RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 POLR3AO14802 1390 aaPredicted RBP25.97■■□□□ 1.75
SMPD4-210ENST00000441135 PLEKHG5O94827 1062 aa25.97■■□□□ 1.75
SMPD4-210ENST00000441135 QRICH2Q9H0J4 1663 aa25.96■■□□□ 1.75
SMPD4-210ENST00000441135 PLEKHG3A1L390 1219 aa25.95■■□□□ 1.74
SMPD4-210ENST00000441135 PAK3O75914 559 aaPredicted RBP25.95■■□□□ 1.74
SMPD4-210ENST00000441135 SRPK2P78362 688 aaKnown RBP25.95■■□□□ 1.74
SMPD4-210ENST00000441135 GJD4Q96KN9 370 aaPredicted RBP25.95■■□□□ 1.74
SMPD4-210ENST00000441135 ACEP12821 1306 aa25.93■■□□□ 1.74
SMPD4-210ENST00000441135 NWD2Q9ULI1 1742 aa25.93■■□□□ 1.74
SMPD4-210ENST00000441135 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
SMPD4-210ENST00000441135 PLCH1Q4KWH8 1693 aa25.91■■□□□ 1.74
SMPD4-210ENST00000441135 PPIP5K1Q6PFW1 1433 aa25.9■■□□□ 1.74
SMPD4-210ENST00000441135 CCER1Q8TC90 406 aaPredicted RBP25.9■■□□□ 1.74
SMPD4-210ENST00000441135 CABP2Q9NPB3 220 aa25.89■■□□□ 1.74
SMPD4-210ENST00000441135 FAM83GA6ND36 823 aa25.88■■□□□ 1.73
SMPD4-210ENST00000441135 VPS72Q15906 364 aa25.88■■□□□ 1.73
SMPD4-210ENST00000441135 CRYBG1Q9Y4K1 1723 aa25.88■■□□□ 1.73
SMPD4-210ENST00000441135 EVC2Q86UK5 1308 aa25.88■■□□□ 1.73
SMPD4-210ENST00000441135 GLI3P10071 1580 aa25.87■■□□□ 1.73
SMPD4-210ENST00000441135 COL14A1Q05707 1796 aaKnown RBP25.86■■□□□ 1.73
SMPD4-210ENST00000441135 BRD4O60885 1362 aaPredicted RBP25.85■■□□□ 1.73
SMPD4-210ENST00000441135 SBNO2Q9Y2G9 1366 aa25.85■■□□□ 1.73
SMPD4-210ENST00000441135 CARD11Q9BXL7 1154 aa25.85■■□□□ 1.73
SMPD4-210ENST00000441135 PRDM11Q9NQV5 511 aa25.82■■□□□ 1.72
SMPD4-210ENST00000441135 BTG4Q9NY30 223 aa25.82■■□□□ 1.72
SMPD4-210ENST00000441135 CCDC9Q9Y3X0 531 aaKnown RBP25.82■■□□□ 1.72
SMPD4-210ENST00000441135 NRAPQ86VF7 1730 aa25.81■■□□□ 1.72
SMPD4-210ENST00000441135 PHRF1Q9P1Y6 1649 aaKnown RBP25.81■■□□□ 1.72
SMPD4-210ENST00000441135 CABP1Q9NZU7 370 aa25.8■■□□□ 1.72
SMPD4-210ENST00000441135 ABTB2Q8N961 1025 aa25.79■■□□□ 1.72
SMPD4-210ENST00000441135 KIAA0232Q92628 1395 aa25.79■■□□□ 1.72
SMPD4-210ENST00000441135 USP6P35125 1406 aa25.79■■□□□ 1.72
SMPD4-210ENST00000441135 NUTM2GQ5VZR2 741 aa25.78■■□□□ 1.72
SMPD4-210ENST00000441135 USP19O94966 1318 aa25.77■■□□□ 1.72
SMPD4-210ENST00000441135 ONECUT3O60422 494 aaPredicted RBP25.76■■□□□ 1.71
SMPD4-210ENST00000441135 NRKQ7Z2Y5 1582 aa25.75■■□□□ 1.71
SMPD4-210ENST00000441135 NLRP13Q86W25 1043 aa25.75■■□□□ 1.71
SMPD4-210ENST00000441135 SEPT12Q8IYM1 358 aa25.75■■□□□ 1.71
SMPD4-210ENST00000441135 CPDO75976 1380 aa25.73■■□□□ 1.71
SMPD4-210ENST00000441135 ZC3H6P61129 1189 aaKnown RBP25.72■■□□□ 1.71
SMPD4-210ENST00000441135 CCDC125Q86Z20 511 aa25.72■■□□□ 1.71
SMPD4-210ENST00000441135 SSH2Q76I76 1423 aa25.71■■□□□ 1.71
SMPD4-210ENST00000441135 SPATA31A5Q5VU36 1347 aa25.71■■□□□ 1.71
SMPD4-210ENST00000441135 SPATA31A7Q8IWB4 1347 aa25.71■■□□□ 1.71
SMPD4-210ENST00000441135 SLC24A1O60721 1099 aa25.71■■□□□ 1.71
SMPD4-210ENST00000441135 CHRNA2Q15822 529 aa25.7■■□□□ 1.7
SMPD4-210ENST00000441135 ZNF692Q9BU19 519 aaPredicted RBP25.7■■□□□ 1.7
SMPD4-210ENST00000441135 EP400Q96L91 3159 aa25.69■■□□□ 1.7
SMPD4-210ENST00000441135 A0A0G2JS52 829 aa25.68■■□□□ 1.7
SMPD4-210ENST00000441135 MYT1Q01538 1121 aa25.68■■□□□ 1.7
SMPD4-210ENST00000441135 FAM98CQ17RN3 349 aaKnown RBP25.68■■□□□ 1.7
SMPD4-210ENST00000441135 GCP02774 474 aa25.67■■□□□ 1.7
SMPD4-210ENST00000441135 NLRP6P59044 892 aa25.66■■□□□ 1.7
SMPD4-210ENST00000441135 KRT27Q7Z3Y8 459 aa25.66■■□□□ 1.7
SMPD4-210ENST00000441135 PUS7Q96PZ0 661 aaKnown RBP25.66■■□□□ 1.7
SMPD4-210ENST00000441135 USP47Q96K76 1375 aa25.66■■□□□ 1.7
SMPD4-210ENST00000441135 BRWD3Q6RI45 1802 aa25.65■■□□□ 1.7
SMPD4-210ENST00000441135 BLMP54132 1417 aaPredicted RBP25.65■■□□□ 1.7
SMPD4-210ENST00000441135 CPSF1Q10570 1443 aaKnown RBP25.65■■□□□ 1.7
SMPD4-210ENST00000441135 SLIT3O75094 1523 aa25.65■■□□□ 1.7
SMPD4-210ENST00000441135 STRN4Q9NRL3 753 aa25.64■■□□□ 1.7
SMPD4-210ENST00000441135 PIK3C2AO00443 1686 aa25.64■■□□□ 1.69
SMPD4-210ENST00000441135 AKAP12Q02952 1782 aa25.64■■□□□ 1.69
SMPD4-210ENST00000441135 SPATA31A1Q5TZJ5 1347 aa25.63■■□□□ 1.69
SMPD4-210ENST00000441135 TTC21BQ7Z4L5 1316 aa25.63■■□□□ 1.69
SMPD4-210ENST00000441135 TTC21AQ8NDW8 1320 aa25.63■■□□□ 1.69
SMPD4-210ENST00000441135 TESK2Q96S53 571 aa25.63■■□□□ 1.69
SMPD4-210ENST00000441135 LMO7Q8WWI1 1683 aa25.63■■□□□ 1.69
SMPD4-210ENST00000441135 KTN1Q86UP2 1357 aaKnown RBP25.62■■□□□ 1.69
SMPD4-210ENST00000441135 ST20-MTHFSA0A0A6YYL1 179 aa25.62■■□□□ 1.69
SMPD4-210ENST00000441135 THSD7AQ9UPZ6 1657 aa25.61■■□□□ 1.69
SMPD4-210ENST00000441135 CAMTA1Q9Y6Y1 1673 aa25.61■■□□□ 1.69
SMPD4-210ENST00000441135 EVA1CP58658 441 aa25.61■■□□□ 1.69
SMPD4-210ENST00000441135 AATKQ6ZMQ8 1374 aa25.58■■□□□ 1.69
SMPD4-210ENST00000441135 MON2Q7Z3U7 1717 aa25.57■■□□□ 1.68
SMPD4-210ENST00000441135 COL5A2P05997 1499 aaPredicted RBP25.56■■□□□ 1.68
SMPD4-210ENST00000441135 SF3B2Q13435 895 aaKnown RBP25.56■■□□□ 1.68
SMPD4-210ENST00000441135 KCNH5Q8NCM2 988 aa25.56■■□□□ 1.68
SMPD4-210ENST00000441135 CD163L1Q9NR16 1453 aa25.55■■□□□ 1.68
SMPD4-210ENST00000441135 LARP1Q6PKG0 1096 aaKnown RBP25.55■■□□□ 1.68
SMPD4-210ENST00000441135 BARGINQ6ZT62 677 aa25.55■■□□□ 1.68
SMPD4-210ENST00000441135 TMC1Q8TDI8 760 aa25.55■■□□□ 1.68
SMPD4-210ENST00000441135 HDGFL2Q7Z4V5 671 aaPredicted RBP25.54■■□□□ 1.68
SMPD4-210ENST00000441135 NINLQ9Y2I6 1382 aa25.54■■□□□ 1.68
SMPD4-210ENST00000441135 TCP11L2Q8N4U5 519 aa25.53■■□□□ 1.68
SMPD4-210ENST00000441135 TERF2IPQ9NYB0 399 aa25.53■■□□□ 1.68
SMPD4-210ENST00000441135 USP35Q9P2H5 1018 aa25.53■■□□□ 1.68
SMPD4-210ENST00000441135 ZBTB7CA1YPR0 619 aa25.52■■□□□ 1.68
SMPD4-210ENST00000441135 THRAP3Q9Y2W1 955 aaKnown RBP25.52■■□□□ 1.68
SMPD4-210ENST00000441135 SLC12A5Q9H2X9 1139 aa25.51■■□□□ 1.67
SMPD4-210ENST00000441135 USP31Q70CQ4 1352 aa25.51■■□□□ 1.67
SMPD4-210ENST00000441135 EDC4Q6P2E9 1401 aaKnown RBP25.51■■□□□ 1.67
SMPD4-210ENST00000441135 TMF1P82094 1093 aa25.5■■□□□ 1.67
SMPD4-210ENST00000441135 CRB1P82279 1406 aa25.5■■□□□ 1.67
SMPD4-210ENST00000441135 NFAT5O94916 1531 aa25.49■■□□□ 1.67
SMPD4-210ENST00000441135 ARHGEF25Q86VW2 580 aa25.49■■□□□ 1.67
SMPD4-210ENST00000441135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.49■■□□□ 1.67
SMPD4-210ENST00000441135 A0A1W2PP64 1363 aa25.48■■□□□ 1.67
SMPD4-210ENST00000441135 CDCA8Q53HL2 280 aa25.48■■□□□ 1.67
SMPD4-210ENST00000441135 ZRANB1Q9UGI0 708 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms