RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 TOPAZ1Q8N9V7 1692 aa22.92■■□□□ 1.26
CTSD-205ENST00000438213 COL22A1Q8NFW1 1626 aaPredicted RBP22.92■■□□□ 1.26
CTSD-205ENST00000438213 PLEKHG5O94827 1062 aa22.91■■□□□ 1.26
CTSD-205ENST00000438213 ABTB2Q8N961 1025 aa22.9■■□□□ 1.26
CTSD-205ENST00000438213 CABLES1Q8TDN4 633 aa22.9■■□□□ 1.26
CTSD-205ENST00000438213 AFF2P51816 1311 aa22.88■■□□□ 1.25
CTSD-205ENST00000438213 HDGFL2Q7Z4V5 671 aaPredicted RBP22.87■■□□□ 1.25
CTSD-205ENST00000438213 SLC12A5Q9H2X9 1139 aa22.87■■□□□ 1.25
CTSD-205ENST00000438213 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
CTSD-205ENST00000438213 TRPM3Q9HCF6 1732 aaPredicted RBP22.87■■□□□ 1.25
CTSD-205ENST00000438213 NLRP13Q86W25 1043 aa22.86■■□□□ 1.25
CTSD-205ENST00000438213 USP6P35125 1406 aa22.85■■□□□ 1.25
CTSD-205ENST00000438213 NUTM2GQ5VZR2 741 aa22.85■■□□□ 1.25
CTSD-205ENST00000438213 POTEAQ6S8J7 498 aa22.85■■□□□ 1.25
CTSD-205ENST00000438213 ILDR2Q71H61 639 aa22.85■■□□□ 1.25
CTSD-205ENST00000438213 HSPA5P11021 654 aaKnown RBP22.84■■□□□ 1.25
CTSD-205ENST00000438213 FNBP4Q8N3X1 1017 aaPredicted RBP22.84■■□□□ 1.25
CTSD-205ENST00000438213 KTN1Q86UP2 1357 aaKnown RBP22.84■■□□□ 1.25
CTSD-205ENST00000438213 NINLQ9Y2I6 1382 aa22.83■■□□□ 1.25
CTSD-205ENST00000438213 CPSF1Q10570 1443 aaKnown RBP22.82■■□□□ 1.24
CTSD-205ENST00000438213 ALS2Q96Q42 1657 aa22.82■■□□□ 1.24
CTSD-205ENST00000438213 USP21Q9UK80 565 aa22.82■■□□□ 1.24
CTSD-205ENST00000438213 TTC21BQ7Z4L5 1316 aa22.82■■□□□ 1.24
CTSD-205ENST00000438213 NLRP6P59044 892 aa22.81■■□□□ 1.24
CTSD-205ENST00000438213 QTRT2Q9H974 415 aaKnown RBP22.81■■□□□ 1.24
CTSD-205ENST00000438213 TTC21AQ8NDW8 1320 aa22.81■■□□□ 1.24
CTSD-205ENST00000438213 SSH2Q76I76 1423 aa22.79■■□□□ 1.24
CTSD-205ENST00000438213 FAM83GA6ND36 823 aa22.77■■□□□ 1.24
CTSD-205ENST00000438213 RXRBP28702 533 aa22.77■■□□□ 1.24
CTSD-205ENST00000438213 TRPC5Q9UL62 973 aaPredicted RBP22.77■■□□□ 1.24
CTSD-205ENST00000438213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.76■■□□□ 1.23
CTSD-205ENST00000438213 GCP02774 474 aa22.75■■□□□ 1.23
CTSD-205ENST00000438213 UNC5CLQ8IV45 518 aa22.75■■□□□ 1.23
CTSD-205ENST00000438213 PRDM11Q9NQV5 511 aa22.75■■□□□ 1.23
CTSD-205ENST00000438213 ZC3H6P61129 1189 aaKnown RBP22.74■■□□□ 1.23
CTSD-205ENST00000438213 USP19O94966 1318 aa22.74■■□□□ 1.23
CTSD-205ENST00000438213 CD163L1Q9NR16 1453 aa22.73■■□□□ 1.23
CTSD-205ENST00000438213 RBM6P78332 1123 aaKnown RBP22.73■■□□□ 1.23
CTSD-205ENST00000438213 POLR3GLQ9BT43 218 aa22.73■■□□□ 1.23
CTSD-205ENST00000438213 MARF1Q9Y4F3 1742 aaKnown RBP22.73■■□□□ 1.23
CTSD-205ENST00000438213 A0A1W2PP64 1363 aa22.73■■□□□ 1.23
CTSD-205ENST00000438213 AKAP12Q02952 1782 aa22.73■■□□□ 1.23
CTSD-205ENST00000438213 EDC4Q6P2E9 1401 aaKnown RBP22.72■■□□□ 1.23
CTSD-205ENST00000438213 KCNH5Q8NCM2 988 aa22.71■■□□□ 1.23
CTSD-205ENST00000438213 ANKRD36BQ8N2N9 1353 aa22.71■■□□□ 1.23
CTSD-205ENST00000438213 BCL9LQ86UU0 1499 aa22.71■■□□□ 1.23
CTSD-205ENST00000438213 SLIT2O94813 1529 aa22.7■■□□□ 1.22
CTSD-205ENST00000438213 KIAA0232Q92628 1395 aa22.69■■□□□ 1.22
CTSD-205ENST00000438213 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
CTSD-205ENST00000438213 ABCA3Q99758 1704 aa22.68■■□□□ 1.22
CTSD-205ENST00000438213 NME9Q86XW9 330 aa22.68■■□□□ 1.22
CTSD-205ENST00000438213 CHRNA2Q15822 529 aa22.67■■□□□ 1.22
CTSD-205ENST00000438213 ATRNO75882 1429 aa22.66■■□□□ 1.22
CTSD-205ENST00000438213 CPDO75976 1380 aa22.66■■□□□ 1.22
CTSD-205ENST00000438213 USP31Q70CQ4 1352 aa22.66■■□□□ 1.22
CTSD-205ENST00000438213 MON2Q7Z3U7 1717 aa22.66■■□□□ 1.22
CTSD-205ENST00000438213 GJD4Q96KN9 370 aaPredicted RBP22.66■■□□□ 1.22
CTSD-205ENST00000438213 VPS72Q15906 364 aa22.65■■□□□ 1.22
CTSD-205ENST00000438213 ZRANB1Q9UGI0 708 aa22.65■■□□□ 1.22
CTSD-205ENST00000438213 CCDC9Q9Y3X0 531 aaKnown RBP22.65■■□□□ 1.22
CTSD-205ENST00000438213 CRYBG1Q9Y4K1 1723 aa22.65■■□□□ 1.22
CTSD-205ENST00000438213 PIK3C2AO00443 1686 aa22.63■■□□□ 1.21
CTSD-205ENST00000438213 ZBTB7CA1YPR0 619 aa22.63■■□□□ 1.21
CTSD-205ENST00000438213 SOCS7O14512 581 aa22.63■■□□□ 1.21
CTSD-205ENST00000438213 SOX12O15370 315 aa22.63■■□□□ 1.21
CTSD-205ENST00000438213 EVA1CP58658 441 aa22.63■■□□□ 1.21
CTSD-205ENST00000438213 COG3Q96JB2 828 aa22.63■■□□□ 1.21
CTSD-205ENST00000438213 COL14A1Q05707 1796 aaKnown RBP22.63■■□□□ 1.21
CTSD-205ENST00000438213 PHRF1Q9P1Y6 1649 aaKnown RBP22.62■■□□□ 1.21
CTSD-205ENST00000438213 C11orf95C9JLR9 678 aaPredicted RBP22.62■■□□□ 1.21
CTSD-205ENST00000438213 NRKQ7Z2Y5 1582 aa22.62■■□□□ 1.21
CTSD-205ENST00000438213 SLIT3O75094 1523 aa22.61■■□□□ 1.21
CTSD-205ENST00000438213 NWD2Q9ULI1 1742 aa22.6■■□□□ 1.21
CTSD-205ENST00000438213 ARHGEF25Q86VW2 580 aa22.6■■□□□ 1.21
CTSD-205ENST00000438213 CARD14Q9BXL6 1004 aa22.6■■□□□ 1.21
CTSD-205ENST00000438213 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
CTSD-205ENST00000438213 FYB1O15117 783 aa22.59■■□□□ 1.21
CTSD-205ENST00000438213 STRN4Q9NRL3 753 aa22.59■■□□□ 1.21
CTSD-205ENST00000438213 AATKQ6ZMQ8 1374 aa22.58■■□□□ 1.21
CTSD-205ENST00000438213 PLCH1Q4KWH8 1693 aa22.58■■□□□ 1.2
CTSD-205ENST00000438213 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.57■■□□□ 1.2
CTSD-205ENST00000438213 GGNBP2Q9H3C7 697 aa22.56■■□□□ 1.2
CTSD-205ENST00000438213 PANK3Q9H999 370 aa22.56■■□□□ 1.2
CTSD-205ENST00000438213 CGNL1Q0VF96 1302 aa22.55■■□□□ 1.2
CTSD-205ENST00000438213 KIF7Q2M1P5 1343 aa22.55■■□□□ 1.2
CTSD-205ENST00000438213 NSD3Q9BZ95 1437 aa22.54■■□□□ 1.2
CTSD-205ENST00000438213 SPATA31A5Q5VU36 1347 aa22.54■■□□□ 1.2
CTSD-205ENST00000438213 SPATA31A7Q8IWB4 1347 aa22.54■■□□□ 1.2
CTSD-205ENST00000438213 ONECUT3O60422 494 aaPredicted RBP22.53■■□□□ 1.2
CTSD-205ENST00000438213 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
CTSD-205ENST00000438213 OVOS2A0A0J9YW53 1432 aa22.53■■□□□ 1.2
CTSD-205ENST00000438213 OVOS2Q6IE36 1432 aa22.53■■□□□ 1.2
CTSD-205ENST00000438213 CAMTA1Q9Y6Y1 1673 aa22.52■■□□□ 1.2
CTSD-205ENST00000438213 MYOM1P52179 1685 aa22.52■■□□□ 1.2
CTSD-205ENST00000438213 LARP1Q6PKG0 1096 aaKnown RBP22.51■■□□□ 1.19
CTSD-205ENST00000438213 AXIN2Q9Y2T1 843 aa22.51■■□□□ 1.19
CTSD-205ENST00000438213 RGS12O14924 1447 aa22.5■■□□□ 1.19
CTSD-205ENST00000438213 USP54Q70EL1 1684 aa22.5■■□□□ 1.19
CTSD-205ENST00000438213 SEPT12Q8IYM1 358 aa22.5■■□□□ 1.19
CTSD-205ENST00000438213 NFAT5O94916 1531 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms