RNA–Protein interactions for RNA: ENST00000421851.1

RC3H1-IT1-201, RC3H1 intronic transcript 1, humanhuman

TSL 5 BASIC

Gene RC3H1-IT1, Length 448 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-IT1-201ENST00000421851 PIK3CDO00329 1044 aa10.43□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 SLC4A5Q9BY07 1137 aa10.43□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 NOVA2Q9UNW9 492 aaKnown RBP10.43□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 ELOAQ14241 798 aaKnown RBP10.42□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 TMEM164Q5U3C3 297 aa10.42□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 FKBPLQ9UIM3 349 aa10.42□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 GNEQ9Y223 722 aaKnown RBP10.42□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 DMRTA1Q5VZB9 504 aa10.41□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 STK32AQ8WU08 396 aa10.41□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 AXIN2Q9Y2T1 843 aa10.41□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 ACTN4O43707 911 aaKnown RBP10.4□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 USP17L2Q6R6M4 530 aa10.4□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 LAPTM4BQ86VI4 370 aa10.4□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 NFATC2IPQ8NCF5 419 aa10.4□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 DEPDC4Q8N2C3 294 aa10.39□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 USP17L5A8MUK1 530 aa10.38□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 LARP1Q6PKG0 1096 aaKnown RBP10.38□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 ZMIZ1Q9ULJ6 1067 aa10.38□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 VPS9D1Q9Y2B5 631 aa10.38□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 CTHP32929 405 aa10.37□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 VARS2Q5ST30 1063 aaKnown RBP10.37□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 PLA2G2EQ9NZK7 142 aa10.37□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 SLFNL1Q499Z3 407 aa10.36□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 RNF19BQ6ZMZ0 732 aa10.36□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 RASA1P20936 1047 aa10.35□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 ARID4AP29374 1257 aaPredicted RBP10.35□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 BLOC1S3Q6QNY0 202 aa10.35□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 LRCH3Q96II8 777 aa10.35□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 PRR14Q9BWN1 585 aa10.35□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 ZC3H4Q9UPT8 1303 aaKnown RBP10.34□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 TXNDC2Q86VQ3 553 aa10.34□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 MAP10Q9P2G4 905 aa10.34□□□□□ -0.75
RC3H1-IT1-201ENST00000421851 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L15C9J2P7 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L10C9JJH3 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L13C9JLJ4 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L12C9JPN9 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L11C9JVI0 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L21D6R901 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L18D6R9N7 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L22D6RA61 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L17D6RBQ6 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L19D6RCP7 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L20D6RJB6 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 USP17L24Q0WX57 530 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 BRICD5Q6PL45 260 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 RNF135Q8IUD6 432 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 FAM174AQ8TBP5 190 aa10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.33□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 FMNL1O95466 1100 aaPredicted RBP10.32□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 F12P00748 615 aaPredicted RBP10.32□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 PTK2Q05397 1052 aa10.32□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 CRTC2Q53ET0 693 aaPredicted RBP10.32□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 ZNF592Q92610 1267 aa10.32□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 CEP126Q9P2H0 1117 aa10.32□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 PCDHB9Q9Y5E1 797 aa10.32□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 ATP5J2-PTCD1G3V325 749 aa10.31□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 JUNDP17535 347 aa10.31□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 SSFA2P28290 1259 aa10.31□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 PBX2P40425 430 aa10.31□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 NCOA4Q13772 614 aa10.31□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 PHLDB3Q6NSJ2 640 aa10.31□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 CDCA7Q9BWT1 371 aaPredicted RBP10.31□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 PTPRNQ16849 979 aa10.3□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 SALL2Q9Y467 1007 aaPredicted RBP10.3□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 IGSF3O75054 1194 aa10.29□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 PPP4CP60510 307 aa10.29□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 PTK7Q13308 1070 aa10.29□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 ARMC2Q8NEN0 867 aa10.29□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 NR1I2O75469 434 aa10.28□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 ANKMY2Q8IV38 441 aa10.28□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 PLPP7Q8NBV4 271 aa10.28□□□□□ -0.76
RC3H1-IT1-201ENST00000421851 LZTS3O60299 673 aaPredicted RBP10.27□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 EML3Q32P44 896 aa10.27□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 GPSM3Q9Y4H4 160 aa10.27□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 ATP2B4P23634 1241 aa10.26□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 PDXDC2PQ6P474 469 aa10.26□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 BIN2Q9UBW5 565 aaPredicted RBP10.26□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 PCDHB3Q9Y5E6 796 aa10.26□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 SHROOM4Q9ULL8 1493 aa10.25□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 LOC105371045A0A1W2PR82 267 aa10.25□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 RBM47A0AV96 593 aaKnown RBP10.25□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 GOLGA8CPA6NN73 597 aa10.25□□□□□ -0.77
RC3H1-IT1-201ENST00000421851 ERCC3P19447 782 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms