□□□ -1.29
HMGB3P22-202ENST00000451823 VEGFBP49765 207 aa7.01□□□□□ -1.29
HMGB3P22-202ENST00000451823 INSM1Q01101 510 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P22-202ENST00000451823 CDK15Q96Q40 435 aa7.01□□□□□ -1.29
HMGB3P22-202ENST00000451823 SLC24A1O60721 1099 aa7□□□□□ -1.29
HMGB3P22-202ENST00000451823 GRM5P41594 1212 aa7□□□□□ -1.29
HMGB3P22-202ENST00000451823 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
HMGB3P22-202ENST00000451823 PURBQ96QR8 312 aaKnown RBP7□□□□□ -1.29
HMGB3P22-202ENST00000451823 KLF16Q9BXK1 252 aaPredicted RBP7□□□□□ -1.29
HMGB3P22-202ENST00000451823 TIMP2P16035 220 aa6.99□□□□□ -1.29
HMGB3P22-202ENST00000451823 SCARF1Q14162 830 aa6.99□□□□□ -1.29
HMGB3P22-202ENST00000451823 MRPL14Q6P1L8 145 aaKnown RBP6.99□□□□□ -1.29
HMGB3P22-202ENST00000451823 BPHLQ86WA6 291 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P22-202ENST00000451823 ADH1CP00326 375 aa6.98□□□□□ -1.29
HMGB3P22-202ENST00000451823 TUSC1Q2TAM9 212 aa6.98□□□□□ -1.29
HMGB3P22-202ENST00000451823 RSPH6AQ9H0K4 717 aa6.98□□□□□ -1.29
HMGB3P22-202ENST00000451823 STK17AQ9UEE5 414 aa6.98□□□□□ -1.29
HMGB3P22-202ENST00000451823 SOBPA7XYQ1 873 aa6.97□□□□□ -1.29
HMGB3P22-202ENST00000451823 ZIC2O95409 532 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P22-202ENST00000451823 CTDSPL2Q05D32 466 aa6.97□□□□□ -1.29
HMGB3P22-202ENST00000451823 NR5A1Q13285 461 aa6.97□□□□□ -1.29
HMGB3P22-202ENST00000451823 ARMC2Q8NEN0 867 aa6.97□□□□□ -1.29
HMGB3P22-202ENST00000451823 ZFAND3Q9H8U3 227 aa6.97□□□□□ -1.29
HMGB3P22-202ENST00000451823 NR3C2P08235 984 aa6.96□□□□□ -1.3
HMGB3P22-202ENST00000451823 GMPRP36959 345 aa6.96□□□□□ -1.3
HMGB3P22-202ENST00000451823 IRF7Q92985 503 aa6.96□□□□□ -1.3
HMGB3P22-202ENST00000451823 ITPKCQ96DU7 683 aa6.96□□□□□ -1.3
HMGB3P22-202ENST00000451823 ATP1B4Q9UN42 357 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P22-202ENST00000451823 CLK2P49760 499 aaKnown RBP6.95□□□□□ -1.3
HMGB3P22-202ENST00000451823 C6orf118Q5T5N4 469 aa6.95□□□□□ -1.3
HMGB3P22-202ENST00000451823 NPAS3Q8IXF0 933 aa6.95□□□□□ -1.3
HMGB3P22-202ENST00000451823 MAGEB6P1A0A0J9YX57 407 aa6.94□□□□□ -1.3
HMGB3P22-202ENST00000451823 HELBQ8NG08 1087 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P22-202ENST00000451823 H3BM21 787 aa6.93□□□□□ -1.3
HMGB3P22-202ENST00000451823 VASH1Q7L8A9 365 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P22-202ENST00000451823 SH3RF1Q7Z6J0 888 aa6.93□□□□□ -1.3
HMGB3P22-202ENST00000451823 PROCA1Q8NCQ7 364 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P22-202ENST00000451823 BMP2P12643 396 aa6.92□□□□□ -1.3
HMGB3P22-202ENST00000451823 ERBB4Q15303 1308 aa6.92□□□□□ -1.3
HMGB3P22-202ENST00000451823 UPP2O95045 317 aa6.91□□□□□ -1.3
HMGB3P22-202ENST00000451823 SKIV2LQ15477 1246 aaKnown RBP6.91□□□□□ -1.3
HMGB3P22-202ENST00000451823 NBPF14Q5TI25 921 aa6.91□□□□□ -1.3
HMGB3P22-202ENST00000451823 SH3BP5LQ7L8J4 393 aa6.91□□□□□ -1.3
HMGB3P22-202ENST00000451823 CARD14Q9BXL6 1004 aa6.91□□□□□ -1.3
HMGB3P22-202ENST00000451823 MAN1A2O60476 641 aa6.9□□□□□ -1.3
HMGB3P22-202ENST00000451823 FBXO31Q5XUX0 539 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P22-202ENST00000451823 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.3
HMGB3P22-202ENST00000451823 LRRN4Q8WUT4 740 aa6.9□□□□□ -1.3
HMGB3P22-202ENST00000451823 C1QTNF2Q9BXJ5 285 aa6.9□□□□□ -1.3
HMGB3P22-202ENST00000451823 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P22-202ENST00000451823 FSHRP23945 695 aa6.88□□□□□ -1.31
HMGB3P22-202ENST00000451823 NR6A1Q15406 480 aa6.88□□□□□ -1.31
HMGB3P22-202ENST00000451823 ERFEQ4G0M1 354 aa6.88□□□□□ -1.31
HMGB3P22-202ENST00000451823 PDXDC2PQ6P474 469 aa6.88□□□□□ -1.31
HMGB3P22-202ENST00000451823 TRMT44Q8IYL2 757 aaKnown RBP6.88□□□□□ -1.31
HMGB3P22-202ENST00000451823 FAM117AQ9C073 453 aa6.88□□□□□ -1.31
HMGB3P22-202ENST00000451823 GPBP1L1Q9HC44 474 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P22-202ENST00000451823 EMILIN1Q9Y6C2 1016 aa6.88□□□□□ -1.31
HMGB3P22-202ENST00000451823 FAM181BA6NEQ2 426 aa6.87□□□□□ -1.31
HMGB3P22-202ENST00000451823 CCDC116Q8IYX3 515 aa6.87□□□□□ -1.31
HMGB3P22-202ENST00000451823 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
HMGB3P22-202ENST00000451823 GPKOWQ92917 476 aaPredicted RBP eCLIP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms