RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 TRPM3Q9HCF6 1732 aaPredicted RBP20.84■□□□□ 0.93
SHANK2-209ENST00000445654 ALS2Q96Q42 1657 aa20.84■□□□□ 0.93
SHANK2-209ENST00000445654 FAM182BQ5T319 152 aa20.84■□□□□ 0.93
SHANK2-209ENST00000445654 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
SHANK2-209ENST00000445654 C14orf93Q9H972 538 aaKnown RBP20.84■□□□□ 0.93
SHANK2-209ENST00000445654 APBA3O96018 575 aa20.83■□□□□ 0.93
SHANK2-209ENST00000445654 PPP1R1BQ9UD71 204 aaPredicted RBP20.83■□□□□ 0.93
SHANK2-209ENST00000445654 PRAM1Q96QH2 718 aa20.82■□□□□ 0.92
SHANK2-209ENST00000445654 PRDM11Q9NQV5 511 aa20.82■□□□□ 0.92
SHANK2-209ENST00000445654 POGKQ9P215 609 aa20.82■□□□□ 0.92
SHANK2-209ENST00000445654 TRIM37O94972 964 aa20.81■□□□□ 0.92
SHANK2-209ENST00000445654 DLC1Q96QB1 1528 aa20.81■□□□□ 0.92
SHANK2-209ENST00000445654 NINLQ9Y2I6 1382 aa20.8■□□□□ 0.92
SHANK2-209ENST00000445654 RREB1Q92766 1687 aa20.8■□□□□ 0.92
SHANK2-209ENST00000445654 SPATA31A1Q5TZJ5 1347 aa20.79■□□□□ 0.92
SHANK2-209ENST00000445654 ACIN1Q9UKV3 1341 aaKnown RBP20.79■□□□□ 0.92
SHANK2-209ENST00000445654 SPON1Q9HCB6 807 aa20.79■□□□□ 0.92
SHANK2-209ENST00000445654 SAFB2Q14151 953 aaKnown RBP eCLIP20.78■□□□□ 0.92
SHANK2-209ENST00000445654 C11orf95C9JLR9 678 aaPredicted RBP20.77■□□□□ 0.92
SHANK2-209ENST00000445654 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
SHANK2-209ENST00000445654 CRYBG1Q9Y4K1 1723 aa20.76■□□□□ 0.91
SHANK2-209ENST00000445654 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
SHANK2-209ENST00000445654 NUP188Q5SRE5 1749 aa20.75■□□□□ 0.91
SHANK2-209ENST00000445654 TULP4Q9NRJ4 1543 aa20.74■□□□□ 0.91
SHANK2-209ENST00000445654 KCNQ2O43526 872 aa20.74■□□□□ 0.91
SHANK2-209ENST00000445654 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
SHANK2-209ENST00000445654 CFAP70Q5T0N1 1121 aa20.74■□□□□ 0.91
SHANK2-209ENST00000445654 NGDNQ8NEJ9 315 aaKnown RBP20.74■□□□□ 0.91
SHANK2-209ENST00000445654 BARGINQ6ZT62 677 aa20.73■□□□□ 0.91
SHANK2-209ENST00000445654 MPHOSPH9Q99550 1183 aa20.72■□□□□ 0.91
SHANK2-209ENST00000445654 STRN4Q9NRL3 753 aa20.72■□□□□ 0.91
SHANK2-209ENST00000445654 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
SHANK2-209ENST00000445654 ATP7BP35670 1465 aa20.7■□□□□ 0.9
SHANK2-209ENST00000445654 EVA1CP58658 441 aa20.7■□□□□ 0.9
SHANK2-209ENST00000445654 ITSN1Q15811 1721 aa20.69■□□□□ 0.9
SHANK2-209ENST00000445654 PHRF1Q9P1Y6 1649 aaKnown RBP20.68■□□□□ 0.9
SHANK2-209ENST00000445654 WASLO00401 505 aaPredicted RBP20.68■□□□□ 0.9
SHANK2-209ENST00000445654 THRAP3Q9Y2W1 955 aaKnown RBP20.67■□□□□ 0.9
SHANK2-209ENST00000445654 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
SHANK2-209ENST00000445654 PRR36Q9H6K5 1346 aa20.66■□□□□ 0.9
SHANK2-209ENST00000445654 SSH2Q76I76 1423 aa20.66■□□□□ 0.9
SHANK2-209ENST00000445654 MINK1Q8N4C8 1332 aaPredicted RBP20.65■□□□□ 0.9
SHANK2-209ENST00000445654 CHRNA2Q15822 529 aa20.65■□□□□ 0.9
SHANK2-209ENST00000445654 TCP11L2Q8N4U5 519 aa20.65■□□□□ 0.9
SHANK2-209ENST00000445654 USP35Q9P2H5 1018 aa20.65■□□□□ 0.9
SHANK2-209ENST00000445654 RGPD3A6NKT7 1758 aaPredicted RBP20.64■□□□□ 0.9
SHANK2-209ENST00000445654 RGPD4Q7Z3J3 1758 aa20.64■□□□□ 0.9
SHANK2-209ENST00000445654 TRAK1Q9UPV9 953 aa20.64■□□□□ 0.89
SHANK2-209ENST00000445654 ADGRB1O14514 1584 aa20.63■□□□□ 0.89
SHANK2-209ENST00000445654 ZC3H6P61129 1189 aaKnown RBP20.62■□□□□ 0.89
SHANK2-209ENST00000445654 PLSCR1O15162 318 aa20.6■□□□□ 0.89
SHANK2-209ENST00000445654 PARP4Q9UKK3 1724 aaKnown RBP20.6■□□□□ 0.89
SHANK2-209ENST00000445654 CPDO75976 1380 aa20.59■□□□□ 0.89
SHANK2-209ENST00000445654 OVOS2A0A0G2JMS6 1433 aa20.59■□□□□ 0.89
SHANK2-209ENST00000445654 OVOS2A0A0J9YW53 1432 aa20.59■□□□□ 0.89
SHANK2-209ENST00000445654 OVOS2Q6IE36 1432 aa20.59■□□□□ 0.89
SHANK2-209ENST00000445654 STAC3Q96MF2 364 aa20.58■□□□□ 0.89
SHANK2-209ENST00000445654 LARP1Q6PKG0 1096 aaKnown RBP20.57■□□□□ 0.88
SHANK2-209ENST00000445654 NUDT16Q96DE0 195 aaKnown RBP20.57■□□□□ 0.88
SHANK2-209ENST00000445654 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
SHANK2-209ENST00000445654 NRKQ7Z2Y5 1582 aa20.55■□□□□ 0.88
SHANK2-209ENST00000445654 LMO7Q8WWI1 1683 aa20.55■□□□□ 0.88
SHANK2-209ENST00000445654 CASZ1Q86V15 1759 aa20.55■□□□□ 0.88
SHANK2-209ENST00000445654 ZNF784Q8NCA9 323 aaPredicted RBP20.55■□□□□ 0.88
SHANK2-209ENST00000445654 POLR3AO14802 1390 aaPredicted RBP20.54■□□□□ 0.88
SHANK2-209ENST00000445654 SENP3-EIF4A1A0A087X0R7 540 aa20.52■□□□□ 0.88
SHANK2-209ENST00000445654 NUTM2GQ5VZR2 741 aa20.52■□□□□ 0.88
SHANK2-209ENST00000445654 NLRP13Q86W25 1043 aa20.52■□□□□ 0.88
SHANK2-209ENST00000445654 ABTB2Q8N961 1025 aa20.52■□□□□ 0.88
SHANK2-209ENST00000445654 CRB1P82279 1406 aa20.52■□□□□ 0.87
SHANK2-209ENST00000445654 PEAK1Q9H792 1746 aa20.51■□□□□ 0.87
SHANK2-209ENST00000445654 BCL11BQ9C0K0 894 aaPredicted RBP20.51■□□□□ 0.87
SHANK2-209ENST00000445654 CCDC61Q9Y6R9 512 aa20.51■□□□□ 0.87
SHANK2-209ENST00000445654 USP19O94966 1318 aa20.51■□□□□ 0.87
SHANK2-209ENST00000445654 ACEP12821 1306 aa20.51■□□□□ 0.87
SHANK2-209ENST00000445654 SBF2Q86WG5 1849 aa20.5■□□□□ 0.87
SHANK2-209ENST00000445654 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
SHANK2-209ENST00000445654 BRD4O60885 1362 aaPredicted RBP20.49■□□□□ 0.87
SHANK2-209ENST00000445654 DDB1Q16531 1140 aa20.49■□□□□ 0.87
SHANK2-209ENST00000445654 ARHGEF28Q8N1W1 1705 aaKnown RBP20.49■□□□□ 0.87
SHANK2-209ENST00000445654 CHD4Q14839 1912 aa20.49■□□□□ 0.87
SHANK2-209ENST00000445654 TOPAZ1Q8N9V7 1692 aa20.48■□□□□ 0.87
SHANK2-209ENST00000445654 PLEKHG3A1L390 1219 aa20.48■□□□□ 0.87
SHANK2-209ENST00000445654 C1QTNF8P60827 252 aa20.48■□□□□ 0.87
SHANK2-209ENST00000445654 GCP02774 474 aa20.47■□□□□ 0.87
SHANK2-209ENST00000445654 CDCA7Q9BWT1 371 aaPredicted RBP20.47■□□□□ 0.87
SHANK2-209ENST00000445654 ANO8Q9HCE9 1232 aaPredicted RBP20.47■□□□□ 0.87
SHANK2-209ENST00000445654 STK32BQ9NY57 414 aa20.47■□□□□ 0.87
SHANK2-209ENST00000445654 MYOM1P52179 1685 aa20.47■□□□□ 0.87
SHANK2-209ENST00000445654 BCL9O00512 1426 aa20.46■□□□□ 0.87
SHANK2-209ENST00000445654 ZBTB7AO95365 584 aa20.46■□□□□ 0.87
SHANK2-209ENST00000445654 CDK19Q9BWU1 502 aa20.46■□□□□ 0.87
SHANK2-209ENST00000445654 PTGER2P43116 358 aa20.45■□□□□ 0.86
SHANK2-209ENST00000445654 LRRC37A3O60309 1634 aa20.45■□□□□ 0.86
SHANK2-209ENST00000445654 IFFO2Q5TF58 517 aa20.44■□□□□ 0.86
SHANK2-209ENST00000445654 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
SHANK2-209ENST00000445654 SYT17Q9BSW7 474 aa20.44■□□□□ 0.86
SHANK2-209ENST00000445654 KDM2AQ9Y2K7 1162 aa20.44■□□□□ 0.86
SHANK2-209ENST00000445654 FHDC1Q9C0D6 1143 aaPredicted RBP20.43■□□□□ 0.86
SHANK2-209ENST00000445654 MTFR1LQ9H019 292 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms