RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 MRE11P49959 708 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 CLASRPQ8N2M8 674 aaKnown RBP8.45□□□□□ -1.06
CPS1-203ENST00000430249 MAP7D2Q96T17 732 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 SPG7Q9UQ90 795 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 RTEL1-TNFRSF6BF6WH68 1400 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 GNAI2P04899 355 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 APPP05067 770 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 CYB5RLQ6IPT4 315 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 DACH1Q9UI36 760 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 PTPN23Q9H3S7 1636 aa8.45□□□□□ -1.06
CPS1-203ENST00000430249 TATP17735 454 aaPredicted RBP8.45□□□□□ -1.06
CPS1-203ENST00000430249 FOXD4L1Q9NU39 408 aa8.44□□□□□ -1.06
CPS1-203ENST00000430249 PES1O00541 588 aaKnown RBP8.44□□□□□ -1.06
CPS1-203ENST00000430249 AKNAQ7Z591 1439 aa8.44□□□□□ -1.06
CPS1-203ENST00000430249 JMYQ8N9B5 988 aa8.44□□□□□ -1.06
CPS1-203ENST00000430249 CCDC43Q96MW1 224 aaKnown RBP8.44□□□□□ -1.06
CPS1-203ENST00000430249 PCMTD1Q96MG8 357 aaPredicted RBP8.44□□□□□ -1.06
CPS1-203ENST00000430249 BIVM-ERCC5R4GMW8 1640 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 CAMSAP2Q08AD1 1489 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 TXLNAP40222 546 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 CREBRFQ8IUR6 639 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 SMARCE1Q969G3 411 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 BCL2L13Q9BXK5 485 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 ELL2O00472 640 aaPredicted RBP8.43□□□□□ -1.06
CPS1-203ENST00000430249 CIZ1Q9ULV3 898 aaPredicted RBP8.43□□□□□ -1.06
CPS1-203ENST00000430249 PCF11O94913 1555 aaKnown RBP8.43□□□□□ -1.06
CPS1-203ENST00000430249 PLIN1O60240 522 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 CCDC173Q0VFZ6 552 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 CCDC158Q5M9N0 1113 aa8.43□□□□□ -1.06
CPS1-203ENST00000430249 ZSCAN31Q96LW9 406 aaPredicted RBP8.43□□□□□ -1.06
CPS1-203ENST00000430249 ZNF644Q9H582 1327 aaPredicted RBP8.42□□□□□ -1.06
CPS1-203ENST00000430249 NLRP6P59044 892 aa8.42□□□□□ -1.06
CPS1-203ENST00000430249 CAVIN1Q6NZI2 390 aaKnown RBP8.42□□□□□ -1.06
CPS1-203ENST00000430249 CABP2Q9NPB3 220 aa8.42□□□□□ -1.06
CPS1-203ENST00000430249 FCHSD2O94868 740 aa8.42□□□□□ -1.06
CPS1-203ENST00000430249 MTHFSP49914 203 aa8.42□□□□□ -1.06
CPS1-203ENST00000430249 TCP11L2Q8N4U5 519 aa8.42□□□□□ -1.06
CPS1-203ENST00000430249 HSP90AA2PQ14568 343 aaPredicted RBP8.42□□□□□ -1.06
CPS1-203ENST00000430249 TWISTNBQ3B726 338 aaPredicted RBP8.42□□□□□ -1.06
CPS1-203ENST00000430249 FSD1Q9BTV5 496 aa8.42□□□□□ -1.06
CPS1-203ENST00000430249 PLEKHH1Q9ULM0 1364 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 CDKL5O76039 1030 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 NCOA1Q15788 1441 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 NUTM2FA1L443 756 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 FILIP1LQ4L180 1135 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 KRT32Q14532 448 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 NOM1Q5C9Z4 860 aaKnown RBP8.41□□□□□ -1.06
CPS1-203ENST00000430249 KCNH5Q8NCM2 988 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 NACAP1Q9BZK3 213 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 NLRP2Q9NX02 1062 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 DHX29Q7Z478 1369 aaKnown RBP8.41□□□□□ -1.06
CPS1-203ENST00000430249 TXNDC2Q86VQ3 553 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 RUFY1Q96T51 708 aa8.41□□□□□ -1.06
CPS1-203ENST00000430249 VPS37CA5D8V6 355 aaPredicted RBP8.4□□□□□ -1.06
CPS1-203ENST00000430249 WASHC4Q2M389 1173 aa8.4□□□□□ -1.06
CPS1-203ENST00000430249 GGNBP2Q9H3C7 697 aa8.4□□□□□ -1.06
CPS1-203ENST00000430249 LUC7LQ9NQ29 371 aaKnown RBP8.4□□□□□ -1.06
CPS1-203ENST00000430249 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
CPS1-203ENST00000430249 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.06
CPS1-203ENST00000430249 HOMER1Q86YM7 354 aa8.4□□□□□ -1.07
CPS1-203ENST00000430249 RPAP2Q8IXW5 612 aaPredicted RBP8.4□□□□□ -1.07
CPS1-203ENST00000430249 WASF1Q92558 559 aa8.4□□□□□ -1.07
CPS1-203ENST00000430249 CDK19Q9BWU1 502 aa8.4□□□□□ -1.07
CPS1-203ENST00000430249 ITSN2Q9NZM3 1697 aa8.4□□□□□ -1.07
CPS1-203ENST00000430249 TTC39AQ5SRH9 613 aa8.4□□□□□ -1.07
CPS1-203ENST00000430249 ABTB2Q8N961 1025 aa8.4□□□□□ -1.07
CPS1-203ENST00000430249 ALDH1L2Q3SY69 923 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 LRRCC1Q9C099 1032 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 TSPY26PQ9H489 355 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 WDR33Q9C0J8 1336 aaKnown RBP8.39□□□□□ -1.07
CPS1-203ENST00000430249 CBFA2T2O43439 604 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 RAB11FIP3O75154 756 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 PRKAR2BP31323 418 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 MNS1Q8NEH6 495 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 PRAM1Q96QH2 718 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 GRIN2AQ12879 1464 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 EPS15P42566 896 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 ANKLE2Q86XL3 938 aa8.39□□□□□ -1.07
CPS1-203ENST00000430249 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
CPS1-203ENST00000430249 KINO60870 393 aaKnown RBP8.38□□□□□ -1.07
CPS1-203ENST00000430249 HMGN5P82970 282 aaKnown RBP8.38□□□□□ -1.07
CPS1-203ENST00000430249 DCTN1Q14203 1278 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 NAIPQ13075 1403 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 MVPQ14764 893 aaKnown RBP8.38□□□□□ -1.07
CPS1-203ENST00000430249 CFAP70Q5T0N1 1121 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 FOXD4L5Q5VV16 416 aaPredicted RBP8.38□□□□□ -1.07
CPS1-203ENST00000430249 FOXD4L4Q8WXT5 416 aaPredicted RBP8.38□□□□□ -1.07
CPS1-203ENST00000430249 NEUROD6Q96NK8 337 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 LNPKQ9C0E8 428 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 CYP46A1Q9Y6A2 500 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 HMOX1P09601 288 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 NOL7Q9UMY1 257 aaKnown RBP8.38□□□□□ -1.07
CPS1-203ENST00000430249 NESP48681 1621 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 NUP160Q12769 1436 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 MSH5O43196 834 aa8.38□□□□□ -1.07
CPS1-203ENST00000430249 LRPPRCP42704 1394 aaKnown RBP8.37□□□□□ -1.07
CPS1-203ENST00000430249 HSP90B2PQ58FF3 399 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 PROSER2Q86WR7 435 aaPredicted RBP8.37□□□□□ -1.07
CPS1-203ENST00000430249 TRIM22Q8IYM9 498 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 FAM43AQ8N2R8 423 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms