RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 CABLES1Q8TDN4 633 aa16.46■□□□□ 0.23
NCDN-204ENST00000423723 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
NCDN-204ENST00000423723 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
NCDN-204ENST00000423723 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
NCDN-204ENST00000423723 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
NCDN-204ENST00000423723 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
NCDN-204ENST00000423723 FAM83GA6ND36 823 aa16.44■□□□□ 0.22
NCDN-204ENST00000423723 PPIP5K1Q6PFW1 1433 aa16.44■□□□□ 0.22
NCDN-204ENST00000423723 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
NCDN-204ENST00000423723 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
NCDN-204ENST00000423723 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
NCDN-204ENST00000423723 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
NCDN-204ENST00000423723 GJD4Q96KN9 370 aaPredicted RBP16.42■□□□□ 0.22
NCDN-204ENST00000423723 SLC24A1O60721 1099 aa16.41■□□□□ 0.22
NCDN-204ENST00000423723 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
NCDN-204ENST00000423723 TESK2Q96S53 571 aa16.41■□□□□ 0.22
NCDN-204ENST00000423723 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
NCDN-204ENST00000423723 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.4■□□□□ 0.22
NCDN-204ENST00000423723 RGS12O14924 1447 aa16.4■□□□□ 0.22
NCDN-204ENST00000423723 CPSF1Q10570 1443 aaKnown RBP16.4■□□□□ 0.22
NCDN-204ENST00000423723 VPS72Q15906 364 aa16.4■□□□□ 0.22
NCDN-204ENST00000423723 USP19O94966 1318 aa16.4■□□□□ 0.22
NCDN-204ENST00000423723 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
NCDN-204ENST00000423723 ABCA3Q99758 1704 aa16.39■□□□□ 0.21
NCDN-204ENST00000423723 USP6P35125 1406 aa16.39■□□□□ 0.21
NCDN-204ENST00000423723 PAK3O75914 559 aaPredicted RBP16.39■□□□□ 0.21
NCDN-204ENST00000423723 CRYBG1Q9Y4K1 1723 aa16.39■□□□□ 0.21
NCDN-204ENST00000423723 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■■□ 22.5
NCDN-204ENST00000423723 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
NCDN-204ENST00000423723 HAP1P54257 671 aaPredicted RBP16.36■□□□□ 0.21
NCDN-204ENST00000423723 NLRP13Q86W25 1043 aa16.36■□□□□ 0.21
NCDN-204ENST00000423723 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
NCDN-204ENST00000423723 CPDO75976 1380 aa16.36■□□□□ 0.21
NCDN-204ENST00000423723 ST20-MTHFSA0A0A6YYL1 179 aa16.35■□□□□ 0.21
NCDN-204ENST00000423723 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
NCDN-204ENST00000423723 GCP02774 474 aa16.33■□□□□ 0.2
NCDN-204ENST00000423723 BTG4Q9NY30 223 aa16.33■□□□□ 0.2
NCDN-204ENST00000423723 TTC21BQ7Z4L5 1316 aa16.33■□□□□ 0.2
NCDN-204ENST00000423723 GLI3P10071 1580 aa16.33■□□□□ 0.2
NCDN-204ENST00000423723 COL14A1Q05707 1796 aaKnown RBP16.32■□□□□ 0.2
NCDN-204ENST00000423723 TTC21AQ8NDW8 1320 aa16.32■□□□□ 0.2
NCDN-204ENST00000423723 KIAA0232Q92628 1395 aa16.32■□□□□ 0.2
NCDN-204ENST00000423723 CD163L1Q9NR16 1453 aa16.31■□□□□ 0.2
NCDN-204ENST00000423723 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
NCDN-204ENST00000423723 EP400Q96L91 3159 aa16.31■□□□□ 0.2
NCDN-204ENST00000423723 SPATA31A5Q5VU36 1347 aa16.3■□□□□ 0.2
NCDN-204ENST00000423723 SPATA31A7Q8IWB4 1347 aa16.3■□□□□ 0.2
NCDN-204ENST00000423723 NLRP6P59044 892 aa16.3■□□□□ 0.2
NCDN-204ENST00000423723 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
NCDN-204ENST00000423723 PLCH1Q4KWH8 1693 aa16.3■□□□□ 0.2
NCDN-204ENST00000423723 USP31Q70CQ4 1352 aa16.29■□□□□ 0.2
NCDN-204ENST00000423723 NRAPQ86VF7 1730 aa16.29■□□□□ 0.2
NCDN-204ENST00000423723 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
NCDN-204ENST00000423723 SLC12A5Q9H2X9 1139 aa16.29■□□□□ 0.2
NCDN-204ENST00000423723 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
NCDN-204ENST00000423723 SLIT3O75094 1523 aa16.29■□□□□ 0.2
NCDN-204ENST00000423723 NINLQ9Y2I6 1382 aa16.28■□□□□ 0.2
NCDN-204ENST00000423723 ZC3H6P61129 1189 aaKnown RBP16.28■□□□□ 0.2
NCDN-204ENST00000423723 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.2
NCDN-204ENST00000423723 USP47Q96K76 1375 aa16.27■□□□□ 0.2
NCDN-204ENST00000423723 NRKQ7Z2Y5 1582 aa16.27■□□□□ 0.2
NCDN-204ENST00000423723 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
NCDN-204ENST00000423723 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
NCDN-204ENST00000423723 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
NCDN-204ENST00000423723 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
NCDN-204ENST00000423723 CHRNA2Q15822 529 aa16.26■□□□□ 0.19
NCDN-204ENST00000423723 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
NCDN-204ENST00000423723 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
NCDN-204ENST00000423723 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
NCDN-204ENST00000423723 SPATA31A1Q5TZJ5 1347 aa16.25■□□□□ 0.19
NCDN-204ENST00000423723 LMO7Q8WWI1 1683 aa16.25■□□□□ 0.19
NCDN-204ENST00000423723 CAMTA1Q9Y6Y1 1673 aa16.25■□□□□ 0.19
NCDN-204ENST00000423723 KCNH5Q8NCM2 988 aa16.25■□□□□ 0.19
NCDN-204ENST00000423723 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
NCDN-204ENST00000423723 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
NCDN-204ENST00000423723 EDC4Q6P2E9 1401 aaKnown RBP16.23■□□□□ 0.19
NCDN-204ENST00000423723 TMF1P82094 1093 aa16.23■□□□□ 0.19
NCDN-204ENST00000423723 BARGINQ6ZT62 677 aa16.23■□□□□ 0.19
NCDN-204ENST00000423723 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
NCDN-204ENST00000423723 MON2Q7Z3U7 1717 aa16.22■□□□□ 0.19
NCDN-204ENST00000423723 A0A1W2PP64 1363 aa16.22■□□□□ 0.19
NCDN-204ENST00000423723 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
NCDN-204ENST00000423723 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
NCDN-204ENST00000423723 THRAP3Q9Y2W1 955 aaKnown RBP16.21■□□□□ 0.19
NCDN-204ENST00000423723 USP54Q70EL1 1684 aa16.21■□□□□ 0.18
NCDN-204ENST00000423723 COL18A1P39060 1754 aa16.21■□□□□ 0.18
NCDN-204ENST00000423723 FAM98CQ17RN3 349 aaKnown RBP16.2■□□□□ 0.18
NCDN-204ENST00000423723 KRT27Q7Z3Y8 459 aa16.2■□□□□ 0.18
NCDN-204ENST00000423723 AXIN2Q9Y2T1 843 aa16.2■□□□□ 0.18
NCDN-204ENST00000423723 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
NCDN-204ENST00000423723 COL5A2P05997 1499 aaPredicted RBP16.19■□□□□ 0.18
NCDN-204ENST00000423723 NFAT5O94916 1531 aa16.19■□□□□ 0.18
NCDN-204ENST00000423723 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
NCDN-204ENST00000423723 EVA1CP58658 441 aa16.18■□□□□ 0.18
NCDN-204ENST00000423723 LARP1Q6PKG0 1096 aaKnown RBP16.18■□□□□ 0.18
NCDN-204ENST00000423723 NME9Q86XW9 330 aa16.18■□□□□ 0.18
NCDN-204ENST00000423723 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
NCDN-204ENST00000423723 THSD7AQ9UPZ6 1657 aa16.18■□□□□ 0.18
NCDN-204ENST00000423723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
NCDN-204ENST00000423723 STRN4Q9NRL3 753 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms