RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 NUTM2GQ5VZR2 741 aa21.99■■□□□ 1.11
TOP3B-211ENST00000449704 NGLY1Q96IV0 654 aa21.99■■□□□ 1.11
TOP3B-211ENST00000449704 HSPA5P11021 654 aaKnown RBP21.98■■□□□ 1.11
TOP3B-211ENST00000449704 ZNF692Q9BU19 519 aaPredicted RBP21.98■■□□□ 1.11
TOP3B-211ENST00000449704 SLC12A5Q9H2X9 1139 aa21.98■■□□□ 1.11
TOP3B-211ENST00000449704 ABTB2Q8N961 1025 aa21.97■■□□□ 1.11
TOP3B-211ENST00000449704 AFF2P51816 1311 aa21.96■■□□□ 1.11
TOP3B-211ENST00000449704 CDCA8Q53HL2 280 aa21.95■■□□□ 1.1
TOP3B-211ENST00000449704 COL22A1Q8NFW1 1626 aaPredicted RBP21.95■■□□□ 1.1
TOP3B-211ENST00000449704 ZNF772Q68DY9 489 aaPredicted RBP21.94■■□□□ 1.1
TOP3B-211ENST00000449704 POTEAQ6S8J7 498 aa21.94■■□□□ 1.1
TOP3B-211ENST00000449704 HDGFL2Q7Z4V5 671 aaPredicted RBP21.94■■□□□ 1.1
TOP3B-211ENST00000449704 USP6P35125 1406 aa21.94■■□□□ 1.1
TOP3B-211ENST00000449704 BRD4O60885 1362 aaPredicted RBP21.93■■□□□ 1.1
TOP3B-211ENST00000449704 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
TOP3B-211ENST00000449704 TRPM3Q9HCF6 1732 aaPredicted RBP21.93■■□□□ 1.1
TOP3B-211ENST00000449704 TERF2IPQ9NYB0 399 aa21.92■■□□□ 1.1
TOP3B-211ENST00000449704 POLR3GLQ9BT43 218 aa21.91■■□□□ 1.1
TOP3B-211ENST00000449704 CPSF1Q10570 1443 aaKnown RBP21.9■■□□□ 1.1
TOP3B-211ENST00000449704 TTC21BQ7Z4L5 1316 aa21.9■■□□□ 1.1
TOP3B-211ENST00000449704 NLRP6P59044 892 aa21.9■■□□□ 1.1
TOP3B-211ENST00000449704 NLRP13Q86W25 1043 aa21.9■■□□□ 1.1
TOP3B-211ENST00000449704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.89■■□□□ 1.09
TOP3B-211ENST00000449704 USP21Q9UK80 565 aa21.89■■□□□ 1.09
TOP3B-211ENST00000449704 NINLQ9Y2I6 1382 aa21.88■■□□□ 1.09
TOP3B-211ENST00000449704 SSH2Q76I76 1423 aa21.88■■□□□ 1.09
TOP3B-211ENST00000449704 FNBP4Q8N3X1 1017 aaPredicted RBP21.87■■□□□ 1.09
TOP3B-211ENST00000449704 ALS2Q96Q42 1657 aa21.87■■□□□ 1.09
TOP3B-211ENST00000449704 FAM83GA6ND36 823 aa21.86■■□□□ 1.09
TOP3B-211ENST00000449704 QTRT2Q9H974 415 aaKnown RBP21.86■■□□□ 1.09
TOP3B-211ENST00000449704 TTC21AQ8NDW8 1320 aa21.85■■□□□ 1.09
TOP3B-211ENST00000449704 CD163L1Q9NR16 1453 aa21.85■■□□□ 1.09
TOP3B-211ENST00000449704 ZC3H6P61129 1189 aaKnown RBP21.85■■□□□ 1.09
TOP3B-211ENST00000449704 A0A1W2PP64 1363 aa21.85■■□□□ 1.09
TOP3B-211ENST00000449704 PRDM11Q9NQV5 511 aa21.84■■□□□ 1.09
TOP3B-211ENST00000449704 USP19O94966 1318 aa21.83■■□□□ 1.09
TOP3B-211ENST00000449704 GCP02774 474 aa21.82■■□□□ 1.08
TOP3B-211ENST00000449704 NME9Q86XW9 330 aa21.82■■□□□ 1.08
TOP3B-211ENST00000449704 RXRBP28702 533 aa21.81■■□□□ 1.08
TOP3B-211ENST00000449704 CHRNA2Q15822 529 aa21.81■■□□□ 1.08
TOP3B-211ENST00000449704 ZRANB1Q9UGI0 708 aa21.81■■□□□ 1.08
TOP3B-211ENST00000449704 TRPC5Q9UL62 973 aaPredicted RBP21.81■■□□□ 1.08
TOP3B-211ENST00000449704 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
TOP3B-211ENST00000449704 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
TOP3B-211ENST00000449704 KIAA0232Q92628 1395 aa21.8■■□□□ 1.08
TOP3B-211ENST00000449704 UNC5CLQ8IV45 518 aa21.8■■□□□ 1.08
TOP3B-211ENST00000449704 ZBTB7CA1YPR0 619 aa21.79■■□□□ 1.08
TOP3B-211ENST00000449704 C11orf95C9JLR9 678 aaPredicted RBP21.79■■□□□ 1.08
TOP3B-211ENST00000449704 SOX12O15370 315 aa21.79■■□□□ 1.08
TOP3B-211ENST00000449704 BCL9LQ86UU0 1499 aa21.78■■□□□ 1.08
TOP3B-211ENST00000449704 BTG4Q9NY30 223 aa21.78■■□□□ 1.08
TOP3B-211ENST00000449704 AKAP12Q02952 1782 aa21.77■■□□□ 1.08
TOP3B-211ENST00000449704 SLIT2O94813 1529 aa21.77■■□□□ 1.08
TOP3B-211ENST00000449704 RBM6P78332 1123 aaKnown RBP21.77■■□□□ 1.08
TOP3B-211ENST00000449704 ABCA3Q99758 1704 aa21.75■■□□□ 1.07
TOP3B-211ENST00000449704 KCNH5Q8NCM2 988 aa21.75■■□□□ 1.07
TOP3B-211ENST00000449704 CCDC9Q9Y3X0 531 aaKnown RBP21.75■■□□□ 1.07
TOP3B-211ENST00000449704 USP31Q70CQ4 1352 aa21.74■■□□□ 1.07
TOP3B-211ENST00000449704 ATRNO75882 1429 aa21.73■■□□□ 1.07
TOP3B-211ENST00000449704 PIK3C2AO00443 1686 aa21.73■■□□□ 1.07
TOP3B-211ENST00000449704 CARD14Q9BXL6 1004 aa21.73■■□□□ 1.07
TOP3B-211ENST00000449704 CPDO75976 1380 aa21.73■■□□□ 1.07
TOP3B-211ENST00000449704 MON2Q7Z3U7 1717 aa21.72■■□□□ 1.07
TOP3B-211ENST00000449704 GJD4Q96KN9 370 aaPredicted RBP21.72■■□□□ 1.07
TOP3B-211ENST00000449704 NRKQ7Z2Y5 1582 aa21.72■■□□□ 1.07
TOP3B-211ENST00000449704 MARF1Q9Y4F3 1742 aaKnown RBP21.72■■□□□ 1.07
TOP3B-211ENST00000449704 VPS72Q15906 364 aa21.71■■□□□ 1.07
TOP3B-211ENST00000449704 COG3Q96JB2 828 aa21.71■■□□□ 1.07
TOP3B-211ENST00000449704 STRN4Q9NRL3 753 aa21.71■■□□□ 1.07
TOP3B-211ENST00000449704 PHRF1Q9P1Y6 1649 aaKnown RBP21.7■■□□□ 1.06
TOP3B-211ENST00000449704 CRYBG1Q9Y4K1 1723 aa21.7■■□□□ 1.06
TOP3B-211ENST00000449704 EVA1CP58658 441 aa21.7■■□□□ 1.06
TOP3B-211ENST00000449704 GGNBP2Q9H3C7 697 aa21.7■■□□□ 1.06
TOP3B-211ENST00000449704 KIF7Q2M1P5 1343 aa21.7■■□□□ 1.06
TOP3B-211ENST00000449704 SLIT3O75094 1523 aa21.7■■□□□ 1.06
TOP3B-211ENST00000449704 FYB1O15117 783 aa21.69■■□□□ 1.06
TOP3B-211ENST00000449704 ARHGEF25Q86VW2 580 aa21.69■■□□□ 1.06
TOP3B-211ENST00000449704 PANK3Q9H999 370 aa21.69■■□□□ 1.06
TOP3B-211ENST00000449704 NSD3Q9BZ95 1437 aa21.69■■□□□ 1.06
TOP3B-211ENST00000449704 COL14A1Q05707 1796 aaKnown RBP21.67■■□□□ 1.06
TOP3B-211ENST00000449704 OVOS2A0A0J9YW53 1432 aa21.65■■□□□ 1.06
TOP3B-211ENST00000449704 OVOS2Q6IE36 1432 aa21.65■■□□□ 1.06
TOP3B-211ENST00000449704 AATKQ6ZMQ8 1374 aa21.65■■□□□ 1.06
TOP3B-211ENST00000449704 PLCH1Q4KWH8 1693 aa21.64■■□□□ 1.05
TOP3B-211ENST00000449704 MYOM1P52179 1685 aa21.63■■□□□ 1.05
TOP3B-211ENST00000449704 LARP1Q6PKG0 1096 aaKnown RBP21.63■■□□□ 1.05
TOP3B-211ENST00000449704 AXIN2Q9Y2T1 843 aa21.63■■□□□ 1.05
TOP3B-211ENST00000449704 CGNL1Q0VF96 1302 aa21.62■■□□□ 1.05
TOP3B-211ENST00000449704 SPATA31A5Q5VU36 1347 aa21.62■■□□□ 1.05
TOP3B-211ENST00000449704 SPATA31A7Q8IWB4 1347 aa21.62■■□□□ 1.05
TOP3B-211ENST00000449704 FBLN1P23142 703 aa21.62■■□□□ 1.05
TOP3B-211ENST00000449704 USP35Q9P2H5 1018 aa21.62■■□□□ 1.05
TOP3B-211ENST00000449704 CDK12Q9NYV4 1490 aaPredicted RBP21.62■■□□□ 1.05
TOP3B-211ENST00000449704 CAMTA1Q9Y6Y1 1673 aa21.62■■□□□ 1.05
TOP3B-211ENST00000449704 NFAT5O94916 1531 aa21.61■■□□□ 1.05
TOP3B-211ENST00000449704 NWD2Q9ULI1 1742 aa21.61■■□□□ 1.05
TOP3B-211ENST00000449704 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
TOP3B-211ENST00000449704 RGS12O14924 1447 aa21.61■■□□□ 1.05
TOP3B-211ENST00000449704 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
TOP3B-211ENST00000449704 WASHC2AQ641Q2 1341 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms