RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 WNT7AO00755 349 aa5.35□□□□□ -1.55
PTPRC-208ENST00000427110 ST8SIA5O15466 376 aa5.35□□□□□ -1.55
PTPRC-208ENST00000427110 F12P00748 615 aaPredicted RBP5.35□□□□□ -1.55
PTPRC-208ENST00000427110 SH3BP2P78314 561 aa5.35□□□□□ -1.55
PTPRC-208ENST00000427110 CTDSPL2Q05D32 466 aa5.35□□□□□ -1.55
PTPRC-208ENST00000427110 TUSC1Q2TAM9 212 aa5.35□□□□□ -1.55
PTPRC-208ENST00000427110 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPRC-208ENST00000427110 TOR4AQ9NXH8 423 aa5.35□□□□□ -1.55
PTPRC-208ENST00000427110 J3QL48 77 aa5.34□□□□□ -1.55
PTPRC-208ENST00000427110 MYT1Q01538 1121 aa5.34□□□□□ -1.55
PTPRC-208ENST00000427110 HELBQ8NG08 1087 aaPredicted RBP5.34□□□□□ -1.55
PTPRC-208ENST00000427110 LRRN4Q8WUT4 740 aa5.34□□□□□ -1.55
PTPRC-208ENST00000427110 WNT7BP56706 349 aa5.33□□□□□ -1.56
PTPRC-208ENST00000427110 EHBP1Q8NDI1 1231 aa5.33□□□□□ -1.56
PTPRC-208ENST00000427110 FOXJ1Q92949 421 aa5.33□□□□□ -1.56
PTPRC-208ENST00000427110 AP1G2O75843 785 aa5.32□□□□□ -1.56
PTPRC-208ENST00000427110 DGAT1O75907 488 aa5.32□□□□□ -1.56
PTPRC-208ENST00000427110 ALDH1A1P00352 501 aa5.32□□□□□ -1.56
PTPRC-208ENST00000427110 SMPD1P17405 629 aa5.32□□□□□ -1.56
PTPRC-208ENST00000427110 ZNF511Q8NB15 262 aa5.32□□□□□ -1.56
PTPRC-208ENST00000427110 SNIP1Q8TAD8 396 aaKnown RBP5.32□□□□□ -1.56
PTPRC-208ENST00000427110 TLL2Q9Y6L7 1015 aa5.32□□□□□ -1.56
PTPRC-208ENST00000427110 DACH1Q9UI36 760 aa5.31□□□□□ -1.56
PTPRC-208ENST00000427110 SIAH2O43255 324 aa5.3□□□□□ -1.56
PTPRC-208ENST00000427110 NR6A1Q15406 480 aa5.3□□□□□ -1.56
PTPRC-208ENST00000427110 C4orf48Q5BLP8 95 aa5.3□□□□□ -1.56
PTPRC-208ENST00000427110 PPP2R2DQ66LE6 453 aa5.3□□□□□ -1.56
PTPRC-208ENST00000427110 EPS8L1Q8TE68 723 aa5.3□□□□□ -1.56
PTPRC-208ENST00000427110 HPS1Q92902 700 aa5.3□□□□□ -1.56
PTPRC-208ENST00000427110 PCMTD1Q96MG8 357 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-208ENST00000427110 HMX1Q9NP08 348 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-208ENST00000427110 AAASQ9NRG9 546 aa5.3□□□□□ -1.56
PTPRC-208ENST00000427110 POTECB2RU33 542 aa5.29□□□□□ -1.56
PTPRC-208ENST00000427110 USP17L8P0C7I0 530 aa5.29□□□□□ -1.56
PTPRC-208ENST00000427110 RFC5P40937 340 aa5.29□□□□□ -1.56
PTPRC-208ENST00000427110 AGERQ15109 404 aa5.29□□□□□ -1.56
PTPRC-208ENST00000427110 MAGEB6P1A0A0J9YX57 407 aa5.28□□□□□ -1.56
PTPRC-208ENST00000427110 CARD14Q9BXL6 1004 aa5.28□□□□□ -1.56
PTPRC-208ENST00000427110 AXIN1O15169 862 aa5.27□□□□□ -1.57
PTPRC-208ENST00000427110 ARID5BQ14865 1188 aa5.27□□□□□ -1.57
PTPRC-208ENST00000427110 WASF2Q9Y6W5 498 aa5.27□□□□□ -1.57
PTPRC-208ENST00000427110 AVPP01185 164 aa5.26□□□□□ -1.57
PTPRC-208ENST00000427110 VARSP26640 1264 aaKnown RBP5.26□□□□□ -1.57
PTPRC-208ENST00000427110 ZNF787Q6DD87 383 aa5.26□□□□□ -1.57
PTPRC-208ENST00000427110 GOPCQ9HD26 462 aa5.26□□□□□ -1.57
PTPRC-208ENST00000427110 NBPF14Q5TI25 921 aa5.25□□□□□ -1.57
PTPRC-208ENST00000427110 FAM174AQ8TBP5 190 aa5.25□□□□□ -1.57
PTPRC-208ENST00000427110 FKBPLQ9UIM3 349 aa5.25□□□□□ -1.57
PTPRC-208ENST00000427110 BMP1P13497 986 aa5.24□□□□□ -1.57
PTPRC-208ENST00000427110 NNTQ13423 1086 aa5.24□□□□□ -1.57
PTPRC-208ENST00000427110 SH3BP5LQ7L8J4 393 aa5.24□□□□□ -1.57
PTPRC-208ENST00000427110 SH3RF1Q7Z6J0 888 aa5.24□□□□□ -1.57
PTPRC-208ENST00000427110 BPHLQ86WA6 291 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-208ENST00000427110 CRIPAKQ8N1N5 446 aa5.24□□□□□ -1.57
PTPRC-208ENST00000427110 ARMC2Q8NEN0 867 aa5.24□□□□□ -1.57
PTPRC-208ENST00000427110 TRIM34Q9BYJ4 488 aa5.24□□□□□ -1.57
PTPRC-208ENST00000427110 GMPR2Q9P2T1 348 aaKnown RBP5.24□□□□□ -1.57
PTPRC-208ENST00000427110 NR3C2P08235 984 aa5.23□□□□□ -1.57
PTPRC-208ENST00000427110 CTC1Q2NKJ3 1217 aa5.23□□□□□ -1.57
PTPRC-208ENST00000427110 ERFEQ4G0M1 354 aa5.23□□□□□ -1.57
PTPRC-208ENST00000427110 OCSTAMPQ9BR26 566 aa5.23□□□□□ -1.57
PTPRC-208ENST00000427110 ADH1CP00326 375 aa5.22□□□□□ -1.57
PTPRC-208ENST00000427110 FSHRP23945 695 aa5.22□□□□□ -1.57
PTPRC-208ENST00000427110 SMCPP49901 116 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-208ENST00000427110 TMEM259Q4ZIN3 620 aa5.22□□□□□ -1.57
PTPRC-208ENST00000427110 ARHGAP9Q9BRR9 750 aa5.22□□□□□ -1.57
PTPRC-208ENST00000427110 C1QTNF2Q9BXJ5 285 aa5.22□□□□□ -1.57
PTPRC-208ENST00000427110 ATP13A2Q9NQ11 1180 aa5.22□□□□□ -1.57
PTPRC-208ENST00000427110 SNRKQ9NRH2 765 aa5.22□□□□□ -1.57
PTPRC-208ENST00000427110 CAPN5O15484 640 aaPredicted RBP5.21□□□□□ -1.58
PTPRC-208ENST00000427110 GRM5P41594 1212 aa5.21□□□□□ -1.58
PTPRC-208ENST00000427110 WDR4P57081 412 aaKnown RBP5.21□□□□□ -1.58
PTPRC-208ENST00000427110 VASH1Q7L8A9 365 aaPredicted RBP5.21□□□□□ -1.58
PTPRC-208ENST00000427110 GJD4Q96KN9 370 aaPredicted RBP5.21□□□□□ -1.58
PTPRC-208ENST00000427110 CDK15Q96Q40 435 aa5.21□□□□□ -1.58
PTPRC-208ENST00000427110 ZFAND3Q9H8U3 227 aa5.21□□□□□ -1.58
PTPRC-208ENST00000427110 C11orf95C9JLR9 678 aaPredicted RBP5.2□□□□□ -1.58
PTPRC-208ENST00000427110 SNRPBP14678 240 aaKnown RBP5.2□□□□□ -1.58
PTPRC-208ENST00000427110 TIMP2P16035 220 aa5.2□□□□□ -1.58
PTPRC-208ENST00000427110 PDXDC2PQ6P474 469 aa5.2□□□□□ -1.58
PTPRC-208ENST00000427110 TRIM46Q7Z4K8 759 aa5.2□□□□□ -1.58
PTPRC-208ENST00000427110 MTMR14Q8NCE2 650 aa5.2□□□□□ -1.58
PTPRC-208ENST00000427110 ADAM32Q8TC27 787 aa5.2□□□□□ -1.58
PTPRC-208ENST00000427110 ITPKCQ96DU7 683 aa5.2□□□□□ -1.58
PTPRC-208ENST00000427110 ZIC2O95409 532 aaPredicted RBP5.19□□□□□ -1.58
PTPRC-208ENST00000427110 RAB15P59190 212 aa5.19□□□□□ -1.58
PTPRC-208ENST00000427110 ZBTB33Q86T24 672 aa5.19□□□□□ -1.58
PTPRC-208ENST00000427110 GPKOWQ92917 476 aaPredicted RBP eCLIP5.19□□□□□ -1.58
PTPRC-208ENST00000427110 PTK2Q05397 1052 aa5.18□□□□□ -1.58
PTPRC-208ENST00000427110 TRMT44Q8IYL2 757 aaKnown RBP5.18□□□□□ -1.58
PTPRC-208ENST00000427110 MPNDQ8N594 471 aa5.18□□□□□ -1.58
PTPRC-208ENST00000427110 ZNF775Q96BV0 537 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-208ENST00000427110 SLC10A4Q96EP9 437 aa5.18□□□□□ -1.58
PTPRC-208ENST00000427110 KLF16Q9BXK1 252 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-208ENST00000427110 ZC3H4Q9UPT8 1303 aaKnown RBP5.18□□□□□ -1.58
PTPRC-208ENST00000427110 GPR37L1O60883 481 aa5.17□□□□□ -1.58
PTPRC-208ENST00000427110 FBXO45P0C2W1 286 aa5.17□□□□□ -1.58
PTPRC-208ENST00000427110 NR5A1Q13285 461 aa5.16□□□□□ -1.58
PTPRC-208ENST00000427110 C6orf118Q5T5N4 469 aa5.16□□□□□ -1.58
PTPRC-208ENST00000427110 CCDC116Q8IYX3 515 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms