RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 ARHGEF40Q8TER5 1519 aa16.2■□□□□ 0.18
LINC01090-202ENST00000434418 KIF14Q15058 1648 aa16.2■□□□□ 0.18
LINC01090-202ENST00000434418 SLC4A3P48751 1232 aa16.2■□□□□ 0.18
LINC01090-202ENST00000434418 ADAMTSL3P82987 1691 aa16.19■□□□□ 0.18
LINC01090-202ENST00000434418 PPP4CP60510 307 aa16.19■□□□□ 0.18
LINC01090-202ENST00000434418 CFHP08603 1231 aa16.18■□□□□ 0.18
LINC01090-202ENST00000434418 MYO5CQ9NQX4 1742 aa16.18■□□□□ 0.18
LINC01090-202ENST00000434418 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
LINC01090-202ENST00000434418 BCORL1Q5H9F3 1711 aa16.17■□□□□ 0.18
LINC01090-202ENST00000434418 ARID4BQ4LE39 1312 aaPredicted RBP16.17■□□□□ 0.18
LINC01090-202ENST00000434418 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
LINC01090-202ENST00000434418 ZMYM4Q5VZL5 1548 aa16.15■□□□□ 0.18
LINC01090-202ENST00000434418 PLCH2O75038 1416 aa16.15■□□□□ 0.18
LINC01090-202ENST00000434418 APLP1P51693 650 aa16.15■□□□□ 0.18
LINC01090-202ENST00000434418 BEGAINQ9BUH8 593 aa16.15■□□□□ 0.18
LINC01090-202ENST00000434418 FAM117AQ9C073 453 aa16.15■□□□□ 0.18
LINC01090-202ENST00000434418 PTPRMP28827 1452 aa16.15■□□□□ 0.18
LINC01090-202ENST00000434418 SIGLEC1Q9BZZ2 1709 aa16.14■□□□□ 0.17
LINC01090-202ENST00000434418 YEATS2Q9ULM3 1422 aa16.14■□□□□ 0.17
LINC01090-202ENST00000434418 ZFYVE16Q7Z3T8 1539 aa16.14■□□□□ 0.17
LINC01090-202ENST00000434418 TROQ12816 1431 aaPredicted RBP16.13■□□□□ 0.17
LINC01090-202ENST00000434418 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
LINC01090-202ENST00000434418 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
LINC01090-202ENST00000434418 SCAPERQ9BY12 1400 aa16.12■□□□□ 0.17
LINC01090-202ENST00000434418 GCGRP47871 477 aa16.12■□□□□ 0.17
LINC01090-202ENST00000434418 CLIP1P30622 1438 aa16.11■□□□□ 0.17
LINC01090-202ENST00000434418 RSPH4AQ5TD94 716 aa16.11■□□□□ 0.17
LINC01090-202ENST00000434418 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
LINC01090-202ENST00000434418 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
LINC01090-202ENST00000434418 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
LINC01090-202ENST00000434418 EFCAB2Q5VUJ9 269 aa16.08■□□□□ 0.16
LINC01090-202ENST00000434418 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
LINC01090-202ENST00000434418 KMT5BQ4FZB7 885 aa16.07■□□□□ 0.16
LINC01090-202ENST00000434418 HCSTQ9UBK5 93 aa16.07■□□□□ 0.16
LINC01090-202ENST00000434418 CCDC18Q5T9S5 1454 aa16.07■□□□□ 0.16
LINC01090-202ENST00000434418 MAGI2Q86UL8 1455 aa16.07■□□□□ 0.16
LINC01090-202ENST00000434418 CDC42BPBQ9Y5S2 1711 aa16.06■□□□□ 0.16
LINC01090-202ENST00000434418 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
LINC01090-202ENST00000434418 FYCO1Q9BQS8 1478 aa16.05■□□□□ 0.16
LINC01090-202ENST00000434418 FUT2Q10981 343 aa16.05■□□□□ 0.16
LINC01090-202ENST00000434418 IL27Q8NEV9 243 aa16.05■□□□□ 0.16
LINC01090-202ENST00000434418 PREX2Q70Z35 1606 aa16.05■□□□□ 0.16
LINC01090-202ENST00000434418 KDM4AO75164 1064 aa16.04■□□□□ 0.16
LINC01090-202ENST00000434418 MLECQ14165 292 aa16.04■□□□□ 0.16
LINC01090-202ENST00000434418 PLSCR2Q9NRY7 297 aa16.04■□□□□ 0.16
LINC01090-202ENST00000434418 ACTN4O43707 911 aaKnown RBP16.03■□□□□ 0.16
LINC01090-202ENST00000434418 SPIRE2Q8WWL2 714 aa16.03■□□□□ 0.16
LINC01090-202ENST00000434418 HLA-CQ95604 372 aa16.03■□□□□ 0.16
LINC01090-202ENST00000434418 ZNF518AQ6AHZ1 1483 aa16.03■□□□□ 0.16
LINC01090-202ENST00000434418 PUS10Q3MIT2 529 aaKnown RBP16.02■□□□□ 0.16
LINC01090-202ENST00000434418 TBC1D2Q9BYX2 928 aa16.02■□□□□ 0.16
LINC01090-202ENST00000434418 FER1L4A9Z1Z3 1794 aa16.02■□□□□ 0.15
LINC01090-202ENST00000434418 KDM5CP41229 1560 aa16.01■□□□□ 0.15
LINC01090-202ENST00000434418 NYAP1Q6ZVC0 841 aa16.01■□□□□ 0.15
LINC01090-202ENST00000434418 NUTM1Q86Y26 1132 aa16.01■□□□□ 0.15
LINC01090-202ENST00000434418 AFAP1Q8N556 730 aa16.01■□□□□ 0.15
LINC01090-202ENST00000434418 DDRGK1Q96HY6 314 aa16.01■□□□□ 0.15
LINC01090-202ENST00000434418 C9orf84Q5VXU9 1444 aa16.01■□□□□ 0.15
LINC01090-202ENST00000434418 CDC42BPAQ5VT25 1732 aa16■□□□□ 0.15
LINC01090-202ENST00000434418 ATP10AO60312 1499 aa16■□□□□ 0.15
LINC01090-202ENST00000434418 LMTK3Q96Q04 1460 aa16■□□□□ 0.15
LINC01090-202ENST00000434418 PRR14Q9BWN1 585 aa16■□□□□ 0.15
LINC01090-202ENST00000434418 ABCC1P33527 1531 aa15.99■□□□□ 0.15
LINC01090-202ENST00000434418 PCDHB3Q9Y5E6 796 aa15.99■□□□□ 0.15
LINC01090-202ENST00000434418 ITSN2Q9NZM3 1697 aa15.99■□□□□ 0.15
LINC01090-202ENST00000434418 HOXA2O43364 376 aa15.98■□□□□ 0.15
LINC01090-202ENST00000434418 DIP2CQ9Y2E4 1556 aa15.98■□□□□ 0.15
LINC01090-202ENST00000434418 ARHGEF12Q9NZN5 1544 aa15.98■□□□□ 0.15
LINC01090-202ENST00000434418 ABCA6Q8N139 1617 aa15.97■□□□□ 0.15
LINC01090-202ENST00000434418 COPS2P61201 443 aa15.97■□□□□ 0.15
LINC01090-202ENST00000434418 GUCA2AQ02747 115 aa15.97■□□□□ 0.15
LINC01090-202ENST00000434418 BLOC1S3Q6QNY0 202 aa15.97■□□□□ 0.15
LINC01090-202ENST00000434418 TRAPPC8Q9Y2L5 1435 aa15.96■□□□□ 0.15
LINC01090-202ENST00000434418 MOXD2PA6NHM9 499 aa15.96■□□□□ 0.15
LINC01090-202ENST00000434418 NDUFV2P19404 249 aa15.95■□□□□ 0.14
LINC01090-202ENST00000434418 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
LINC01090-202ENST00000434418 MYSM1Q5VVJ2 828 aa15.95■□□□□ 0.14
LINC01090-202ENST00000434418 MTRQ99707 1265 aa15.94■□□□□ 0.14
LINC01090-202ENST00000434418 SAMD9LQ8IVG5 1584 aa15.93■□□□□ 0.14
LINC01090-202ENST00000434418 USP46P62068 366 aa15.93■□□□□ 0.14
LINC01090-202ENST00000434418 MORN1Q5T089 497 aa15.93■□□□□ 0.14
LINC01090-202ENST00000434418 ZNF777Q9ULD5 760 aaPredicted RBP15.93■□□□□ 0.14
LINC01090-202ENST00000434418 MLH3Q9UHC1 1453 aa15.92■□□□□ 0.14
LINC01090-202ENST00000434418 HSPA2P54652 639 aa15.92■□□□□ 0.14
LINC01090-202ENST00000434418 SYCP2Q9BX26 1530 aa15.92■□□□□ 0.14
LINC01090-202ENST00000434418 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
LINC01090-202ENST00000434418 CEP162Q5TB80 1403 aa15.91■□□□□ 0.14
LINC01090-202ENST00000434418 KIDINS220Q9ULH0 1771 aa15.9■□□□□ 0.14
LINC01090-202ENST00000434418 TJAP1Q5JTD0 557 aa15.9■□□□□ 0.14
LINC01090-202ENST00000434418 SLC27A5Q9Y2P5 690 aa15.9■□□□□ 0.14
LINC01090-202ENST00000434418 REREQ9P2R6 1566 aa15.9■□□□□ 0.14
LINC01090-202ENST00000434418 CEBPAP49715 358 aaPredicted RBP15.89■□□□□ 0.13
LINC01090-202ENST00000434418 ZNF516Q92618 1163 aa15.89■□□□□ 0.13
LINC01090-202ENST00000434418 POLR3EQ9NVU0 708 aa15.89■□□□□ 0.13
LINC01090-202ENST00000434418 LIMD1Q9UGP4 676 aa15.89■□□□□ 0.13
LINC01090-202ENST00000434418 MTUS2Q5JR59 1369 aa15.88■□□□□ 0.13
LINC01090-202ENST00000434418 DIXDC1Q155Q3 683 aa15.87■□□□□ 0.13
LINC01090-202ENST00000434418 GRIPAP1Q4V328 841 aa15.87■□□□□ 0.13
LINC01090-202ENST00000434418 SH3D19Q5HYK7 790 aa15.87■□□□□ 0.13
LINC01090-202ENST00000434418 RSBN1LQ6PCB5 846 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms