RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 POTEAQ6S8J7 498 aa25.43■■□□□ 1.66
LRCH1-204ENST00000443945 SLC12A5Q9H2X9 1139 aa25.43■■□□□ 1.66
LRCH1-204ENST00000443945 NGLY1Q96IV0 654 aa25.42■■□□□ 1.66
LRCH1-204ENST00000443945 AFF2P51816 1311 aa25.42■■□□□ 1.66
LRCH1-204ENST00000443945 USP6P35125 1406 aa25.42■■□□□ 1.66
LRCH1-204ENST00000443945 HSPA5P11021 654 aaKnown RBP25.4■■□□□ 1.66
LRCH1-204ENST00000443945 TMF1P82094 1093 aa25.4■■□□□ 1.66
LRCH1-204ENST00000443945 ABCA3Q99758 1704 aa25.4■■□□□ 1.66
LRCH1-204ENST00000443945 ABTB2Q8N961 1025 aa25.39■■□□□ 1.65
LRCH1-204ENST00000443945 EIF4G2P78344 907 aaKnown RBP eCLIP25.38■■□□□ 1.651e-6■■■□□ 16.6
LRCH1-204ENST00000443945 CD163L1Q9NR16 1453 aa25.37■■□□□ 1.65
LRCH1-204ENST00000443945 CPSF1Q10570 1443 aaKnown RBP25.37■■□□□ 1.65
LRCH1-204ENST00000443945 AKAP12Q02952 1782 aa25.36■■□□□ 1.65
LRCH1-204ENST00000443945 KTN1Q86UP2 1357 aaKnown RBP25.35■■□□□ 1.65
LRCH1-204ENST00000443945 MARF1Q9Y4F3 1742 aaKnown RBP25.35■■□□□ 1.65
LRCH1-204ENST00000443945 SSH2Q76I76 1423 aa25.34■■□□□ 1.65
LRCH1-204ENST00000443945 CRYBG1Q9Y4K1 1723 aa25.33■■□□□ 1.65
LRCH1-204ENST00000443945 ZNF772Q68DY9 489 aaPredicted RBP25.33■■□□□ 1.65
LRCH1-204ENST00000443945 ZNF692Q9BU19 519 aaPredicted RBP25.33■■□□□ 1.65
LRCH1-204ENST00000443945 TTC21BQ7Z4L5 1316 aa25.32■■□□□ 1.64
LRCH1-204ENST00000443945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.32■■□□□ 1.642e-7■□□□□ 10
LRCH1-204ENST00000443945 PUS7Q96PZ0 661 aaKnown RBP25.32■■□□□ 1.64
LRCH1-204ENST00000443945 POLR3GLQ9BT43 218 aa25.32■■□□□ 1.64
LRCH1-204ENST00000443945 A0A1W2PP64 1363 aa25.32■■□□□ 1.64
LRCH1-204ENST00000443945 USP21Q9UK80 565 aa25.32■■□□□ 1.64
LRCH1-204ENST00000443945 PIK3C2AO00443 1686 aa25.3■■□□□ 1.64
LRCH1-204ENST00000443945 NRKQ7Z2Y5 1582 aa25.3■■□□□ 1.64
LRCH1-204ENST00000443945 NLRP6P59044 892 aa25.3■■□□□ 1.64
LRCH1-204ENST00000443945 MON2Q7Z3U7 1717 aa25.3■■□□□ 1.64
LRCH1-204ENST00000443945 PHRF1Q9P1Y6 1649 aaKnown RBP25.29■■□□□ 1.64
LRCH1-204ENST00000443945 HDGFL2Q7Z4V5 671 aaPredicted RBP25.29■■□□□ 1.64
LRCH1-204ENST00000443945 FNBP4Q8N3X1 1017 aaPredicted RBP25.29■■□□□ 1.64
LRCH1-204ENST00000443945 FAM83GA6ND36 823 aa25.28■■□□□ 1.64
LRCH1-204ENST00000443945 ZC3H6P61129 1189 aaKnown RBP25.28■■□□□ 1.64
LRCH1-204ENST00000443945 TERF2IPQ9NYB0 399 aa25.28■■□□□ 1.64
LRCH1-204ENST00000443945 ZRANB1Q9UGI0 708 aa25.28■■□□□ 1.64
LRCH1-204ENST00000443945 NLRP13Q86W25 1043 aa25.27■■□□□ 1.64
LRCH1-204ENST00000443945 QTRT2Q9H974 415 aaKnown RBP25.27■■□□□ 1.64
LRCH1-204ENST00000443945 BCL9LQ86UU0 1499 aa25.27■■□□□ 1.64
LRCH1-204ENST00000443945 BRD4O60885 1362 aaPredicted RBP25.27■■□□□ 1.64
LRCH1-204ENST00000443945 CDCA8Q53HL2 280 aa25.25■■□□□ 1.63
LRCH1-204ENST00000443945 NME9Q86XW9 330 aa25.25■■□□□ 1.63
LRCH1-204ENST00000443945 USP19O94966 1318 aa25.25■■□□□ 1.63
LRCH1-204ENST00000443945 KIAA0232Q92628 1395 aa25.25■■□□□ 1.63
LRCH1-204ENST00000443945 SOX12O15370 315 aa25.25■■□□□ 1.63
LRCH1-204ENST00000443945 CHRNA2Q15822 529 aa25.25■■□□□ 1.63
LRCH1-204ENST00000443945 SLIT2O94813 1529 aa25.24■■□□□ 1.63
LRCH1-204ENST00000443945 C11orf95C9JLR9 678 aaPredicted RBP25.24■■□□□ 1.63
LRCH1-204ENST00000443945 PRDM11Q9NQV5 511 aa25.24■■□□□ 1.63
LRCH1-204ENST00000443945 NINLQ9Y2I6 1382 aa25.24■■□□□ 1.63
LRCH1-204ENST00000443945 PLCH1Q4KWH8 1693 aa25.23■■□□□ 1.63
LRCH1-204ENST00000443945 MYOM1P52179 1685 aa25.23■■□□□ 1.63
LRCH1-204ENST00000443945 TTC21AQ8NDW8 1320 aa25.22■■□□□ 1.63
LRCH1-204ENST00000443945 GCP02774 474 aa25.22■■□□□ 1.63
LRCH1-204ENST00000443945 ZBTB7CA1YPR0 619 aa25.22■■□□□ 1.63
LRCH1-204ENST00000443945 EDC4Q6P2E9 1401 aaKnown RBP25.21■■□□□ 1.63
LRCH1-204ENST00000443945 BTG4Q9NY30 223 aa25.21■■□□□ 1.63
LRCH1-204ENST00000443945 ANKRD36BQ8N2N9 1353 aa25.21■■□□□ 1.63
LRCH1-204ENST00000443945 RXRBP28702 533 aa25.21■■□□□ 1.63
LRCH1-204ENST00000443945 UNC5CLQ8IV45 518 aa25.2■■□□□ 1.62
LRCH1-204ENST00000443945 TRPC5Q9UL62 973 aaPredicted RBP25.19■■□□□ 1.62
LRCH1-204ENST00000443945 ATRNO75882 1429 aa25.18■■□□□ 1.62
LRCH1-204ENST00000443945 COL14A1Q05707 1796 aaKnown RBP25.17■■□□□ 1.62
LRCH1-204ENST00000443945 SLIT3O75094 1523 aa25.17■■□□□ 1.62
LRCH1-204ENST00000443945 RBM6P78332 1123 aaKnown RBP25.15■■□□□ 1.62
LRCH1-204ENST00000443945 CARD14Q9BXL6 1004 aa25.14■■□□□ 1.62
LRCH1-204ENST00000443945 CCDC9Q9Y3X0 531 aaKnown RBP25.14■■□□□ 1.62
LRCH1-204ENST00000443945 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.14■■□□□ 1.61
LRCH1-204ENST00000443945 NWD2Q9ULI1 1742 aa25.14■■□□□ 1.61
LRCH1-204ENST00000443945 NRAPQ86VF7 1730 aa25.12■■□□□ 1.61
LRCH1-204ENST00000443945 CPDO75976 1380 aa25.12■■□□□ 1.61
LRCH1-204ENST00000443945 GJD4Q96KN9 370 aaPredicted RBP25.12■■□□□ 1.61
LRCH1-204ENST00000443945 STRN4Q9NRL3 753 aa25.12■■□□□ 1.61
LRCH1-204ENST00000443945 USP31Q70CQ4 1352 aa25.12■■□□□ 1.61
LRCH1-204ENST00000443945 RGS12O14924 1447 aa25.1■■□□□ 1.61
LRCH1-204ENST00000443945 KIF7Q2M1P5 1343 aa25.1■■□□□ 1.61
LRCH1-204ENST00000443945 CAMTA1Q9Y6Y1 1673 aa25.1■■□□□ 1.61
LRCH1-204ENST00000443945 NSD3Q9BZ95 1437 aa25.1■■□□□ 1.61
LRCH1-204ENST00000443945 GGNBP2Q9H3C7 697 aa25.09■■□□□ 1.61
LRCH1-204ENST00000443945 OVOS2A0A0J9YW53 1432 aa25.09■■□□□ 1.61
LRCH1-204ENST00000443945 OVOS2Q6IE36 1432 aa25.09■■□□□ 1.61
LRCH1-204ENST00000443945 NFAT5O94916 1531 aa25.09■■□□□ 1.61
LRCH1-204ENST00000443945 GLI3P10071 1580 aa25.09■■□□□ 1.61
LRCH1-204ENST00000443945 FBLN1P23142 703 aa25.09■■□□□ 1.61
LRCH1-204ENST00000443945 VPS72Q15906 364 aa25.09■■□□□ 1.61
LRCH1-204ENST00000443945 KCNH5Q8NCM2 988 aa25.08■■□□□ 1.61
LRCH1-204ENST00000443945 FYB1O15117 783 aa25.08■■□□□ 1.6
LRCH1-204ENST00000443945 LMO7Q8WWI1 1683 aa25.07■■□□□ 1.6
LRCH1-204ENST00000443945 SOCS7O14512 581 aa25.06■■□□□ 1.6
LRCH1-204ENST00000443945 ZEB1P37275 1124 aaPredicted RBP25.06■■□□□ 1.6
LRCH1-204ENST00000443945 ARHGEF25Q86VW2 580 aa25.06■■□□□ 1.6
LRCH1-204ENST00000443945 AXIN2Q9Y2T1 843 aa25.06■■□□□ 1.6
LRCH1-204ENST00000443945 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
LRCH1-204ENST00000443945 COG3Q96JB2 828 aa25.06■■□□□ 1.6
LRCH1-204ENST00000443945 PANK3Q9H999 370 aa25.06■■□□□ 1.6
LRCH1-204ENST00000443945 USP35Q9P2H5 1018 aa25.05■■□□□ 1.6
LRCH1-204ENST00000443945 EP400Q96L91 3159 aa25.05■■□□□ 1.6
LRCH1-204ENST00000443945 EVA1CP58658 441 aa25.04■■□□□ 1.6
LRCH1-204ENST00000443945 CDK12Q9NYV4 1490 aaPredicted RBP25.03■■□□□ 1.6
LRCH1-204ENST00000443945 LARP1Q6PKG0 1096 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms