RNA–Protein interactions for RNA: ENST00000441383.5

GACAT1-202, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-202ENST00000441383 CTHP32929 405 aa11.48□□□□□ -0.57
GACAT1-202ENST00000441383 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
GACAT1-202ENST00000441383 ZBTB3Q9H5J0 574 aa11.48□□□□□ -0.57
GACAT1-202ENST00000441383 BMP1P13497 986 aa11.47□□□□□ -0.57
GACAT1-202ENST00000441383 SLC24A3Q9HC58 644 aa11.47□□□□□ -0.57
GACAT1-202ENST00000441383 CAPN5O15484 640 aaPredicted RBP11.46□□□□□ -0.57
GACAT1-202ENST00000441383 MAP10Q9P2G4 905 aa11.46□□□□□ -0.57
GACAT1-202ENST00000441383 LIMD1Q9UGP4 676 aa11.46□□□□□ -0.57
GACAT1-202ENST00000441383 VARSP26640 1264 aaKnown RBP11.45□□□□□ -0.58
GACAT1-202ENST00000441383 LCE2CQ5TA81 110 aa11.45□□□□□ -0.58
GACAT1-202ENST00000441383 PRPF38BQ5VTL8 546 aaKnown RBP11.45□□□□□ -0.58
GACAT1-202ENST00000441383 MYSM1Q5VVJ2 828 aa11.45□□□□□ -0.58
GACAT1-202ENST00000441383 TRIM46Q7Z4K8 759 aa11.45□□□□□ -0.58
GACAT1-202ENST00000441383 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
GACAT1-202ENST00000441383 F12P00748 615 aaPredicted RBP11.44□□□□□ -0.58
GACAT1-202ENST00000441383 KIFC2Q96AC6 838 aa11.44□□□□□ -0.58
GACAT1-202ENST00000441383 QPCTQ16769 361 aa11.43□□□□□ -0.58
GACAT1-202ENST00000441383 FOXJ1Q92949 421 aa11.42□□□□□ -0.58
GACAT1-202ENST00000441383 TERTO14746 1132 aaKnown RBP11.41□□□□□ -0.58
GACAT1-202ENST00000441383 NNTQ13423 1086 aa11.41□□□□□ -0.58
GACAT1-202ENST00000441383 MPNDQ8N594 471 aa11.4□□□□□ -0.58
GACAT1-202ENST00000441383 TSC1Q92574 1164 aa11.4□□□□□ -0.58
GACAT1-202ENST00000441383 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
GACAT1-202ENST00000441383 LILRB3O75022 631 aa11.39□□□□□ -0.59
GACAT1-202ENST00000441383 NUTM2BA6NNL0 878 aaPredicted RBP11.38□□□□□ -0.59
GACAT1-202ENST00000441383 NUTM2EB1AL46 878 aaPredicted RBP11.38□□□□□ -0.59
GACAT1-202ENST00000441383 NUTM2DQ5VT03 806 aaPredicted RBP11.38□□□□□ -0.59
GACAT1-202ENST00000441383 NUTM2AQ8IVF1 878 aaPredicted RBP11.38□□□□□ -0.59
GACAT1-202ENST00000441383 TUSC1Q2TAM9 212 aa11.37□□□□□ -0.59
GACAT1-202ENST00000441383 C4orf48Q5BLP8 95 aa11.37□□□□□ -0.59
GACAT1-202ENST00000441383 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
GACAT1-202ENST00000441383 FAM174AQ8TBP5 190 aa11.36□□□□□ -0.59
GACAT1-202ENST00000441383 WIPF1O43516 503 aa11.35□□□□□ -0.59
GACAT1-202ENST00000441383 TIMP2P16035 220 aa11.35□□□□□ -0.59
GACAT1-202ENST00000441383 ZFP42Q96MM3 310 aa11.35□□□□□ -0.59
GACAT1-202ENST00000441383 KLF16Q9BXK1 252 aaPredicted RBP11.35□□□□□ -0.59
GACAT1-202ENST00000441383 ADH1CP00326 375 aa11.34□□□□□ -0.59
GACAT1-202ENST00000441383 ARID5BQ14865 1188 aa11.34□□□□□ -0.59
GACAT1-202ENST00000441383 CDK15Q96Q40 435 aa11.34□□□□□ -0.59
GACAT1-202ENST00000441383 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
GACAT1-202ENST00000441383 WDR4P57081 412 aaKnown RBP11.33□□□□□ -0.6
GACAT1-202ENST00000441383 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
GACAT1-202ENST00000441383 AGERQ15109 404 aa11.32□□□□□ -0.6
GACAT1-202ENST00000441383 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
GACAT1-202ENST00000441383 NR3C2P08235 984 aa11.3□□□□□ -0.6
GACAT1-202ENST00000441383 MRPL14Q6P1L8 145 aaKnown RBP11.3□□□□□ -0.6
GACAT1-202ENST00000441383 BPHLQ86WA6 291 aaPredicted RBP11.3□□□□□ -0.6
GACAT1-202ENST00000441383 GRM5P41594 1212 aa11.29□□□□□ -0.6
GACAT1-202ENST00000441383 VEGFBP49765 207 aa11.29□□□□□ -0.6
GACAT1-202ENST00000441383 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
GACAT1-202ENST00000441383 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
GACAT1-202ENST00000441383 ITPKCQ96DU7 683 aa11.28□□□□□ -0.6
GACAT1-202ENST00000441383 ZFAND3Q9H8U3 227 aa11.28□□□□□ -0.6
GACAT1-202ENST00000441383 ZIC2O95409 532 aaPredicted RBP11.27□□□□□ -0.61
GACAT1-202ENST00000441383 SH3RF1Q7Z6J0 888 aa11.27□□□□□ -0.61
GACAT1-202ENST00000441383 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
GACAT1-202ENST00000441383 SOBPA7XYQ1 873 aa11.25□□□□□ -0.61
GACAT1-202ENST00000441383 INSM1Q01101 510 aaPredicted RBP11.25□□□□□ -0.61
GACAT1-202ENST00000441383 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
GACAT1-202ENST00000441383 NR5A1Q13285 461 aa11.25□□□□□ -0.61
GACAT1-202ENST00000441383 FBXO31Q5XUX0 539 aaPredicted RBP11.25□□□□□ -0.61
GACAT1-202ENST00000441383 ARMC2Q8NEN0 867 aa11.25□□□□□ -0.61
GACAT1-202ENST00000441383 SLC16A10Q8TF71 515 aa11.25□□□□□ -0.61
GACAT1-202ENST00000441383 C1QTNF2Q9BXJ5 285 aa11.25□□□□□ -0.61
GACAT1-202ENST00000441383 SCARF1Q14162 830 aa11.24□□□□□ -0.61
GACAT1-202ENST00000441383 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
GACAT1-202ENST00000441383 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
GACAT1-202ENST00000441383 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
GACAT1-202ENST00000441383 MAGEB6P1A0A0J9YX57 407 aa11.22□□□□□ -0.61
GACAT1-202ENST00000441383 H3BM21 787 aa11.22□□□□□ -0.61
GACAT1-202ENST00000441383 GMPRP36959 345 aa11.22□□□□□ -0.61
GACAT1-202ENST00000441383 NPAS3Q8IXF0 933 aa11.22□□□□□ -0.61
GACAT1-202ENST00000441383 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
GACAT1-202ENST00000441383 ERBB4Q15303 1308 aa11.21□□□□□ -0.61
GACAT1-202ENST00000441383 FSHRP23945 695 aa11.2□□□□□ -0.62
GACAT1-202ENST00000441383 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
GACAT1-202ENST00000441383 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
GACAT1-202ENST00000441383 LRRN4Q8WUT4 740 aa11.2□□□□□ -0.62
GACAT1-202ENST00000441383 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
GACAT1-202ENST00000441383 SKIV2LQ15477 1246 aaKnown RBP11.19□□□□□ -0.62
GACAT1-202ENST00000441383 VASH1Q7L8A9 365 aaPredicted RBP11.19□□□□□ -0.62
GACAT1-202ENST00000441383 TRMT44Q8IYL2 757 aaKnown RBP11.19□□□□□ -0.62
GACAT1-202ENST00000441383 IRF7Q92985 503 aa11.19□□□□□ -0.62
GACAT1-202ENST00000441383 FAM117AQ9C073 453 aa11.19□□□□□ -0.62
GACAT1-202ENST00000441383 KDM4CQ9H3R0 1056 aa11.19□□□□□ -0.62
GACAT1-202ENST00000441383 MAP4K5Q9Y4K4 846 aa11.19□□□□□ -0.62
GACAT1-202ENST00000441383 ERFEQ4G0M1 354 aa11.17□□□□□ -0.62
GACAT1-202ENST00000441383 MEIOBQ8N635 442 aa11.17□□□□□ -0.62
GACAT1-202ENST00000441383 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
GACAT1-202ENST00000441383 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
GACAT1-202ENST00000441383 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
GACAT1-202ENST00000441383 LORP23490 312 aaPredicted RBP11.15□□□□□ -0.62
GACAT1-202ENST00000441383 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
GACAT1-202ENST00000441383 BMP2P12643 396 aa11.14□□□□□ -0.63
GACAT1-202ENST00000441383 NR6A1Q15406 480 aa11.14□□□□□ -0.63
GACAT1-202ENST00000441383 MAN1A2O60476 641 aa11.13□□□□□ -0.63
GACAT1-202ENST00000441383 PDXDC2PQ6P474 469 aa11.13□□□□□ -0.63
GACAT1-202ENST00000441383 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
GACAT1-202ENST00000441383 FKBPLQ9UIM3 349 aa11.13□□□□□ -0.63
GACAT1-202ENST00000441383 PPP2R2DQ66LE6 453 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms